data_U5Y # _chem_comp.id U5Y _chem_comp.name "(12S,15S)-N-[(2-fluorophenyl)methyl]-10,13-dioxo-12-{2-oxo-2-[(2R)-2-phenylpyrrolidin-1-yl]ethyl}-2-oxa-11,14-diazatricyclo[15.2.2.1~3,7~]docosa-1(19),3(22),4,6,17,20-hexaene-15-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C39 H39 F N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-23 _chem_comp.pdbx_modified_date 2021-04-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 662.749 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U5Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6WNK _chem_comp.pdbx_subcomponent_list "HCI M6J TYR U5V" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U5Y C02 C10 C 0 1 N N N -143.398 -93.254 36.649 -0.725 0.821 -1.840 C1 HCI 1 U5Y O01 O1 O 0 1 N N N -144.575 -93.206 36.504 -0.170 1.513 -1.014 O1 HCI 2 U5Y C34 C25 C 0 1 N N N -142.755 -93.801 37.920 -1.946 1.321 -2.569 C2 HCI 3 U5Y C35 C26 C 0 1 N N N -142.076 -95.147 37.676 -1.981 2.851 -2.496 C3 HCI 4 U5Y C36 C27 C 0 1 Y N N -143.120 -96.238 37.902 -2.824 3.274 -1.321 "C1'" HCI 5 U5Y C37 C28 C 0 1 Y N N -143.959 -96.614 36.863 -2.661 2.660 -0.094 "C2'" HCI 6 U5Y C38 C29 C 0 1 Y N N -144.921 -97.589 37.073 -3.442 3.047 0.984 "C3'" HCI 7 U5Y C47 C37 C 0 1 Y N N -145.030 -98.183 38.323 -4.389 4.054 0.822 "C4'" HCI 8 U5Y C48 C38 C 0 1 Y N N -144.192 -97.805 39.362 -4.544 4.668 -0.404 "C5'" HCI 9 U5Y C49 C39 C 0 1 Y N N -143.236 -96.826 39.152 -3.761 4.278 -1.474 "C6'" HCI 10 U5Y C15 C3 C 0 1 N N N -138.422 -89.062 35.085 5.522 2.126 1.551 C13 M6J 11 U5Y C09 C15 C 0 1 Y N N -139.316 -89.721 32.770 6.010 0.377 -0.162 C15 M6J 12 U5Y C13 C2 C 0 1 Y N N -139.856 -88.777 30.631 6.795 0.606 -2.413 C17 M6J 13 U5Y C10 C1 C 0 1 Y N N -138.294 -90.449 32.188 6.962 -0.598 0.071 C20 M6J 14 U5Y C19 C20 C 0 1 N N N -143.526 -93.300 33.349 0.529 -1.791 -0.289 C04 M6J 15 U5Y C04 C11 C 0 1 N N S -143.179 -92.252 34.398 0.952 -0.829 -1.367 C06 M6J 16 U5Y C05 C12 C 0 1 N N N -142.179 -91.274 33.788 1.592 0.407 -0.733 C07 M6J 17 U5Y C06 C13 C 0 1 N N N -142.041 -89.942 34.510 2.962 0.054 -0.214 C08 M6J 18 U5Y C17 C4 C 0 1 N N N -140.438 -87.916 35.434 3.329 2.398 0.607 C11 M6J 19 U5Y C16 C19 C 0 1 N N N -139.080 -87.715 35.472 4.181 2.862 1.815 C12 M6J 20 U5Y C08 C14 C 0 1 N N R -139.562 -89.858 34.283 5.065 0.785 0.938 C14 M6J 21 U5Y C14 C18 C 0 1 Y N N -140.101 -88.883 31.990 5.928 0.981 -1.403 C16 M6J 22 U5Y C12 C17 C 0 1 Y N N -138.833 -89.508 30.051 7.744 -0.373 -2.181 C18 M6J 23 U5Y C11 C16 C 0 1 Y N N -138.049 -90.345 30.828 7.829 -0.972 -0.939 C19 M6J 24 U5Y N07 N2 N 0 1 N N N -140.726 -89.344 34.686 3.717 0.993 0.389 N10 M6J 25 U5Y N03 N1 N 0 1 N N N -142.551 -92.791 35.580 -0.253 -0.430 -2.135 N21 M6J 26 U5Y O33 O4 O 0 1 N N N -142.935 -94.323 33.267 -0.179 -2.738 -0.558 O05 M6J 27 U5Y O18 O2 O 0 1 N N N -143.011 -89.399 34.918 3.385 -1.076 -0.340 O09 M6J 28 U5Y N20 N3 N 0 1 N N N -144.612 -92.987 32.429 0.948 -1.589 0.992 N TYR 29 U5Y C21 C5 C 0 1 N N S -144.975 -93.921 31.385 0.523 -2.601 1.980 CA TYR 30 U5Y C22 C6 C 0 1 N N N -144.857 -93.135 30.090 -0.648 -3.378 1.435 C TYR 31 U5Y O32 O3 O 0 1 N N N -145.334 -92.054 30.023 -0.762 -4.559 1.687 O TYR 32 U5Y C44 C34 C 0 1 N N N -146.387 -94.454 31.657 0.109 -1.888 3.268 CB TYR 33 U5Y C43 C33 C 0 1 Y N N -146.262 -95.387 32.860 -0.786 -0.722 2.941 CG TYR 34 U5Y C42 C32 C 0 1 Y N N -146.673 -94.985 34.122 -1.911 -0.908 2.161 CD1 TYR 35 U5Y C45 C35 C 0 1 Y N N -145.685 -96.631 32.671 -0.475 0.538 3.420 CD2 TYR 36 U5Y C41 C31 C 0 1 Y N N -146.538 -95.852 35.195 -2.741 0.176 1.888 CE1 TYR 37 U5Y C46 C36 C 0 1 Y N N -145.540 -97.490 33.743 -1.294 1.627 3.142 CE2 TYR 38 U5Y C40 C30 C 0 1 Y N N -145.951 -97.100 35.006 -2.447 1.436 2.392 CZ TYR 39 U5Y O39 O5 O 0 1 N N N -145.795 -98.014 36.058 -3.301 2.469 2.199 OH TYR 40 U5Y C24 C7 C 0 1 N N N -143.989 -92.937 27.739 -2.753 -3.493 0.213 C24 U5V 41 U5Y C26 C8 C 0 1 Y N N -141.548 -92.259 27.760 -3.294 -2.349 -1.949 C26 U5V 42 U5Y C28 C9 C 0 1 Y N N -140.241 -92.372 27.305 -4.091 -1.517 -2.717 C28 U5V 43 U5Y C25 C21 C 0 1 Y N N -142.546 -93.061 27.227 -3.615 -2.582 -0.623 C25 U5V 44 U5Y C29 C22 C 0 1 Y N N -139.932 -93.284 26.304 -5.202 -0.916 -2.158 C29 U5V 45 U5Y C30 C23 C 0 1 Y N N -140.929 -94.088 25.773 -5.520 -1.146 -0.832 C30 U5V 46 U5Y C31 C24 C 0 1 Y N N -142.235 -93.979 26.233 -4.728 -1.981 -0.066 C31 U5V 47 U5Y F27 F1 F 0 1 N N N -141.861 -91.355 28.733 -2.207 -2.937 -2.494 F27 U5V 48 U5Y N23 N4 N 0 1 N N N -144.127 -93.696 28.970 -1.568 -2.761 0.668 N23 U5V 49 U5Y H23 H23 H 0 1 N N N -142.003 -93.082 38.277 -1.903 1.007 -3.612 H21 HCI 50 U5Y H24 H24 H 0 1 N N N -143.533 -93.928 38.687 -2.842 0.913 -2.102 H22 HCI 51 U5Y H25 H25 H 0 1 N N N -141.239 -95.278 38.378 -0.968 3.232 -2.373 H31 HCI 52 U5Y H26 H26 H 0 1 N N N -141.700 -95.196 36.643 -2.412 3.249 -3.415 H32 HCI 53 U5Y H27 H27 H 0 1 N N N -143.863 -96.148 35.893 -1.925 1.878 0.026 "H2'" HCI 54 U5Y H34 H34 H 0 1 N N N -145.775 -98.947 38.488 -5.003 4.356 1.657 "H4'" HCI 55 U5Y H35 H35 H 0 1 N N N -144.285 -98.273 40.331 -5.276 5.451 -0.528 "H5'" HCI 56 U5Y H36 H36 H 0 1 N N N -142.584 -96.522 39.958 -3.881 4.760 -2.433 "H6'" HCI 57 U5Y H3 H3 H 0 1 N N N -138.120 -89.619 35.984 6.135 2.684 0.844 H1 M6J 58 U5Y H4 H4 H 0 1 N N N -137.543 -88.894 34.445 6.062 1.963 2.483 H2 M6J 59 U5Y H2 H2 H 0 1 N N N -140.464 -88.123 30.023 6.731 1.077 -3.382 H3 M6J 60 U5Y H1 H1 H 0 1 N N N -137.684 -91.101 32.796 7.029 -1.066 1.041 H4 M6J 61 U5Y H11 H11 H 0 1 N N N -144.093 -91.704 34.672 1.667 -1.314 -2.032 H9 M6J 62 U5Y H12 H12 H 0 1 N N N -141.192 -91.759 33.781 1.679 1.196 -1.481 H10 M6J 63 U5Y H13 H13 H 0 1 N N N -142.494 -91.068 32.754 0.970 0.756 0.091 H11 M6J 64 U5Y H5 H5 H 0 1 N N N -140.919 -87.100 34.875 2.267 2.465 0.844 H12 M6J 65 U5Y H6 H6 H 0 1 N N N -140.838 -87.945 36.458 3.559 2.999 -0.273 H13 M6J 66 U5Y H18 H18 H 0 1 N N N -138.769 -87.418 36.484 3.736 2.537 2.755 H14 M6J 67 U5Y H19 H19 H 0 1 N N N -138.792 -86.932 34.755 4.320 3.943 1.803 H15 M6J 68 U5Y H14 H14 H 0 1 N N N -139.479 -90.921 34.553 5.037 0.014 1.708 H16 M6J 69 U5Y H17 H17 H 0 1 N N N -140.901 -88.315 32.442 5.187 1.745 -1.584 H17 M6J 70 U5Y H16 H16 H 0 1 N N N -138.646 -89.425 28.991 8.421 -0.665 -2.970 H18 M6J 71 U5Y H15 H15 H 0 1 N N N -137.250 -90.914 30.376 8.571 -1.737 -0.758 H19 M6J 72 U5Y H37 H37 H 0 1 N N N -141.555 -92.842 35.655 -0.671 -1.007 -2.793 H30 M6J 73 U5Y H38 H38 H 0 1 N N N -145.108 -92.124 32.519 1.494 -0.826 1.240 H TYR 74 U5Y H7 H7 H 0 1 N N N -144.269 -94.764 31.364 1.350 -3.280 2.188 HA TYR 75 U5Y H30 H30 H 0 1 N N N -147.071 -93.624 31.887 -0.425 -2.585 3.913 HB2 TYR 76 U5Y H31 H31 H 0 1 N N N -146.762 -95.006 30.783 0.999 -1.528 3.784 HB3 TYR 77 U5Y H29 H29 H 0 1 N N N -147.096 -94.002 34.268 -2.139 -1.888 1.768 HD1 TYR 78 U5Y H32 H32 H 0 1 N N N -145.349 -96.929 31.689 0.418 0.686 4.010 HD2 TYR 79 U5Y H28 H28 H 0 1 N N N -146.887 -95.560 36.174 -3.621 0.043 1.277 HE1 TYR 80 U5Y H33 H33 H 0 1 N N N -145.105 -98.468 33.596 -1.037 2.607 3.519 HE2 TYR 81 U5Y H8 H8 H 0 1 N N N -144.221 -91.879 27.931 -3.320 -3.838 1.077 H8 U5V 82 U5Y H9 H9 H 0 1 N N N -144.683 -93.333 26.983 -2.444 -4.350 -0.385 H9 U5V 83 U5Y H10 H10 H 0 1 N N N -139.465 -91.751 27.729 -3.843 -1.337 -3.753 H10 U5V 84 U5Y H20 H20 H 0 1 N N N -138.918 -93.367 25.940 -5.824 -0.267 -2.757 H20 U5V 85 U5Y H21 H21 H 0 1 N N N -140.689 -94.802 24.999 -6.389 -0.676 -0.396 H21 U5V 86 U5Y H22 H22 H 0 1 N N N -143.008 -94.608 25.818 -4.977 -2.160 0.970 H22 U5V 87 U5Y H39 H39 H 0 1 N N N -143.718 -94.606 29.045 -1.445 -1.832 0.416 H39 U5V 88 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U5Y C30 C31 DOUB Y N 1 U5Y C30 C29 SING Y N 2 U5Y C31 C25 SING Y N 3 U5Y C29 C28 DOUB Y N 4 U5Y C25 C24 SING N N 5 U5Y C25 C26 DOUB Y N 6 U5Y C28 C26 SING Y N 7 U5Y C24 N23 SING N N 8 U5Y C26 F27 SING N N 9 U5Y N23 C22 SING N N 10 U5Y O32 C22 DOUB N N 11 U5Y C12 C13 DOUB Y N 12 U5Y C12 C11 SING Y N 13 U5Y C22 C21 SING N N 14 U5Y C13 C14 SING Y N 15 U5Y C11 C10 DOUB Y N 16 U5Y C21 C44 SING N N 17 U5Y C21 N20 SING N N 18 U5Y C44 C43 SING N N 19 U5Y C14 C09 DOUB Y N 20 U5Y C10 C09 SING Y N 21 U5Y N20 C19 SING N N 22 U5Y C45 C43 DOUB Y N 23 U5Y C45 C46 SING Y N 24 U5Y C09 C08 SING N N 25 U5Y C43 C42 SING Y N 26 U5Y O33 C19 DOUB N N 27 U5Y C19 C04 SING N N 28 U5Y C46 C40 DOUB Y N 29 U5Y C05 C04 SING N N 30 U5Y C05 C06 SING N N 31 U5Y C42 C41 DOUB Y N 32 U5Y C08 N07 SING N N 33 U5Y C08 C15 SING N N 34 U5Y C04 N03 SING N N 35 U5Y C06 N07 SING N N 36 U5Y C06 O18 DOUB N N 37 U5Y N07 C17 SING N N 38 U5Y C40 C41 SING Y N 39 U5Y C40 O39 SING N N 40 U5Y C15 C16 SING N N 41 U5Y C17 C16 SING N N 42 U5Y N03 C02 SING N N 43 U5Y O39 C38 SING N N 44 U5Y O01 C02 DOUB N N 45 U5Y C02 C34 SING N N 46 U5Y C37 C38 DOUB Y N 47 U5Y C37 C36 SING Y N 48 U5Y C38 C47 SING Y N 49 U5Y C35 C36 SING N N 50 U5Y C35 C34 SING N N 51 U5Y C36 C49 DOUB Y N 52 U5Y C47 C48 DOUB Y N 53 U5Y C49 C48 SING Y N 54 U5Y C10 H1 SING N N 55 U5Y C13 H2 SING N N 56 U5Y C15 H3 SING N N 57 U5Y C15 H4 SING N N 58 U5Y C17 H5 SING N N 59 U5Y C17 H6 SING N N 60 U5Y C21 H7 SING N N 61 U5Y C24 H8 SING N N 62 U5Y C24 H9 SING N N 63 U5Y C28 H10 SING N N 64 U5Y C04 H11 SING N N 65 U5Y C05 H12 SING N N 66 U5Y C05 H13 SING N N 67 U5Y C08 H14 SING N N 68 U5Y C11 H15 SING N N 69 U5Y C12 H16 SING N N 70 U5Y C14 H17 SING N N 71 U5Y C16 H18 SING N N 72 U5Y C16 H19 SING N N 73 U5Y C29 H20 SING N N 74 U5Y C30 H21 SING N N 75 U5Y C31 H22 SING N N 76 U5Y C34 H23 SING N N 77 U5Y C34 H24 SING N N 78 U5Y C35 H25 SING N N 79 U5Y C35 H26 SING N N 80 U5Y C37 H27 SING N N 81 U5Y C41 H28 SING N N 82 U5Y C42 H29 SING N N 83 U5Y C44 H30 SING N N 84 U5Y C44 H31 SING N N 85 U5Y C45 H32 SING N N 86 U5Y C46 H33 SING N N 87 U5Y C47 H34 SING N N 88 U5Y C48 H35 SING N N 89 U5Y C49 H36 SING N N 90 U5Y N03 H37 SING N N 91 U5Y N20 H38 SING N N 92 U5Y N23 H39 SING N N 93 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U5Y SMILES ACDLabs 12.01 "C2(CCc1cccc(c1)Oc6ccc(CC(NC(C(N2)CC(N4CCCC4c3ccccc3)=O)=O)C(=O)NCc5c(F)cccc5)cc6)=O" U5Y InChI InChI 1.03 "InChI=1S/C39H39FN4O5/c40-32-13-5-4-11-29(32)25-41-38(47)33-23-27-15-18-30(19-16-27)49-31-12-6-8-26(22-31)17-20-36(45)42-34(39(48)43-33)24-37(46)44-21-7-14-35(44)28-9-2-1-3-10-28/h1-6,8-13,15-16,18-19,22,33-35H,7,14,17,20-21,23-25H2,(H,41,47)(H,42,45)(H,43,48)/t33-,34-,35+/m0/s1" U5Y InChIKey InChI 1.03 GSMYFOQUVZHNEZ-PUPDPRJKSA-N U5Y SMILES_CANONICAL CACTVS 3.385 "Fc1ccccc1CNC(=O)[C@@H]2Cc3ccc(Oc4cccc(CCC(=O)N[C@@H](CC(=O)N5CCC[C@@H]5c6ccccc6)C(=O)N2)c4)cc3" U5Y SMILES CACTVS 3.385 "Fc1ccccc1CNC(=O)[CH]2Cc3ccc(Oc4cccc(CCC(=O)N[CH](CC(=O)N5CCC[CH]5c6ccccc6)C(=O)N2)c4)cc3" U5Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@H]2CCCN2C(=O)C[C@H]3C(=O)N[C@@H](Cc4ccc(cc4)Oc5cccc(c5)CCC(=O)N3)C(=O)NCc6ccccc6F" U5Y SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C2CCCN2C(=O)CC3C(=O)NC(Cc4ccc(cc4)Oc5cccc(c5)CCC(=O)N3)C(=O)NCc6ccccc6F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier U5Y "SYSTEMATIC NAME" ACDLabs 12.01 "(12S,15S)-N-[(2-fluorophenyl)methyl]-10,13-dioxo-12-{2-oxo-2-[(2R)-2-phenylpyrrolidin-1-yl]ethyl}-2-oxa-11,14-diazatricyclo[15.2.2.1~3,7~]docosa-1(19),3(22),4,6,17,20-hexaene-15-carboxamide" U5Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(12~{S},15~{S})-~{N}-[(2-fluorophenyl)methyl]-10,13-bis(oxidanylidene)-12-[2-oxidanylidene-2-[(2~{R})-2-phenylpyrrolidin-1-yl]ethyl]-2-oxa-11,14-diazatricyclo[15.2.2.1^{3,7}]docosa-1(19),3(22),4,6,17,20-hexaene-15-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U5Y "Create component" 2020-04-23 RCSB U5Y "Initial release" 2021-04-28 RCSB ##