data_U8W # _chem_comp.id U8W _chem_comp.name "(2~{S},3~{S},4~{R})-2,3,4,5-tetrakis(oxidanyl)-6-phosphonooxy-hexane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H15 O11 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-03 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 326.215 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U8W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7NE2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U8W C4 C1 C 0 1 N N S N N N 0.855 -5.145 -0.880 1.103 -0.427 -0.626 C4 U8W 1 U8W C5 C2 C 0 1 N N S N N N 1.223 -6.293 -1.840 2.381 0.225 -0.094 C5 U8W 2 U8W C6 C3 C 0 1 N N N N N N 1.297 -7.693 -1.228 3.599 -0.540 -0.616 C6 U8W 3 U8W C3 C4 C 0 1 N N R N N N 1.058 -3.684 -1.545 -0.115 0.338 -0.103 C3 U8W 4 U8W O11 O1 O 0 1 N N N N N N 3.133 -9.023 -2.748 5.148 -0.151 1.521 O11 U8W 5 U8W S1 S1 S 0 1 N N N N N N 1.711 -8.975 -2.239 5.106 0.140 0.131 S1 U8W 6 U8W O9 O2 O 0 1 N N N N N N 1.757 -10.251 -1.464 6.233 -0.694 -0.461 O9 U8W 7 U8W O10 O3 O 0 1 N N N N N N 0.650 -9.144 -3.261 5.352 1.454 -0.350 O10 U8W 8 U8W O8 O4 O 0 1 N N N N N N 0.181 -6.348 -2.795 2.444 1.582 -0.537 O8 U8W 9 U8W O7 O5 O 0 1 N N N N N N 1.612 -5.603 0.334 1.040 -1.784 -0.182 O7 U8W 10 U8W O6 O6 O 0 1 N N N N N N 2.098 -3.206 -0.845 -0.060 0.403 1.323 O6 U8W 11 U8W C1 C5 C 0 1 N N S N N N -0.074 -2.672 -1.283 -1.393 -0.386 -0.532 C1 U8W 12 U8W C2 C6 C 0 1 N N N N N N -1.099 -2.255 -2.314 -2.605 0.307 0.094 C2 U8W 13 U8W O2 O7 O 0 1 N N N N N N -0.975 -2.952 -3.556 -3.805 -0.294 -0.398 O2 U8W 14 U8W P1 P1 P 0 1 N N N N N N -2.249 -3.502 -4.350 -5.274 0.186 0.051 P1 U8W 15 U8W O3 O8 O 0 1 N N N N N N -3.052 -2.258 -4.674 -5.527 1.691 -0.462 O3 U8W 16 U8W O4 O9 O 0 1 N N N N N N -3.026 -4.353 -3.412 -6.379 -0.793 -0.593 O4 U8W 17 U8W O5 O10 O 0 1 N N N N N N -1.660 -4.174 -5.593 -5.379 0.143 1.527 O5 U8W 18 U8W H1 H1 H 0 1 N N N N N N -0.218 -5.238 -0.658 1.108 -0.401 -1.715 H1 U8W 19 U8W H2 H2 H 0 1 N N N N N N 2.183 -6.060 -2.324 2.376 0.198 0.996 H2 U8W 20 U8W H3 H3 H 0 1 N N N N N N 0.307 -7.917 -0.803 3.507 -1.594 -0.354 H3 U8W 21 U8W H4 H4 H 0 1 N N N N N N 2.043 -7.658 -0.421 3.654 -0.439 -1.700 H4 U8W 22 U8W H5 H5 H 0 1 N N N N N N 1.250 -3.788 -2.623 -0.114 1.347 -0.514 H5 U8W 23 U8W H6 H6 H 0 1 N N N N N N 0.112 -7.231 -3.138 2.452 1.681 -1.499 H6 U8W 24 U8W H7 H7 H 0 1 N N N N N N 1.484 -4.981 1.041 1.032 -1.883 0.780 H7 U8W 25 U8W H8 H8 H 0 1 N N N N N N 2.846 -3.781 -0.956 -0.058 -0.461 1.757 H8 U8W 26 U8W H9 H9 H 0 1 N N N N N N -0.734 -3.477 -0.928 -1.480 -0.358 -1.618 H9 U8W 27 U8W H11 H11 H 0 1 N N N N N N -0.982 -1.178 -2.506 -2.564 0.202 1.178 H11 U8W 28 U8W H12 H12 H 0 1 N N N N N N -2.102 -2.447 -1.905 -2.595 1.365 -0.169 H12 U8W 29 U8W H13 H13 H 0 1 N N N N N N -3.047 -2.113 -5.613 -5.474 1.794 -1.422 H13 U8W 30 U8W H14 H14 H 0 1 N N N N N N -3.047 -5.245 -3.737 -7.290 -0.562 -0.365 H14 U8W 31 U8W O1 O11 O 0 1 N Y N N N N -0.137 -2.069 -0.104 -1.342 -1.745 -0.093 O1 U8W 32 U8W H15 H15 H 0 1 N N N N N N 2.619 -10.642 -1.548 7.113 -0.443 -0.150 H15 U8W 33 U8W H10 H10 H 0 1 N N N N N N 0.548 -2.405 0.461 -1.265 -1.845 0.866 H10 U8W 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U8W O5 P1 DOUB N N 1 U8W O3 P1 SING N N 2 U8W P1 O2 SING N N 3 U8W P1 O4 SING N N 4 U8W O2 C2 SING N N 5 U8W O10 S1 DOUB N N 6 U8W O8 C5 SING N N 7 U8W O11 S1 DOUB N N 8 U8W C2 C1 SING N N 9 U8W S1 O9 SING N N 10 U8W S1 C6 SING N N 11 U8W C5 C6 SING N N 12 U8W C5 C4 SING N N 13 U8W C3 C1 SING N N 14 U8W C3 C4 SING N N 15 U8W C3 O6 SING N N 16 U8W C4 O7 SING N N 17 U8W C4 H1 SING N N 18 U8W C5 H2 SING N N 19 U8W C6 H3 SING N N 20 U8W C6 H4 SING N N 21 U8W C3 H5 SING N N 22 U8W O8 H6 SING N N 23 U8W O7 H7 SING N N 24 U8W O6 H8 SING N N 25 U8W C1 H9 SING N N 26 U8W C2 H11 SING N N 27 U8W C2 H12 SING N N 28 U8W O3 H13 SING N N 29 U8W O4 H14 SING N N 30 U8W C1 O1 SING N N 31 U8W O9 H15 SING N N 32 U8W O1 H10 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U8W InChI InChI 1.03 "InChI=1S/C6H15O11PS/c7-3(1-17-18(11,12)13)5(9)6(10)4(8)2-19(14,15)16/h3-10H,1-2H2,(H2,11,12,13)(H,14,15,16)/t3-,4+,5+,6+/m0/s1" U8W InChIKey InChI 1.03 VHZSENSKSCIIQU-SLPGGIOYSA-N U8W SMILES_CANONICAL CACTVS 3.385 "O[C@@H](CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@H](O)C[S](O)(=O)=O" U8W SMILES CACTVS 3.385 "O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH](O)C[S](O)(=O)=O" U8W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H]([C@H]([C@@H](C(COP(=O)(O)O)O)O)O)O)S(=O)(=O)O" U8W SMILES "OpenEye OEToolkits" 2.0.7 "C(C(C(C(C(CS(=O)(=O)O)O)O)O)O)OP(=O)(O)O" # _pdbx_chem_comp_identifier.comp_id U8W _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S},4~{R})-2,3,4,5-tetrakis(oxidanyl)-6-phosphonooxy-hexane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U8W "Create component" 2021-02-03 PDBE U8W "Initial release" 2021-04-14 RCSB U8W "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id U8W _pdbx_chem_comp_pcm.modified_residue_id LYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C1 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NZ _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? _pdbx_chem_comp_pcm.first_instance_model_db_code 7NE2 #