data_UB1 # _chem_comp.id UB1 _chem_comp.name "3-({3-[(2S)-2-amino-2-carboxyethyl]-5-methyl-2,6-dioxo-3,6-dihydropyrimidin-1(2H)-yl}methyl)-4,5-dibromothiophene-2-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H13 Br2 N3 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-09-11 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 511.143 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UB1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2QS1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UB1 O23 O23 O 0 1 N N N -1.470 -6.482 14.292 -3.416 -2.971 1.668 O23 UB1 1 UB1 C22 C22 C 0 1 N N N -1.781 -7.066 15.357 -3.840 -1.831 1.653 C22 UB1 2 UB1 O24 O24 O 0 1 N N N -1.701 -8.299 15.501 -5.003 -1.536 2.270 O24 UB1 3 UB1 C21 C21 C 0 1 Y N N -2.282 -6.268 16.504 -3.087 -0.779 0.970 C21 UB1 4 UB1 S20 S20 S 0 1 Y N N -2.374 -6.975 18.091 -3.620 0.882 0.757 S20 UB1 5 UB1 C19 C19 C 0 1 Y N N -3.011 -5.579 18.863 -2.188 1.285 -0.079 C19 UB1 6 UB1 BR26 BR26 BR 0 0 N N N -3.470 -5.399 20.786 -1.798 3.000 -0.772 BR26 UB1 7 UB1 C18 C18 C 0 1 Y N N -3.162 -4.510 17.866 -1.377 0.222 -0.179 C18 UB1 8 UB1 BR25 BR25 BR 0 0 N N N -3.873 -2.738 18.369 0.302 0.305 -1.046 BR25 UB1 9 UB1 C17 C17 C 0 1 Y N N -2.756 -4.860 16.472 -1.852 -0.930 0.400 C17 UB1 10 UB1 C16 C16 C 0 1 N N N -2.802 -3.985 15.259 -1.091 -2.230 0.404 C16 UB1 11 UB1 N3 N3 N 0 1 N N N -4.042 -3.208 15.259 0.250 -2.013 -0.143 N3 UB1 12 UB1 C2 C2 C 0 1 N N N -3.926 -1.824 15.110 0.495 -2.272 -1.444 C2 UB1 13 UB1 O14 O14 O 0 1 N N N -2.807 -1.288 14.988 -0.393 -2.686 -2.166 O14 UB1 14 UB1 C1 C1 C 0 1 N N N -5.159 -1.006 15.105 1.795 -2.057 -1.962 C1 UB1 15 UB1 C13 C13 C 0 1 N N N -5.041 0.483 14.955 2.095 -2.339 -3.412 C13 UB1 16 UB1 C6 C6 C 0 1 N N N -6.392 -1.636 15.234 2.762 -1.597 -1.140 C6 UB1 17 UB1 C4 C4 C 0 1 N N N -5.329 -3.797 15.380 1.232 -1.549 0.653 C4 UB1 18 UB1 O15 O15 O 0 1 N N N -5.483 -5.035 15.511 0.995 -1.316 1.822 O15 UB1 19 UB1 N5 N5 N 0 1 N N N -6.488 -2.972 15.364 2.473 -1.346 0.174 N5 UB1 20 UB1 C7 C7 C 0 1 N N N -7.803 -3.612 15.491 3.522 -0.847 1.066 C7 UB1 21 UB1 C8 C8 C 0 1 N N S -8.237 -4.217 14.140 3.529 0.683 1.038 C8 UB1 22 UB1 N9 N9 N 0 1 N N N -7.997 -3.262 13.072 3.669 1.148 -0.348 N9 UB1 23 UB1 C10 C10 C 0 1 N N N -9.681 -4.659 14.195 4.685 1.195 1.859 C10 UB1 24 UB1 O11 O11 O 0 1 N N N -10.546 -4.082 13.485 5.701 1.554 1.312 O11 UB1 25 UB1 O12 O12 O 0 1 N N N -9.987 -5.604 14.957 4.585 1.253 3.196 O12 UB1 26 UB1 HO24 HO24 H 0 0 N N N -1.379 -8.692 14.698 -5.425 -2.294 2.696 HO24 UB1 27 UB1 H161 1H16 H 0 0 N N N -2.763 -4.611 14.355 -1.011 -2.602 1.426 H161 UB1 28 UB1 H162 2H16 H 0 0 N N N -1.942 -3.299 15.271 -1.619 -2.962 -0.208 H162 UB1 29 UB1 H131 1H13 H 0 0 N N N -5.012 0.951 15.950 1.194 -2.700 -3.906 H131 UB1 30 UB1 H132 2H13 H 0 0 N N N -4.117 0.724 14.409 2.434 -1.423 -3.897 H132 UB1 31 UB1 H133 3H13 H 0 0 N N N -5.908 0.865 14.396 2.876 -3.096 -3.481 H133 UB1 32 UB1 H6 H6 H 0 1 N N N -7.293 -1.040 15.230 3.760 -1.428 -1.517 H6 UB1 33 UB1 H71 1H7 H 0 1 N N N -8.542 -2.860 15.805 3.329 -1.191 2.082 H71 UB1 34 UB1 H72 2H7 H 0 1 N N N -7.739 -4.416 16.239 4.490 -1.220 0.733 H72 UB1 35 UB1 H8 H8 H 0 1 N N N -7.635 -5.113 13.930 2.594 1.058 1.455 H8 UB1 36 UB1 HN91 1HN9 H 0 0 N N N -7.942 -2.340 13.455 3.611 2.154 -0.400 HN91 UB1 37 UB1 HN92 2HN9 H 0 0 N N N -7.137 -3.484 12.613 4.528 0.813 -0.757 HN92 UB1 38 UB1 HO12 HO12 H 0 0 N N N -10.919 -5.775 14.891 5.353 1.588 3.679 HO12 UB1 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UB1 N9 C8 SING N N 1 UB1 O11 C10 DOUB N N 2 UB1 C8 C10 SING N N 3 UB1 C8 C7 SING N N 4 UB1 C10 O12 SING N N 5 UB1 O23 C22 DOUB N N 6 UB1 C13 C1 SING N N 7 UB1 O14 C2 DOUB N N 8 UB1 C1 C2 SING N N 9 UB1 C1 C6 DOUB N N 10 UB1 C2 N3 SING N N 11 UB1 C6 N5 SING N N 12 UB1 C16 N3 SING N N 13 UB1 C16 C17 SING N N 14 UB1 N3 C4 SING N N 15 UB1 C22 O24 SING N N 16 UB1 C22 C21 SING N N 17 UB1 N5 C4 SING N N 18 UB1 N5 C7 SING N N 19 UB1 C4 O15 DOUB N N 20 UB1 C17 C21 DOUB Y N 21 UB1 C17 C18 SING Y N 22 UB1 C21 S20 SING Y N 23 UB1 C18 BR25 SING N N 24 UB1 C18 C19 DOUB Y N 25 UB1 S20 C19 SING Y N 26 UB1 C19 BR26 SING N N 27 UB1 O24 HO24 SING N N 28 UB1 C16 H161 SING N N 29 UB1 C16 H162 SING N N 30 UB1 C13 H131 SING N N 31 UB1 C13 H132 SING N N 32 UB1 C13 H133 SING N N 33 UB1 C6 H6 SING N N 34 UB1 C7 H71 SING N N 35 UB1 C7 H72 SING N N 36 UB1 C8 H8 SING N N 37 UB1 N9 HN91 SING N N 38 UB1 N9 HN92 SING N N 39 UB1 O12 HO12 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UB1 SMILES ACDLabs 10.04 "Brc1c(c(sc1Br)C(=O)O)CN2C(=O)C(=CN(C2=O)CC(C(=O)O)N)C" UB1 SMILES_CANONICAL CACTVS 3.341 "CC1=CN(C[C@H](N)C(O)=O)C(=O)N(Cc2c(Br)c(Br)sc2C(O)=O)C1=O" UB1 SMILES CACTVS 3.341 "CC1=CN(C[CH](N)C(O)=O)C(=O)N(Cc2c(Br)c(Br)sc2C(O)=O)C1=O" UB1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC1=CN(C(=O)N(C1=O)Cc2c(c(sc2C(=O)O)Br)Br)C[C@@H](C(=O)O)N" UB1 SMILES "OpenEye OEToolkits" 1.5.0 "CC1=CN(C(=O)N(C1=O)Cc2c(c(sc2C(=O)O)Br)Br)CC(C(=O)O)N" UB1 InChI InChI 1.03 "InChI=1S/C14H13Br2N3O6S/c1-5-2-18(4-7(17)12(21)22)14(25)19(11(5)20)3-6-8(15)10(16)26-9(6)13(23)24/h2,7H,3-4,17H2,1H3,(H,21,22)(H,23,24)/t7-/m0/s1" UB1 InChIKey InChI 1.03 VDFYFXPYXBDMBE-ZETCQYMHSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UB1 "SYSTEMATIC NAME" ACDLabs 10.04 "3-({3-[(2S)-2-amino-2-carboxyethyl]-5-methyl-2,6-dioxo-3,6-dihydropyrimidin-1(2H)-yl}methyl)-4,5-dibromothiophene-2-carboxylic acid" UB1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-[[3-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-5-methyl-2,6-dioxo-pyrimidin-1-yl]methyl]-4,5-dibromo-thiophene-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UB1 "Create component" 2007-09-11 RCSB UB1 "Modify aromatic_flag" 2011-06-04 RCSB UB1 "Modify descriptor" 2011-06-04 RCSB #