data_UFY # _chem_comp.id UFY _chem_comp.name "N-[(1R)-1-borono-3-methylbutyl]-Nalpha-(pyrazine-2-carbonyl)-D-phenylalaninamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H25 B N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-15 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 384.237 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UFY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6WZV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UFY C1 C1 C 0 1 Y N N N N N 23.649 334.789 77.495 -4.194 3.012 1.330 C1 UFY 1 UFY C2 C2 C 0 1 Y N N N N N 22.823 335.595 78.246 -5.455 2.820 0.785 C2 UFY 2 UFY C11 C3 C 0 1 N N N N N N 23.025 334.386 67.864 4.863 -0.206 0.377 C11 UFY 3 UFY C12 C4 C 0 1 N N R N N N 23.494 334.995 69.191 3.836 0.739 -0.250 C12 UFY 4 UFY C17 C5 C 0 1 N N N N N N 25.180 333.063 67.529 5.310 -1.734 2.303 C17 UFY 5 UFY C19 C6 C 0 1 N N R N N N 22.415 333.200 72.374 0.115 -0.151 -0.359 C19 UFY 6 UFY C20 C7 C 0 1 N N N N N N 23.290 333.908 71.358 1.407 0.591 -0.133 C20 UFY 7 UFY C22 C8 C 0 1 N N N N N N 22.779 331.719 72.400 0.130 -1.457 0.437 C22 UFY 8 UFY C23 C9 C 0 1 Y N N N N N 21.625 330.894 72.901 -1.107 -2.256 0.116 C23 UFY 9 UFY C24 C10 C 0 1 Y N N N N N 20.331 331.394 72.860 -2.257 -2.079 0.862 C24 UFY 10 UFY C25 C11 C 0 1 Y N N N N N 19.285 330.612 73.321 -3.391 -2.811 0.567 C25 UFY 11 UFY C26 C12 C 0 1 Y N N N N N 19.534 329.340 73.819 -3.376 -3.721 -0.474 C26 UFY 12 UFY C27 C13 C 0 1 Y N N N N N 20.825 328.845 73.868 -2.227 -3.897 -1.220 C27 UFY 13 UFY C28 C14 C 0 1 Y N N N N N 21.872 329.625 73.406 -1.093 -3.162 -0.929 C28 UFY 14 UFY B14 B1 B 0 1 N N N N N N 23.223 336.580 69.246 4.383 1.269 -1.623 B14 UFY 15 UFY C10 C15 C 0 1 N N N N N N 23.647 333.035 67.445 4.357 -0.677 1.742 C10 UFY 16 UFY C4 C16 C 0 1 Y N N N N N 21.341 335.773 76.493 -4.641 1.133 -0.530 C4 UFY 17 UFY C5 C17 C 0 1 Y N N N N N 22.176 334.971 75.732 -3.370 1.331 0.007 C5 UFY 18 UFY C7 C18 C 0 1 N N N N N N 21.821 334.605 74.343 -2.234 0.493 -0.442 C7 UFY 19 UFY C9 C19 C 0 1 N N N N N N 23.144 331.855 68.273 4.292 0.513 2.701 C9 UFY 20 UFY N13 N1 N 0 1 N N N N N N 22.713 334.298 70.210 2.580 0.018 -0.469 N13 UFY 21 UFY N18 N2 N 0 1 N N N N N N 22.613 333.699 73.731 -1.008 0.678 0.086 N18 UFY 22 UFY N3 N3 N 0 1 Y N N N N N 21.701 336.054 77.730 -5.649 1.888 -0.130 N3 UFY 23 UFY N6 N4 N 0 1 Y N N N N N 23.299 334.494 76.265 -3.181 2.268 0.933 N6 UFY 24 UFY O15 O1 O 0 1 N N N N N N 23.549 337.267 70.497 3.478 1.618 -2.660 O15 UFY 25 UFY O16 O2 O 0 1 N N N N N N 21.830 336.800 69.014 5.782 1.400 -1.827 O16 UFY 26 UFY O21 O3 O 0 1 N N N N N N 24.478 334.139 71.532 1.392 1.702 0.352 O21 UFY 27 UFY O8 O4 O 0 1 N N N N N N 20.863 335.103 73.794 -2.408 -0.363 -1.288 O8 UFY 28 UFY H1 H1 H 0 1 N N N N N N 24.569 334.406 77.911 -4.041 3.776 2.078 H1 UFY 29 UFY H2 H2 H 0 1 N N N N N N 23.095 335.851 79.259 -6.281 3.435 1.110 H2 UFY 30 UFY H3 H3 H 0 1 N N N N N N 23.248 335.113 67.069 5.009 -1.068 -0.274 H3 UFY 31 UFY H4 H4 H 0 1 N N N N N N 21.937 334.241 67.933 5.811 0.319 0.503 H4 UFY 32 UFY H5 H5 H 0 1 N N N N N N 24.570 334.812 69.327 3.660 1.581 0.421 H5 UFY 33 UFY H6 H6 H 0 1 N N N N N N 25.582 332.086 67.224 6.305 -1.303 2.414 H6 UFY 34 UFY H7 H7 H 0 1 N N N N N N 25.570 333.845 66.860 4.949 -2.069 3.275 H7 UFY 35 UFY H8 H8 H 0 1 N N N N N N 25.487 333.279 68.563 5.356 -2.582 1.620 H8 UFY 36 UFY H9 H9 H 0 1 N N N N N N 21.360 333.308 72.082 0.004 -0.373 -1.420 H9 UFY 37 UFY H10 H10 H 0 1 N N N N N N 23.040 331.394 71.382 1.015 -2.035 0.170 H10 UFY 38 UFY H11 H11 H 0 1 N N N N N N 23.643 331.572 73.065 0.151 -1.233 1.503 H11 UFY 39 UFY H12 H12 H 0 1 N N N N N N 20.141 332.384 72.472 -2.269 -1.368 1.675 H12 UFY 40 UFY H13 H13 H 0 1 N N N N N N 18.274 330.992 73.293 -4.290 -2.674 1.151 H13 UFY 41 UFY H14 H14 H 0 1 N N N N N N 18.713 328.732 74.171 -4.263 -4.293 -0.703 H14 UFY 42 UFY H15 H15 H 0 1 N N N N N N 21.015 327.858 74.263 -2.215 -4.608 -2.033 H15 UFY 43 UFY H16 H16 H 0 1 N N N N N N 22.882 329.245 73.439 -0.196 -3.297 -1.514 H16 UFY 44 UFY H17 H17 H 0 1 N N N N N N 23.372 332.853 66.396 3.362 -1.108 1.631 H17 UFY 45 UFY H18 H18 H 0 1 N N N N N N 20.419 336.158 76.084 -4.799 0.371 -1.279 H18 UFY 46 UFY H19 H19 H 0 1 N N N N N N 22.046 331.816 68.227 5.258 1.019 2.717 H19 UFY 47 UFY H20 H20 H 0 1 N N N N N N 23.561 330.920 67.870 3.523 1.208 2.366 H20 UFY 48 UFY H21 H21 H 0 1 N N N N N N 23.463 331.979 69.319 4.051 0.159 3.704 H21 UFY 49 UFY H22 H22 H 0 1 N N N N N N 21.744 334.110 70.052 2.592 -0.871 -0.857 H22 UFY 50 UFY H23 H23 H 0 1 N N N N N N 23.393 333.343 74.246 -0.869 1.361 0.761 H23 UFY 51 UFY H24 H24 H 0 1 N N N N N N 24.471 337.148 70.693 2.547 1.495 -2.428 H24 UFY 52 UFY H25 H25 H 0 1 N N N N N N 21.647 337.732 69.042 6.314 1.189 -1.048 H25 UFY 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UFY C10 C17 SING N N 1 UFY C10 C11 SING N N 2 UFY C10 C9 SING N N 3 UFY C11 C12 SING N N 4 UFY O16 B14 SING N N 5 UFY C12 B14 SING N N 6 UFY C12 N13 SING N N 7 UFY B14 O15 SING N N 8 UFY N13 C20 SING N N 9 UFY C20 O21 DOUB N N 10 UFY C20 C19 SING N N 11 UFY C19 C22 SING N N 12 UFY C19 N18 SING N N 13 UFY C22 C23 SING N N 14 UFY C24 C23 DOUB Y N 15 UFY C24 C25 SING Y N 16 UFY C23 C28 SING Y N 17 UFY C25 C26 DOUB Y N 18 UFY C28 C27 DOUB Y N 19 UFY N18 C7 SING N N 20 UFY O8 C7 DOUB N N 21 UFY C26 C27 SING Y N 22 UFY C7 C5 SING N N 23 UFY C5 N6 DOUB Y N 24 UFY C5 C4 SING Y N 25 UFY N6 C1 SING Y N 26 UFY C4 N3 DOUB Y N 27 UFY C1 C2 DOUB Y N 28 UFY N3 C2 SING Y N 29 UFY C1 H1 SING N N 30 UFY C2 H2 SING N N 31 UFY C11 H3 SING N N 32 UFY C11 H4 SING N N 33 UFY C12 H5 SING N N 34 UFY C17 H6 SING N N 35 UFY C17 H7 SING N N 36 UFY C17 H8 SING N N 37 UFY C19 H9 SING N N 38 UFY C22 H10 SING N N 39 UFY C22 H11 SING N N 40 UFY C24 H12 SING N N 41 UFY C25 H13 SING N N 42 UFY C26 H14 SING N N 43 UFY C27 H15 SING N N 44 UFY C28 H16 SING N N 45 UFY C10 H17 SING N N 46 UFY C4 H18 SING N N 47 UFY C9 H19 SING N N 48 UFY C9 H20 SING N N 49 UFY C9 H21 SING N N 50 UFY N13 H22 SING N N 51 UFY N18 H23 SING N N 52 UFY O15 H24 SING N N 53 UFY O16 H25 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UFY SMILES ACDLabs 12.01 "c1cncc(n1)C(NC(Cc2ccccc2)C(=O)NC(CC(C)C)B(O)O)=O" UFY InChI InChI 1.03 "InChI=1S/C19H25BN4O4/c1-13(2)10-17(20(27)28)24-18(25)15(11-14-6-4-3-5-7-14)23-19(26)16-12-21-8-9-22-16/h3-9,12-13,15,17,27-28H,10-11H2,1-2H3,(H,23,26)(H,24,25)/t15-,17+/m1/s1" UFY InChIKey InChI 1.03 GXJABQQUPOEUTA-WBVHZDCISA-N UFY SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)[C@@H](Cc1ccccc1)NC(=O)c2cnccn2)B(O)O" UFY SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)[CH](Cc1ccccc1)NC(=O)c2cnccn2)B(O)O" UFY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B([C@H](CC(C)C)NC(=O)[C@@H](Cc1ccccc1)NC(=O)c2cnccn2)(O)O" UFY SMILES "OpenEye OEToolkits" 2.0.7 "B(C(CC(C)C)NC(=O)C(Cc1ccccc1)NC(=O)c2cnccn2)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UFY "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(1R)-1-borono-3-methylbutyl]-Nalpha-(pyrazine-2-carbonyl)-D-phenylalaninamide" UFY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(1~{R})-3-methyl-1-[[(2~{R})-3-phenyl-2-(pyrazin-2-ylcarbonylamino)propanoyl]amino]butyl]boronic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UFY "Create component" 2020-05-15 RCSB UFY "Initial release" 2021-04-14 RCSB UFY "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id UFY _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom B14 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #