data_U6K # _chem_comp.id U6K _chem_comp.name "(2~{R},3~{R},4~{S},5~{R})-2-[(4~{a}~{S},7~{a}~{S})-4-azanyl-1,4,4~{a},7~{a}-tetrahydropyrrolo[2,3-d]pyrimidin-7-yl]-5-(quinolin-7-yloxymethyl)oxolane-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H23 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-25 _chem_comp.pdbx_modified_date 2022-02-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 397.428 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U6K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BO7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U6K C1 C1 C 0 1 N N R -37.277 -34.306 -3.552 -5.809 -0.866 0.761 C1 U6K 1 U6K C2 C2 C 0 1 N N N -35.617 -33.308 -2.333 -5.781 0.133 -1.438 C2 U6K 2 U6K C3 C3 C 0 1 N N S -34.881 -34.973 -3.772 -3.975 -1.434 -0.873 C3 U6K 3 U6K C4 C4 C 0 1 N N S -36.320 -35.191 -4.323 -4.884 -1.972 0.249 C4 U6K 4 U6K C5 C5 C 0 1 N N N -36.477 -36.696 -4.379 -3.855 -2.201 1.359 C5 U6K 5 U6K C6 C6 C 0 1 N N N -35.235 -37.289 -4.249 -2.763 -1.528 1.059 C6 U6K 6 U6K C8 C7 C 0 1 N N R -31.177 -37.539 -4.729 -0.006 1.322 -0.364 C8 U6K 7 U6K C11 C8 C 0 1 Y N N -28.283 -40.050 -7.279 3.922 0.746 1.055 C11 U6K 8 U6K C12 C9 C 0 1 Y N N -27.834 -41.022 -8.114 5.191 0.548 1.502 C12 U6K 9 U6K C13 C10 C 0 1 Y N N -28.728 -41.759 -8.923 6.110 -0.152 0.700 C13 U6K 10 U6K C14 C11 C 0 1 Y N N -28.291 -42.769 -9.806 7.431 -0.376 1.128 C14 U6K 11 U6K C15 C12 C 0 1 Y N N -29.201 -43.453 -10.537 8.270 -1.064 0.297 C15 U6K 12 U6K C16 C13 C 0 1 Y N N -30.560 -43.132 -10.385 7.808 -1.521 -0.934 C16 U6K 13 U6K C17 C14 C 0 1 Y N N -30.110 -41.490 -8.841 5.704 -0.644 -0.566 C17 U6K 14 U6K C20 C15 C 0 1 N N R -32.515 -37.686 -2.708 -2.311 1.538 0.393 C20 U6K 15 U6K N1 N1 N 0 1 N N N -38.612 -34.414 -3.862 -6.942 -1.489 1.458 N1 U6K 16 U6K N2 N2 N 0 1 N N N -36.928 -33.355 -2.709 -6.323 -0.010 -0.288 N2 U6K 17 U6K N3 N3 N 0 1 N N N -34.689 -34.213 -2.519 -4.668 -0.574 -1.795 N3 U6K 18 U6K N4 N4 N 0 1 N N N -34.347 -36.325 -3.795 -2.881 -0.809 -0.130 N4 U6K 19 U6K C7 C16 C 0 1 N N R -32.932 -36.504 -3.575 -2.072 0.338 -0.550 C7 U6K 20 U6K O1 O1 O 0 1 N N N -32.349 -36.694 -4.846 -0.665 0.038 -0.416 O1 U6K 21 U6K C9 C17 C 0 1 N N N -31.253 -38.662 -5.739 1.379 1.186 0.273 C9 U6K 22 U6K O2 O2 O 0 1 N N N -29.953 -38.769 -6.322 2.242 0.469 -0.611 O2 U6K 23 U6K C10 C18 C 0 1 Y N N -29.663 -39.782 -7.191 3.518 0.261 -0.193 C10 U6K 24 U6K N5 N5 N 0 1 Y N N -31.019 -42.197 -9.581 6.576 -1.311 -1.331 N5 U6K 25 U6K C18 C19 C 0 1 Y N N -30.565 -40.483 -7.956 4.386 -0.422 -0.996 C18 U6K 26 U6K C19 C20 C 0 1 N N S -31.120 -37.961 -3.252 -0.920 2.200 0.518 C19 U6K 27 U6K O3 O3 O 0 1 N N N -30.111 -37.192 -2.608 -0.957 3.540 0.022 O3 U6K 28 U6K O4 O4 O 0 1 N N N -32.497 -37.140 -1.380 -3.249 2.449 -0.184 O4 U6K 29 U6K H22 H1 H 0 1 N N N -37.365 -35.046 -2.743 -5.257 -0.252 1.473 H22 U6K 30 U6K H3 H2 H 0 1 N N N -35.306 -32.412 -1.817 -6.213 0.829 -2.143 H3 U6K 31 U6K H4 H3 H 0 1 N N N -34.350 -34.413 -4.556 -3.568 -2.282 -1.424 H4 U6K 32 U6K H5 H4 H 0 1 N N N -36.315 -34.830 -5.362 -5.425 -2.873 -0.040 H5 U6K 33 U6K H6 H5 H 0 1 N N N -37.412 -37.223 -4.501 -4.000 -2.809 2.239 H6 U6K 34 U6K H7 H6 H 0 1 N N N -34.998 -38.321 -4.463 -1.872 -1.533 1.668 H7 U6K 35 U6K H9 H7 H 0 1 N N N -30.280 -36.941 -4.946 0.078 1.746 -1.365 H9 U6K 36 U6K H12 H8 H 0 1 N N N -27.583 -39.483 -6.683 3.216 1.279 1.674 H12 U6K 37 U6K H13 H9 H 0 1 N N N -26.776 -41.235 -8.161 5.492 0.927 2.467 H13 U6K 38 U6K H14 H10 H 0 1 N N N -27.239 -42.994 -9.898 7.772 -0.014 2.086 H14 U6K 39 U6K H15 H11 H 0 1 N N N -28.890 -44.228 -11.222 9.290 -1.253 0.596 H15 U6K 40 U6K H16 H12 H 0 1 N N N -31.277 -43.691 -10.968 8.483 -2.063 -1.580 H16 U6K 41 U6K H20 H13 H 0 1 N N N -33.188 -38.548 -2.825 -2.662 1.196 1.366 H20 U6K 42 U6K H23 H14 H 0 1 N N N -39.139 -33.785 -3.291 -7.543 -0.790 1.867 H23 U6K 43 U6K H2 H15 H 0 1 N N N -38.750 -34.185 -4.826 -7.460 -2.093 0.837 H2 U6K 44 U6K H24 H17 H 0 1 N N N -33.934 -34.372 -1.883 -4.334 -0.493 -2.702 H24 U6K 45 U6K H8 H18 H 0 1 N N N -32.523 -35.590 -3.119 -2.307 0.611 -1.579 H8 U6K 46 U6K H11 H19 H 0 1 N N N -31.999 -38.428 -6.513 1.791 2.178 0.460 H11 U6K 47 U6K H10 H20 H 0 1 N N N -31.525 -39.604 -5.241 1.293 0.645 1.216 H10 U6K 48 U6K H17 H21 H 0 1 N N N -31.620 -40.266 -7.882 4.060 -0.790 -1.958 H17 U6K 49 U6K H18 H22 H 0 1 N N N -30.902 -39.037 -3.186 -0.581 2.184 1.554 H18 U6K 50 U6K H19 H23 H 0 1 N N N -30.060 -37.439 -1.692 -1.517 4.135 0.539 H19 U6K 51 U6K H21 H24 H 0 1 N N N -32.244 -37.816 -0.763 -3.414 3.236 0.353 H21 U6K 52 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U6K C15 C16 DOUB Y N 1 U6K C15 C14 SING Y N 2 U6K C16 N5 SING Y N 3 U6K C14 C13 DOUB Y N 4 U6K N5 C17 DOUB Y N 5 U6K C13 C17 SING Y N 6 U6K C13 C12 SING Y N 7 U6K C17 C18 SING Y N 8 U6K C12 C11 DOUB Y N 9 U6K C18 C10 DOUB Y N 10 U6K C11 C10 SING Y N 11 U6K C10 O2 SING N N 12 U6K O2 C9 SING N N 13 U6K C9 C8 SING N N 14 U6K O1 C8 SING N N 15 U6K O1 C7 SING N N 16 U6K C8 C19 SING N N 17 U6K C5 C4 SING N N 18 U6K C5 C6 DOUB N N 19 U6K C4 C3 SING N N 20 U6K C4 C1 SING N N 21 U6K C6 N4 SING N N 22 U6K N1 C1 SING N N 23 U6K N4 C3 SING N N 24 U6K N4 C7 SING N N 25 U6K C3 N3 SING N N 26 U6K C7 C20 SING N N 27 U6K C1 N2 SING N N 28 U6K C19 C20 SING N N 29 U6K C19 O3 SING N N 30 U6K N2 C2 DOUB N N 31 U6K C20 O4 SING N N 32 U6K N3 C2 SING N N 33 U6K C1 H22 SING N N 34 U6K C2 H3 SING N N 35 U6K C3 H4 SING N N 36 U6K C4 H5 SING N N 37 U6K C5 H6 SING N N 38 U6K C6 H7 SING N N 39 U6K C8 H9 SING N N 40 U6K C11 H12 SING N N 41 U6K C12 H13 SING N N 42 U6K C14 H14 SING N N 43 U6K C15 H15 SING N N 44 U6K C16 H16 SING N N 45 U6K C20 H20 SING N N 46 U6K N1 H23 SING N N 47 U6K N1 H2 SING N N 48 U6K N3 H24 SING N N 49 U6K C7 H8 SING N N 50 U6K C9 H11 SING N N 51 U6K C9 H10 SING N N 52 U6K C18 H17 SING N N 53 U6K C19 H18 SING N N 54 U6K O3 H19 SING N N 55 U6K O4 H21 SING N N 56 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U6K InChI InChI 1.03 "InChI=1S/C20H23N5O4/c21-18-13-5-7-25(19(13)24-10-23-18)20-17(27)16(26)15(29-20)9-28-12-4-3-11-2-1-6-22-14(11)8-12/h1-8,10,13,15-20,26-27H,9,21H2,(H,23,24)/t13-,15+,16+,17+,18+,19-,20+/m0/s1" U6K InChIKey InChI 1.03 ZIYBQKLKBCWPQZ-AUENAHFOSA-N U6K SMILES_CANONICAL CACTVS 3.385 "N[C@@H]1N=CN[C@@H]2[C@H]1C=CN2[C@@H]3O[C@H](COc4ccc5cccnc5c4)[C@@H](O)[C@H]3O" U6K SMILES CACTVS 3.385 "N[CH]1N=CN[CH]2[CH]1C=CN2[CH]3O[CH](COc4ccc5cccnc5c4)[CH](O)[CH]3O" U6K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2ccc(cc2nc1)OC[C@@H]3[C@H]([C@H]([C@@H](O3)N4C=C[C@@H]5[C@H]4NC=NC5N)O)O" U6K SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2ccc(cc2nc1)OCC3C(C(C(O3)N4C=CC5C4NC=NC5N)O)O" # _pdbx_chem_comp_identifier.comp_id U6K _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S},5~{R})-2-[(4~{a}~{S},7~{a}~{S})-4-azanyl-1,4,4~{a},7~{a}-tetrahydropyrrolo[2,3-d]pyrimidin-7-yl]-5-(quinolin-7-yloxymethyl)oxolane-3,4-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U6K "Create component" 2021-01-25 PDBE U6K "Initial release" 2022-03-02 RCSB ##