data_U6Z
#
_chem_comp.id U6Z
_chem_comp.name "1-[(~{E})-(5-nitrofuran-2-yl)methylideneamino]imidazolidine-2,4-dione"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C8 H6 N4 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms Nitrofurantoin
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-01-25
_chem_comp.pdbx_modified_date 2021-07-16
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 238.157
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code U6Z
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7NB9
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
U6Z O5 O1 O 0 1 N N N -1.339 -21.476 -14.654 -2.604 -2.371 -0.019 O5 U6Z 1
U6Z C8 C1 C 0 1 N N N -2.178 -20.825 -15.265 -3.000 -1.223 -0.009 C8 U6Z 2
U6Z N4 N1 N 0 1 N N N -2.811 -19.727 -14.869 -4.293 -0.882 -0.061 N4 U6Z 3
U6Z C1 C2 C 0 1 N N N -3.795 -19.271 -15.712 -4.456 0.455 -0.037 C1 U6Z 4
U6Z O1 O2 O 0 1 N N N -4.397 -18.221 -15.472 -5.502 1.067 -0.070 O1 U6Z 5
U6Z C2 C3 C 0 1 N N N -3.877 -20.130 -16.892 -3.058 1.037 0.042 C2 U6Z 6
U6Z N1 N2 N 0 1 N N N -2.716 -21.215 -16.421 -2.189 -0.153 0.059 N1 U6Z 7
U6Z N2 N3 N 0 1 N N N -2.401 -22.204 -17.097 -0.900 -0.165 0.121 N2 U6Z 8
U6Z C3 C4 C 0 1 N N N -3.037 -22.458 -18.311 -0.217 0.985 0.074 C3 U6Z 9
U6Z C4 C5 C 0 1 Y N N -2.658 -23.545 -19.037 1.163 0.967 0.035 C4 U6Z 10
U6Z O4 O3 O 0 1 Y N N -1.427 -24.162 -18.740 1.956 -0.129 0.038 O4 U6Z 11
U6Z C7 C6 C 0 1 Y N N -1.296 -25.211 -19.658 3.237 0.248 -0.009 C7 U6Z 12
U6Z N3 N4 N 1 1 N N N -0.198 -25.960 -19.602 4.398 -0.681 -0.021 N3 U6Z 13
U6Z O3 O4 O 0 1 N N N 0.646 -25.606 -18.722 5.624 -0.201 -0.068 O3 U6Z 14
U6Z O2 O5 O -1 1 N N N -0.093 -27.053 -20.356 4.201 -1.982 0.016 O2 U6Z 15
U6Z C6 C7 C 0 1 Y N N -2.367 -25.265 -20.452 3.326 1.642 -0.045 C6 U6Z 16
U6Z C5 C8 C 0 1 Y N N -3.201 -24.248 -20.054 2.057 2.140 -0.025 C5 U6Z 17
U6Z H1 H1 H 0 1 N N N -2.586 -19.262 -14.013 -5.023 -1.519 -0.110 H1 U6Z 18
U6Z H2 H2 H 0 1 N N N -3.610 -19.601 -17.819 -2.844 1.655 -0.830 H2 U6Z 19
U6Z H3 H3 H 0 1 N N N -4.867 -20.595 -17.008 -2.939 1.612 0.960 H3 U6Z 20
U6Z H4 H4 H 0 1 N N N -3.817 -21.803 -18.670 -0.745 1.927 0.066 H4 U6Z 21
U6Z H5 H5 H 0 1 N N N -2.544 -25.970 -21.251 4.237 2.220 -0.087 H5 U6Z 22
U6Z H6 H6 H 0 1 N N N -4.164 -24.039 -20.496 1.766 3.180 -0.043 H6 U6Z 23
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
U6Z C6 C5 SING Y N 1
U6Z C6 C7 DOUB Y N 2
U6Z O2 N3 SING N N 3
U6Z C5 C4 DOUB Y N 4
U6Z C7 N3 SING N N 5
U6Z C7 O4 SING Y N 6
U6Z N3 O3 DOUB N N 7
U6Z C4 O4 SING Y N 8
U6Z C4 C3 SING N N 9
U6Z C3 N2 DOUB N E 10
U6Z N2 N1 SING N N 11
U6Z C2 N1 SING N N 12
U6Z C2 C1 SING N N 13
U6Z N1 C8 SING N N 14
U6Z C1 O1 DOUB N N 15
U6Z C1 N4 SING N N 16
U6Z C8 N4 SING N N 17
U6Z C8 O5 DOUB N N 18
U6Z N4 H1 SING N N 19
U6Z C2 H2 SING N N 20
U6Z C2 H3 SING N N 21
U6Z C3 H4 SING N N 22
U6Z C6 H5 SING N N 23
U6Z C5 H6 SING N N 24
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
U6Z InChI InChI 1.03 "InChI=1S/C8H6N4O5/c13-6-4-11(8(14)10-6)9-3-5-1-2-7(17-5)12(15)16/h1-3H,4H2,(H,10,13,14)/b9-3+"
U6Z InChIKey InChI 1.03 NXFQHRVNIOXGAQ-YCRREMRBSA-N
U6Z SMILES_CANONICAL CACTVS 3.385 "O=C1CN(/N=C/c2oc(cc2)[N](=O)=O)C(=O)N1"
U6Z SMILES CACTVS 3.385 "O=C1CN(N=Cc2oc(cc2)[N](=O)=O)C(=O)N1"
U6Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(oc1/C=N/N2CC(=O)NC2=O)N(=O)=O"
U6Z SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(oc1C=NN2CC(=O)NC2=O)N(=O)=O"
#
_pdbx_chem_comp_identifier.comp_id U6Z
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "1-[(~{E})-(5-nitrofuran-2-yl)methylideneamino]imidazolidine-2,4-dione"
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id U6Z
_pdbx_chem_comp_synonyms.name Nitrofurantoin
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
U6Z "Create component" 2021-01-25 PDBE
U6Z "Initial release" 2021-07-21 RCSB
##