data_UH2 # _chem_comp.id UH2 _chem_comp.name "(2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[4-azanyl-5-[2-(1~{H}-benzimidazol-2-yl)ethynyl]pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H25 N7 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-03 _chem_comp.pdbx_modified_date 2023-03-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 523.564 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UH2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8CES _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UH2 N N1 N 0 1 N N N 18.479 13.581 41.541 7.892 -2.857 0.872 N UH2 1 UH2 CA C1 C 0 1 N N S 19.873 13.309 41.032 6.768 -3.365 0.074 CA UH2 2 UH2 C C2 C 0 1 N N N 19.856 12.233 39.932 7.287 -4.299 -0.988 C UH2 3 UH2 O O1 O 0 1 N N N 18.816 12.105 39.261 8.449 -4.253 -1.318 O UH2 4 UH2 CB C3 C 0 1 N N N 20.874 12.854 42.114 6.042 -2.192 -0.589 CB UH2 5 UH2 OXT O2 O 0 1 N N N 20.912 11.567 39.775 6.460 -5.182 -1.568 OXT UH2 6 UH2 C10 C4 C 0 1 Y N N 21.398 22.399 43.831 -2.488 5.221 -1.549 C10 UH2 7 UH2 C12 C5 C 0 1 Y N N 22.502 20.931 45.072 -1.343 3.408 -0.714 C12 UH2 8 UH2 C13 C6 C 0 1 Y N N 22.638 21.844 46.129 -2.536 2.668 -0.748 C13 UH2 9 UH2 C14 C7 C 0 1 Y N N 23.397 21.176 47.150 -2.200 1.326 -0.246 C14 UH2 10 UH2 C15 C8 C 0 1 N N N 23.850 21.804 48.355 -3.093 0.217 -0.095 C15 UH2 11 UH2 C16 C9 C 0 1 N N N 24.257 22.428 49.293 -3.825 -0.692 0.028 C16 UH2 12 UH2 C17 C10 C 0 1 Y N N 24.779 23.284 50.282 -4.718 -1.801 0.179 C17 UH2 13 UH2 C19 C11 C 0 1 Y N N 25.101 25.129 51.451 -5.510 -3.820 0.641 C19 UH2 14 UH2 C20 C12 C 0 1 Y N N 25.914 24.101 51.920 -6.542 -3.000 0.151 C20 UH2 15 UH2 C22 C13 C 0 1 Y N N 26.756 24.332 53.005 -7.834 -3.523 0.026 C22 UH2 16 UH2 C23 C14 C 0 1 Y N N 26.764 25.589 53.591 -8.081 -4.819 0.379 C23 UH2 17 UH2 C24 C15 C 0 1 Y N N 25.947 26.607 53.109 -7.062 -5.627 0.863 C24 UH2 18 UH2 C25 C16 C 0 1 Y N N 25.104 26.390 52.030 -5.781 -5.134 0.995 C25 UH2 19 UH2 C26 C17 C 0 1 Y N N 23.676 19.919 46.678 -0.868 1.349 0.048 C26 UH2 20 UH2 C28 C18 C 0 1 N N R 23.238 18.601 44.553 1.038 2.975 -0.038 C28 UH2 21 UH2 C29 C19 C 0 1 N N R 24.620 17.977 44.448 1.237 3.589 1.365 C29 UH2 22 UH2 C31 C20 C 0 1 N N S 24.275 16.548 43.997 2.628 3.080 1.804 C31 UH2 23 UH2 C33 C21 C 0 1 N N S 22.794 16.386 44.362 3.105 2.218 0.614 C33 UH2 24 UH2 C35 C22 C 0 1 N N N 22.530 15.173 45.236 3.873 0.994 1.117 C35 UH2 25 UH2 C37 C23 C 0 1 N N N 21.141 13.902 43.185 5.408 -1.310 0.489 C37 UH2 26 UH2 C8 C24 C 0 1 Y N N 22.070 23.124 45.914 -3.703 3.290 -1.210 C8 UH2 27 UH2 N11 N2 N 0 1 Y N N 21.886 21.161 43.908 -1.369 4.675 -1.123 N11 UH2 28 UH2 N18 N3 N 0 1 Y N N 24.384 24.588 50.402 -4.367 -3.041 0.652 N18 UH2 29 UH2 N21 N4 N 0 1 Y N N 25.697 22.942 51.172 -6.002 -1.786 -0.111 N21 UH2 30 UH2 N27 N5 N 0 1 Y N N 23.141 19.766 45.419 -0.361 2.584 -0.230 N27 UH2 31 UH2 N7 N6 N 0 1 N N N 22.123 24.104 46.797 -4.901 2.600 -1.261 N7 UH2 32 UH2 N9 N7 N 0 1 Y N N 21.451 23.369 44.741 -3.630 4.560 -1.597 N9 UH2 33 UH2 O30 O3 O 0 1 N N N 25.446 18.644 43.498 1.223 5.017 1.293 O30 UH2 34 UH2 O32 O4 O 0 1 N N N 24.422 16.412 42.586 3.519 4.178 2.016 O32 UH2 35 UH2 O34 O5 O 0 1 N N N 22.419 17.582 45.072 1.892 1.810 -0.055 O34 UH2 36 UH2 S36 S1 S 0 1 N N N 22.606 13.659 44.235 4.547 0.080 -0.297 S36 UH2 37 UH2 H1 H1 H 0 1 N N N 18.515 14.282 42.253 8.348 -3.605 1.371 H1 UH2 38 UH2 H2 H2 H 0 1 N N N 17.906 13.901 40.787 8.549 -2.355 0.293 H2 UH2 39 UH2 H4 H4 H 0 1 N N N 20.261 14.237 40.587 6.075 -3.901 0.722 H4 UH2 40 UH2 H5 H5 H 0 1 N N N 20.471 11.954 42.602 6.755 -1.604 -1.167 H5 UH2 41 UH2 H6 H6 H 0 1 N N N 21.828 12.609 41.623 5.264 -2.573 -1.250 H6 UH2 42 UH2 H7 H7 H 0 1 N N N 20.794 10.949 39.063 6.839 -5.761 -2.244 H7 UH2 43 UH2 H8 H8 H 0 1 N N N 20.893 22.648 42.909 -2.472 6.253 -1.869 H8 UH2 44 UH2 H9 H9 H 0 1 N N N 27.392 23.546 53.384 -8.634 -2.902 -0.349 H9 UH2 45 UH2 H10 H10 H 0 1 N N N 27.413 25.780 54.433 -9.080 -5.219 0.282 H10 UH2 46 UH2 H11 H11 H 0 1 N N N 25.970 27.578 53.581 -7.274 -6.650 1.138 H11 UH2 47 UH2 H12 H12 H 0 1 N N N 24.469 27.178 51.652 -4.992 -5.768 1.372 H12 UH2 48 UH2 H13 H13 H 0 1 N N N 24.232 19.163 47.213 -0.302 0.518 0.441 H13 UH2 49 UH2 H14 H14 H 0 1 N N N 22.902 18.873 43.541 1.343 3.681 -0.811 H14 UH2 50 UH2 H15 H15 H 0 1 N N N 25.095 17.948 45.440 0.467 3.235 2.050 H15 UH2 51 UH2 H16 H16 H 0 1 N N N 24.886 15.817 44.547 2.546 2.474 2.706 H16 UH2 52 UH2 H17 H17 H 0 1 N N N 22.207 16.296 43.436 3.729 2.809 -0.057 H17 UH2 53 UH2 H18 H18 H 0 1 N N N 21.531 15.261 45.689 4.689 1.318 1.763 H18 UH2 54 UH2 H19 H19 H 0 1 N N N 23.290 15.124 46.030 3.199 0.348 1.680 H19 UH2 55 UH2 H20 H20 H 0 1 N N N 21.253 14.872 42.679 4.695 -1.899 1.067 H20 UH2 56 UH2 H21 H21 H 0 1 N N N 20.262 13.933 43.845 6.186 -0.929 1.150 H21 UH2 57 UH2 H22 H22 H 0 1 N N N 23.706 25.059 49.838 -3.484 -3.319 0.940 H22 UH2 58 UH2 H24 H24 H 0 1 N N N 21.668 24.913 46.425 -4.940 1.674 -0.975 H24 UH2 59 UH2 H25 H25 H 0 1 N N N 21.663 23.820 47.638 -5.702 3.043 -1.582 H25 UH2 60 UH2 H26 H26 H 0 1 N N N 25.640 19.521 43.807 1.344 5.455 2.146 H26 UH2 61 UH2 H27 H27 H 0 1 N N N 25.337 16.511 42.352 3.267 4.752 2.752 H27 UH2 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UH2 O C DOUB N N 1 UH2 OXT C SING N N 2 UH2 C CA SING N N 3 UH2 CA N SING N N 4 UH2 CA CB SING N N 5 UH2 CB C37 SING N N 6 UH2 O32 C31 SING N N 7 UH2 C37 S36 SING N N 8 UH2 O30 C29 SING N N 9 UH2 C10 N11 DOUB Y N 10 UH2 C10 N9 SING Y N 11 UH2 N11 C12 SING Y N 12 UH2 C31 C33 SING N N 13 UH2 C31 C29 SING N N 14 UH2 S36 C35 SING N N 15 UH2 C33 O34 SING N N 16 UH2 C33 C35 SING N N 17 UH2 C29 C28 SING N N 18 UH2 C28 O34 SING N N 19 UH2 C28 N27 SING N N 20 UH2 N9 C8 DOUB Y N 21 UH2 C12 N27 SING Y N 22 UH2 C12 C13 DOUB Y N 23 UH2 N27 C26 SING Y N 24 UH2 C8 C13 SING Y N 25 UH2 C8 N7 SING N N 26 UH2 C13 C14 SING Y N 27 UH2 C26 C14 DOUB Y N 28 UH2 C14 C15 SING N N 29 UH2 C15 C16 TRIP N N 30 UH2 C16 C17 SING N N 31 UH2 C17 N18 SING Y N 32 UH2 C17 N21 DOUB Y N 33 UH2 N18 C19 SING Y N 34 UH2 N21 C20 SING Y N 35 UH2 C19 C20 DOUB Y N 36 UH2 C19 C25 SING Y N 37 UH2 C20 C22 SING Y N 38 UH2 C25 C24 DOUB Y N 39 UH2 C22 C23 DOUB Y N 40 UH2 C24 C23 SING Y N 41 UH2 N H1 SING N N 42 UH2 N H2 SING N N 43 UH2 CA H4 SING N N 44 UH2 CB H5 SING N N 45 UH2 CB H6 SING N N 46 UH2 OXT H7 SING N N 47 UH2 C10 H8 SING N N 48 UH2 C22 H9 SING N N 49 UH2 C23 H10 SING N N 50 UH2 C24 H11 SING N N 51 UH2 C25 H12 SING N N 52 UH2 C26 H13 SING N N 53 UH2 C28 H14 SING N N 54 UH2 C29 H15 SING N N 55 UH2 C31 H16 SING N N 56 UH2 C33 H17 SING N N 57 UH2 C35 H18 SING N N 58 UH2 C35 H19 SING N N 59 UH2 C37 H20 SING N N 60 UH2 C37 H21 SING N N 61 UH2 N18 H22 SING N N 62 UH2 N7 H24 SING N N 63 UH2 N7 H25 SING N N 64 UH2 O30 H26 SING N N 65 UH2 O32 H27 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UH2 InChI InChI 1.06 "InChI=1S/C24H25N7O5S/c25-13(24(34)35)7-8-37-10-16-19(32)20(33)23(36-16)31-9-12(18-21(26)27-11-28-22(18)31)5-6-17-29-14-3-1-2-4-15(14)30-17/h1-4,9,11,13,16,19-20,23,32-33H,7-8,10,25H2,(H,29,30)(H,34,35)(H2,26,27,28)/t13-,16+,19+,20+,23+/m0/s1" UH2 InChIKey InChI 1.06 PYEFDSOFRINBSR-IMYLTZEYSA-N UH2 SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cc(C#Cc3[nH]c4ccccc4n3)c5c(N)ncnc25)C(O)=O" UH2 SMILES CACTVS 3.385 "N[CH](CCSC[CH]1O[CH]([CH](O)[CH]1O)n2cc(C#Cc3[nH]c4ccccc4n3)c5c(N)ncnc25)C(O)=O" UH2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)[nH]c(n2)C#Cc3cn(c4c3c(ncn4)N)[C@H]5[C@@H]([C@@H]([C@H](O5)CSCC[C@@H](C(=O)O)N)O)O" UH2 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)[nH]c(n2)C#Cc3cn(c4c3c(ncn4)N)C5C(C(C(O5)CSCCC(C(=O)O)N)O)O" # _pdbx_chem_comp_identifier.comp_id UH2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[4-azanyl-5-[2-(1~{H}-benzimidazol-2-yl)ethynyl]pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UH2 "Create component" 2023-02-03 PDBE UH2 "Initial release" 2023-04-05 RCSB #