data_UB5 # _chem_comp.id UB5 _chem_comp.name "4-methyl-~{N}-pentyl-piperidine-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H24 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-09 _chem_comp.pdbx_modified_date 2022-02-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 212.332 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UB5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7NGS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UB5 C4 C1 C 0 1 N N N -15.698 -28.960 2.826 3.021 0.421 -0.183 C4 UB5 1 UB5 C5 C2 C 0 1 N N N -14.651 -28.374 1.907 1.990 -0.675 0.095 C5 UB5 2 UB5 C6 C3 C 0 1 N N N -12.508 -27.322 1.998 -0.408 -1.017 -0.168 C6 UB5 3 UB5 C11 C4 C 0 1 N N N -8.844 -27.050 2.462 -3.809 -0.578 0.669 C11 UB5 4 UB5 C7 C5 C 0 1 N N N -11.090 -27.612 4.036 -1.827 0.780 -1.032 C7 UB5 5 UB5 C8 C6 C 0 1 N N N -9.890 -26.948 4.678 -2.819 1.561 -0.165 C8 UB5 6 UB5 C9 C7 C 0 1 N N N -8.620 -27.313 3.943 -4.111 0.754 -0.022 C9 UB5 7 UB5 C10 C8 C 0 1 N N N -7.383 -26.625 4.512 -5.117 1.546 0.815 C10 UB5 8 UB5 C12 C9 C 0 1 N N N -10.171 -26.380 2.141 -2.828 -1.383 -0.189 C12 UB5 9 UB5 N1 N1 N 0 1 N N N -13.512 -27.826 2.631 0.663 -0.213 -0.319 N1 UB5 10 UB5 N2 N2 N 0 1 N N N -11.312 -27.134 2.665 -1.642 -0.557 -0.452 N2 UB5 11 UB5 C3 C10 C 0 1 N N N -16.503 -30.023 2.138 4.407 -0.061 0.249 C3 UB5 12 UB5 C1 C11 C 0 1 N N N -16.898 -31.212 -0.005 6.824 0.552 0.404 C1 UB5 13 UB5 C2 C12 C 0 1 N N N -16.608 -29.887 0.646 5.438 1.035 -0.028 C2 UB5 14 UB5 O1 O1 O 0 1 N N N -12.669 -27.051 0.810 -0.260 -2.158 0.225 O1 UB5 15 UB5 H1 H1 H 0 1 N N N -15.199 -29.401 3.701 3.032 0.649 -1.249 H1 UB5 16 UB5 H2 H2 H 0 1 N N N -16.374 -28.157 3.155 2.758 1.318 0.377 H2 UB5 17 UB5 H3 H3 H 0 1 N N N -15.112 -27.569 1.315 2.254 -1.572 -0.465 H3 UB5 18 UB5 H4 H4 H 0 1 N N N -14.292 -29.165 1.233 1.980 -0.902 1.161 H4 UB5 19 UB5 H5 H5 H 0 1 N N N -8.806 -28.013 1.931 -3.366 -0.388 1.647 H5 UB5 20 UB5 H6 H6 H 0 1 N N N -8.033 -26.400 2.101 -4.734 -1.142 0.792 H6 UB5 21 UB5 H7 H7 H 0 1 N N N -11.983 -27.391 4.639 -2.220 0.689 -2.045 H7 UB5 22 UB5 H8 H8 H 0 1 N N N -10.924 -28.699 4.011 -0.872 1.305 -1.058 H8 UB5 23 UB5 H9 H9 H 0 1 N N N -9.810 -27.280 5.724 -2.385 1.731 0.821 H9 UB5 24 UB5 H10 H10 H 0 1 N N N -10.023 -25.856 4.649 -3.038 2.520 -0.635 H10 UB5 25 UB5 H11 H11 H 0 1 N N N -8.472 -28.396 4.062 -4.531 0.564 -1.010 H11 UB5 26 UB5 H12 H12 H 0 1 N N N -7.290 -26.862 5.582 -4.698 1.736 1.803 H12 UB5 27 UB5 H13 H13 H 0 1 N N N -6.489 -26.980 3.979 -5.332 2.495 0.323 H13 UB5 28 UB5 H14 H14 H 0 1 N N N -7.478 -25.536 4.385 -6.038 0.972 0.916 H14 UB5 29 UB5 H15 H15 H 0 1 N N N -10.177 -25.374 2.586 -2.533 -2.287 0.343 H15 UB5 30 UB5 H16 H16 H 0 1 N N N -10.272 -26.299 1.049 -3.304 -1.651 -1.133 H16 UB5 31 UB5 H17 H17 H 0 1 N N N -13.509 -27.841 3.631 0.555 0.672 -0.701 H17 UB5 32 UB5 H18 H18 H 0 1 N N N -17.521 -30.000 2.553 4.397 -0.289 1.315 H18 UB5 33 UB5 H19 H19 H 0 1 N N N -16.039 -30.996 2.358 4.671 -0.958 -0.311 H19 UB5 34 UB5 H20 H20 H 0 1 N N N -16.969 -31.078 -1.095 6.814 0.325 1.470 H20 UB5 35 UB5 H21 H21 H 0 1 N N N -16.087 -31.919 0.226 7.088 -0.345 -0.156 H21 UB5 36 UB5 H22 H22 H 0 1 N N N -17.850 -31.608 0.378 7.559 1.333 0.206 H22 UB5 37 UB5 H23 H23 H 0 1 N N N -15.658 -29.496 0.254 5.449 1.262 -1.094 H23 UB5 38 UB5 H24 H24 H 0 1 N N N -17.420 -29.185 0.407 5.175 1.932 0.532 H24 UB5 39 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UB5 C1 C2 SING N N 1 UB5 C2 C3 SING N N 2 UB5 O1 C6 DOUB N N 3 UB5 C5 N1 SING N N 4 UB5 C5 C4 SING N N 5 UB5 C6 N1 SING N N 6 UB5 C6 N2 SING N N 7 UB5 C3 C4 SING N N 8 UB5 C12 C11 SING N N 9 UB5 C12 N2 SING N N 10 UB5 C11 C9 SING N N 11 UB5 N2 C7 SING N N 12 UB5 C9 C10 SING N N 13 UB5 C9 C8 SING N N 14 UB5 C7 C8 SING N N 15 UB5 C4 H1 SING N N 16 UB5 C4 H2 SING N N 17 UB5 C5 H3 SING N N 18 UB5 C5 H4 SING N N 19 UB5 C11 H5 SING N N 20 UB5 C11 H6 SING N N 21 UB5 C7 H7 SING N N 22 UB5 C7 H8 SING N N 23 UB5 C8 H9 SING N N 24 UB5 C8 H10 SING N N 25 UB5 C9 H11 SING N N 26 UB5 C10 H12 SING N N 27 UB5 C10 H13 SING N N 28 UB5 C10 H14 SING N N 29 UB5 C12 H15 SING N N 30 UB5 C12 H16 SING N N 31 UB5 N1 H17 SING N N 32 UB5 C3 H18 SING N N 33 UB5 C3 H19 SING N N 34 UB5 C1 H20 SING N N 35 UB5 C1 H21 SING N N 36 UB5 C1 H22 SING N N 37 UB5 C2 H23 SING N N 38 UB5 C2 H24 SING N N 39 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UB5 InChI InChI 1.03 "InChI=1S/C12H24N2O/c1-3-4-5-8-13-12(15)14-9-6-11(2)7-10-14/h11H,3-10H2,1-2H3,(H,13,15)" UB5 InChIKey InChI 1.03 ZVWQTTCMILVTNG-UHFFFAOYSA-N UB5 SMILES_CANONICAL CACTVS 3.385 "CCCCCNC(=O)N1CCC(C)CC1" UB5 SMILES CACTVS 3.385 "CCCCCNC(=O)N1CCC(C)CC1" UB5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCNC(=O)N1CCC(CC1)C" UB5 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCNC(=O)N1CCC(CC1)C" # _pdbx_chem_comp_identifier.comp_id UB5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-methyl-~{N}-pentyl-piperidine-1-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UB5 "Create component" 2021-02-09 PDBE UB5 "Initial release" 2022-02-23 RCSB ##