data_U5H # _chem_comp.id U5H _chem_comp.name "(5~{S})-1-methyl-5-pyridin-3-yl-pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H12 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-22 _chem_comp.pdbx_modified_date 2022-02-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 176.215 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U5H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BNF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U5H C02 C1 C 0 1 N N N 3.967 -4.644 5.910 -2.235 0.153 -0.385 C02 U5H 1 U5H C04 C2 C 0 1 N N N 1.415 -4.341 5.430 -1.560 1.369 1.674 C04 U5H 2 U5H C05 C3 C 0 1 N N S 2.536 -6.560 6.138 -0.462 -0.801 0.772 C05 U5H 3 U5H C06 C4 C 0 1 Y N N 1.387 -6.893 7.057 0.886 -0.313 0.308 C06 U5H 4 U5H C07 C5 C 0 1 Y N N 1.158 -6.153 8.213 0.982 0.598 -0.728 C07 U5H 5 U5H C09 C6 C 0 1 Y N N -0.675 -7.436 8.764 3.282 0.614 -0.587 C09 U5H 6 U5H C10 C7 C 0 1 Y N N -0.510 -8.224 7.636 3.264 -0.291 0.456 C10 U5H 7 U5H C11 C8 C 0 1 Y N N 0.539 -7.946 6.760 2.046 -0.768 0.916 C11 U5H 8 U5H C12 C9 C 0 1 N N N 3.911 -6.860 6.805 -0.987 -1.903 -0.174 C12 U5H 9 U5H C13 C10 C 0 1 N N N 4.831 -5.754 6.312 -1.846 -1.084 -1.165 C13 U5H 10 U5H N03 N1 N 0 1 N N N 2.557 -5.156 5.818 -1.448 0.283 0.697 N03 U5H 11 U5H N08 N2 N 0 1 Y N N 0.149 -6.434 9.021 2.158 1.029 -1.140 N08 U5H 12 U5H O01 O1 O 0 1 N N N 4.292 -3.518 5.699 -3.125 0.917 -0.693 O01 U5H 13 U5H H1 H1 H 0 1 N N N 0.503 -4.956 5.443 -2.371 2.037 1.384 H1 U5H 14 U5H H2 H2 H 0 1 N N N 1.304 -3.506 6.137 -1.769 0.950 2.659 H2 U5H 15 U5H H3 H3 H 0 1 N N N 1.575 -3.944 4.417 -0.624 1.926 1.708 H3 U5H 16 U5H H4 H4 H 0 1 N N N 2.452 -7.159 5.219 -0.394 -1.180 1.792 H4 U5H 17 U5H H5 H5 H 0 1 N N N 1.817 -5.333 8.455 0.083 0.960 -1.205 H5 U5H 18 U5H H6 H6 H 0 1 N N N -1.489 -7.643 9.443 4.226 0.990 -0.952 H6 U5H 19 U5H H7 H7 H 0 1 N N N -1.185 -9.043 7.438 4.187 -0.627 0.904 H7 U5H 20 U5H H8 H8 H 0 1 N N N 0.686 -8.539 5.870 2.001 -1.476 1.731 H8 U5H 21 U5H H9 H9 H 0 1 N N N 3.824 -6.832 7.901 -0.165 -2.399 -0.689 H9 U5H 22 U5H H10 H10 H 0 1 N N N 4.287 -7.845 6.492 -1.598 -2.625 0.368 H10 U5H 23 U5H H11 H11 H 0 1 N N N 5.422 -6.106 5.454 -2.734 -1.646 -1.456 H11 U5H 24 U5H H12 H12 H 0 1 N N N 5.509 -5.436 7.118 -1.261 -0.812 -2.043 H12 U5H 25 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U5H C04 N03 SING N N 1 U5H O01 C02 DOUB N N 2 U5H N03 C02 SING N N 3 U5H N03 C05 SING N N 4 U5H C02 C13 SING N N 5 U5H C05 C12 SING N N 6 U5H C05 C06 SING N N 7 U5H C13 C12 SING N N 8 U5H C11 C06 DOUB Y N 9 U5H C11 C10 SING Y N 10 U5H C06 C07 SING Y N 11 U5H C10 C09 DOUB Y N 12 U5H C07 N08 DOUB Y N 13 U5H C09 N08 SING Y N 14 U5H C04 H1 SING N N 15 U5H C04 H2 SING N N 16 U5H C04 H3 SING N N 17 U5H C05 H4 SING N N 18 U5H C07 H5 SING N N 19 U5H C09 H6 SING N N 20 U5H C10 H7 SING N N 21 U5H C11 H8 SING N N 22 U5H C12 H9 SING N N 23 U5H C12 H10 SING N N 24 U5H C13 H11 SING N N 25 U5H C13 H12 SING N N 26 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U5H InChI InChI 1.03 "InChI=1S/C10H12N2O/c1-12-9(4-5-10(12)13)8-3-2-6-11-7-8/h2-3,6-7,9H,4-5H2,1H3/t9-/m0/s1" U5H InChIKey InChI 1.03 UIKROCXWUNQSPJ-VIFPVBQESA-N U5H SMILES_CANONICAL CACTVS 3.385 "CN1[C@@H](CCC1=O)c2cccnc2" U5H SMILES CACTVS 3.385 "CN1[CH](CCC1=O)c2cccnc2" U5H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1[C@@H](CCC1=O)c2cccnc2" U5H SMILES "OpenEye OEToolkits" 2.0.7 "CN1C(CCC1=O)c2cccnc2" # _pdbx_chem_comp_identifier.comp_id U5H _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{S})-1-methyl-5-pyridin-3-yl-pyrrolidin-2-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U5H "Create component" 2021-01-22 PDBE U5H "Initial release" 2022-03-02 RCSB ##