data_UBU # _chem_comp.id UBU _chem_comp.name "N-[(R)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-ethyl-L-leucinamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H28 N3 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-08-03 _chem_comp.pdbx_modified_date 2012-07-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 385.395 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UBU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3T8F _chem_comp.pdbx_subcomponent_list "PHQ PGL LNE" _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UBU C23 C23 C 0 1 Y N N 15.083 40.626 -12.690 -5.944 -0.996 -1.288 C1 PHQ 1 UBU C22 C22 C 0 1 Y N N 16.325 40.205 -13.161 -7.161 -0.829 -1.921 C2 PHQ 2 UBU C21 C21 C 0 1 Y N N 17.457 40.335 -12.368 -8.202 -0.201 -1.264 C3 PHQ 3 UBU C20 C20 C 0 1 Y N N 17.354 40.891 -11.096 -8.026 0.261 0.027 C4 PHQ 4 UBU C19 C19 C 0 1 Y N N 16.113 41.305 -10.620 -6.809 0.094 0.661 C5 PHQ 5 UBU C1 C1 C 0 1 Y N N 14.979 41.170 -11.415 -5.768 -0.534 0.003 C6 PHQ 6 UBU C2 C2 C 0 1 N N N 13.639 41.629 -10.887 -4.443 -0.721 0.696 C7 PHQ 7 UBU O3 O3 O 0 1 N N N 13.098 40.586 -10.083 -3.591 0.424 0.429 O12 PHQ 8 UBU C4 C4 C 0 1 N N N 12.965 40.776 -8.662 -2.362 0.414 0.980 C14 PHQ 9 UBU O26 O26 O 0 1 N N N 13.653 41.621 -8.108 -2.011 -0.527 1.665 O15 PHQ 10 UBU N5 N5 N 0 1 N N N 12.110 39.982 -8.036 -1.521 1.446 0.772 N PGL 11 UBU C6 C6 C 0 1 N N N 11.992 40.039 -6.595 -0.185 1.435 1.371 C PGL 12 UBU P7 P7 P 0 1 N N N 11.477 38.446 -5.917 1.016 0.780 0.166 P PGL 13 UBU O24 O24 O 0 1 N N N 10.145 38.031 -6.510 0.633 -0.599 -0.213 O1 PGL 14 UBU O8 O8 O 0 1 N N N 12.657 37.416 -6.155 1.024 1.713 -1.146 O2 PGL 15 UBU N9 N9 N 0 1 N N N 11.257 38.738 -4.283 2.552 0.766 0.854 N9 LNE 16 UBU C10 C10 C 0 1 N N S 10.060 38.296 -3.573 3.526 0.133 -0.044 C10 LNE 17 UBU C11 C11 C 0 1 N N N 8.889 39.219 -3.807 3.695 -1.315 0.339 C11 LNE 18 UBU N12 N12 N 0 1 N N N 9.161 40.519 -3.939 4.546 -2.100 -0.352 N12 LNE 19 UBU C13 C13 C 0 1 N N N 8.119 41.531 -4.027 4.710 -3.507 0.021 C13 LNE 20 UBU C14 C14 C 0 1 N N N 8.193 42.500 -2.866 5.725 -4.167 -0.915 C14 LNE 21 UBU C15 C15 C 0 1 N N N 10.445 38.340 -2.099 4.871 0.852 0.073 C15 LNE 22 UBU C16 C16 C 0 1 N N N 9.317 37.862 -1.184 4.728 2.287 -0.438 C16 LNE 23 UBU C17 C17 C 0 1 N N N 9.139 36.354 -1.258 6.029 3.052 -0.182 C17 LNE 24 UBU C18 C18 C 0 1 N N N 9.589 38.280 0.259 4.436 2.268 -1.939 C18 LNE 25 UBU O25 O25 O 0 1 N N N 7.752 38.763 -3.857 3.066 -1.773 1.269 O25 LNE 26 UBU H23 H23 H 0 1 N N N 14.206 40.530 -13.312 -5.132 -1.491 -1.800 H1 PHQ 27 UBU H22 H22 H 0 1 N N N 16.407 39.775 -14.148 -7.299 -1.190 -2.930 H2 PHQ 28 UBU H21 H21 H 0 1 N N N 18.417 40.005 -12.738 -9.153 -0.070 -1.759 H3 PHQ 29 UBU H20 H20 H 0 1 N N N 18.234 41.001 -10.480 -8.839 0.753 0.540 H4 PHQ 30 UBU H19 H19 H 0 1 N N N 16.030 41.732 -9.631 -6.671 0.454 1.669 H5 PHQ 31 UBU H2 H2 H 0 1 N N N 13.766 42.540 -10.283 -4.604 -0.811 1.770 H71 PHQ 32 UBU H2A H2A H 0 1 N N N 12.961 41.846 -11.725 -3.962 -1.626 0.324 H72 PHQ 33 UBU HN5 HN5 H 0 1 N N N 11.546 39.343 -8.559 -1.801 2.197 0.225 HN1 PGL 34 UBU H6 H6 H 0 1 N N N 12.969 40.308 -6.168 0.097 2.450 1.649 H1 PGL 35 UBU H6A H6A H 0 1 N N N 11.242 40.798 -6.329 -0.190 0.803 2.259 H2 PGL 36 UBU HO8 HO8 H 0 1 N N N 12.334 36.672 -6.650 1.339 2.613 -0.986 HO2 PGL 37 UBU HN9 HN9 H 0 1 N N N 12.022 38.285 -3.825 2.844 1.699 1.104 HN9 LNE 38 UBU H10 H10 H 0 1 N N N 9.747 37.299 -3.917 3.168 0.197 -1.072 H10 LNE 39 UBU HN12 HN12 H 0 0 N N N 10.117 40.809 -3.979 5.049 -1.733 -1.096 HN12 LNE 40 UBU H13 H13 H 0 1 N N N 8.245 42.090 -4.966 5.068 -3.571 1.048 H13 LNE 41 UBU H13A H13A H 0 0 N N N 7.138 41.033 -4.013 3.752 -4.019 -0.063 H13A LNE 42 UBU H14 H14 H 0 1 N N N 7.394 43.250 -2.962 5.367 -4.103 -1.943 H14 LNE 43 UBU H14A H14A H 0 0 N N N 8.068 41.950 -1.921 6.684 -3.654 -0.831 H14A LNE 44 UBU H14B H14B H 0 0 N N N 9.171 43.004 -2.871 5.848 -5.214 -0.638 H14B LNE 45 UBU H15 H15 H 0 1 N N N 11.317 37.687 -1.947 5.185 0.868 1.117 H15 LNE 46 UBU H15A H15A H 0 0 N N N 10.692 39.379 -1.834 5.617 0.327 -0.523 H15A LNE 47 UBU H16 H16 H 0 1 N N N 8.386 38.334 -1.531 3.909 2.779 0.086 H16 LNE 48 UBU H17 H17 H 0 1 N N N 8.322 36.047 -0.589 6.849 2.560 -0.705 H17 LNE 49 UBU H17A H17A H 0 0 N N N 8.896 36.064 -2.291 5.927 4.074 -0.545 H17A LNE 50 UBU H17B H17B H 0 0 N N N 10.071 35.859 -0.948 6.238 3.066 0.888 H17B LNE 51 UBU H18 H18 H 0 1 N N N 8.770 37.929 0.904 5.255 1.776 -2.463 H18 LNE 52 UBU H18A H18A H 0 0 N N N 10.537 37.836 0.597 3.509 1.723 -2.122 H18A LNE 53 UBU H18B H18B H 0 0 N N N 9.657 39.376 0.316 4.334 3.290 -2.303 H18B LNE 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UBU C23 C1 DOUB Y N 1 UBU C1 C2 SING N N 2 UBU C1 C19 SING Y N 3 UBU C2 O3 SING N N 4 UBU C2 H2 SING N N 5 UBU C2 H2A SING N N 6 UBU O3 C4 SING N N 7 UBU C4 O26 DOUB N N 8 UBU C4 N5 SING N N 9 UBU N5 C6 SING N N 10 UBU N5 HN5 SING N N 11 UBU C6 P7 SING N N 12 UBU C6 H6 SING N N 13 UBU C6 H6A SING N N 14 UBU O24 P7 DOUB N N 15 UBU O8 P7 SING N N 16 UBU P7 N9 SING N N 17 UBU O8 HO8 SING N N 18 UBU N9 C10 SING N N 19 UBU N9 HN9 SING N N 20 UBU C11 C10 SING N N 21 UBU C10 C15 SING N N 22 UBU C10 H10 SING N N 23 UBU N12 C11 SING N N 24 UBU O25 C11 DOUB N N 25 UBU C13 N12 SING N N 26 UBU N12 HN12 SING N N 27 UBU C13 C14 SING N N 28 UBU C13 H13 SING N N 29 UBU C13 H13A SING N N 30 UBU C14 H14 SING N N 31 UBU C14 H14A SING N N 32 UBU C14 H14B SING N N 33 UBU C15 C16 SING N N 34 UBU C15 H15 SING N N 35 UBU C15 H15A SING N N 36 UBU C17 C16 SING N N 37 UBU C16 C18 SING N N 38 UBU C16 H16 SING N N 39 UBU C17 H17 SING N N 40 UBU C17 H17A SING N N 41 UBU C17 H17B SING N N 42 UBU C18 H18 SING N N 43 UBU C18 H18A SING N N 44 UBU C18 H18B SING N N 45 UBU C20 C19 DOUB Y N 46 UBU C19 H19 SING N N 47 UBU C21 C20 SING Y N 48 UBU C20 H20 SING N N 49 UBU C22 C21 DOUB Y N 50 UBU C21 H21 SING N N 51 UBU C22 C23 SING Y N 52 UBU C22 H22 SING N N 53 UBU C23 H23 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UBU SMILES ACDLabs 12.01 "O=C(NCC)C(NP(=O)(O)CNC(=O)OCc1ccccc1)CC(C)C" UBU InChI InChI 1.03 "InChI=1S/C17H28N3O5P/c1-4-18-16(21)15(10-13(2)3)20-26(23,24)12-19-17(22)25-11-14-8-6-5-7-9-14/h5-9,13,15H,4,10-12H2,1-3H3,(H,18,21)(H,19,22)(H2,20,23,24)/t15-/m0/s1" UBU InChIKey InChI 1.03 AYDYEZVQGYFZKJ-HNNXBMFYSA-N UBU SMILES_CANONICAL CACTVS 3.370 "CCNC(=O)[C@H](CC(C)C)N[P](O)(=O)CNC(=O)OCc1ccccc1" UBU SMILES CACTVS 3.370 "CCNC(=O)[CH](CC(C)C)N[P](O)(=O)CNC(=O)OCc1ccccc1" UBU SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CCNC(=O)[C@H](CC(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O" UBU SMILES "OpenEye OEToolkits" 1.7.2 "CCNC(=O)C(CC(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UBU "SYSTEMATIC NAME" ACDLabs 12.01 "N~2~-[(R)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-ethyl-L-leucinamide" UBU "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "N-[(2S)-1-(ethylamino)-4-methyl-1-oxidanylidene-pentan-2-yl]-(phenylmethoxycarbonylaminomethyl)phosphonamidic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UBU "Create component" 2011-08-03 RCSB #