data_UHC # _chem_comp.id UHC _chem_comp.name "~{S}-[2-[3-[[(2~{S})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] 3-oxidanylideneoctanethioate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H35 N2 O9 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-02 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 498.528 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UHC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8JFG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UHC C1 C1 C 0 1 N N N N N N -57.464 -10.656 46.848 -6.029 -0.396 -0.672 C1 UHC 1 UHC O1 O1 O 0 1 N N N N N N -58.290 -11.557 46.894 -5.810 -0.004 0.455 O1 UHC 2 UHC S1 S1 S 0 1 N N N N N N -57.691 -8.935 47.077 -4.746 -0.998 -1.634 S1 UHC 3 UHC C2 C2 C 0 1 N N N N N N -56.043 -11.071 46.543 -7.431 -0.361 -1.223 C2 UHC 4 UHC C3 C3 C 0 1 N N N N N N -56.214 -12.062 45.405 -8.365 0.202 -0.183 C3 UHC 5 UHC O3 O2 O 0 1 N N N N N N -56.747 -13.155 45.553 -7.937 0.538 0.895 O3 UHC 6 UHC C4 C4 C 0 1 N N N N N N -55.679 -11.565 44.077 -9.834 0.344 -0.488 C4 UHC 7 UHC C5 C5 C 0 1 N N N N N N -54.591 -10.579 44.438 -10.552 0.934 0.727 C5 UHC 8 UHC C6 C6 C 0 1 N N N N N N -53.941 -10.071 43.161 -12.044 1.079 0.418 C6 UHC 9 UHC C7 C7 C 0 1 N N N N N N -53.110 -8.892 43.652 -12.762 1.670 1.633 C7 UHC 10 UHC C8 C8 C 0 1 N N N N N N -53.909 -8.159 44.746 -14.253 1.814 1.323 C8 UHC 11 UHC O23 O3 O 0 1 N N N N N N -50.643 0.615 55.542 8.739 2.029 -1.455 O23 UHC 12 UHC P24 P1 P 0 1 N N N N N N -51.431 -0.019 56.656 7.627 2.584 -0.650 P24 UHC 13 UHC O26 O4 O 0 1 N N N N N N -52.739 0.767 57.181 6.349 2.829 -1.598 O26 UHC 14 UHC O27 O5 O 0 1 N N N N N N -51.904 -1.520 56.319 7.239 1.544 0.516 O27 UHC 15 UHC C28 C9 C 0 1 N N N N N N -50.838 -2.437 56.050 6.892 0.182 0.261 C28 UHC 16 UHC C29 C10 C 0 1 N N N N N N -50.789 -3.054 54.642 6.580 -0.522 1.583 C29 UHC 17 UHC C30 C11 C 0 1 N N N N N N -49.449 -3.844 54.564 7.811 -0.471 2.490 C30 UHC 18 UHC C31 C12 C 0 1 N N N N N N -50.731 -1.902 53.628 5.409 0.182 2.272 C31 UHC 19 UHC C32 C13 C 0 1 N N S N N N -52.132 -3.855 54.445 6.209 -1.981 1.309 C32 UHC 20 UHC O33 O6 O 0 1 N N N N N N -52.614 -4.450 55.661 7.345 -2.671 0.785 O33 UHC 21 UHC C34 C14 C 0 1 N N N N N N -52.168 -4.950 53.349 5.083 -2.033 0.309 C34 UHC 22 UHC O35 O7 O 0 1 N N N N N N -51.648 -6.030 53.582 5.296 -2.405 -0.825 O35 UHC 23 UHC N36 N1 N 0 1 N N N N N N -52.781 -4.736 52.164 3.839 -1.668 0.676 N36 UHC 24 UHC C37 C15 C 0 1 N N N N N N -52.793 -5.822 51.176 2.723 -1.825 -0.261 C37 UHC 25 UHC C38 C16 C 0 1 N N N N N N -54.126 -5.916 50.408 1.431 -1.338 0.398 C38 UHC 26 UHC C39 C17 C 0 1 N N N N N N -53.880 -6.550 49.030 0.284 -1.499 -0.565 C39 UHC 27 UHC O40 O8 O 0 1 N N N N N N -52.757 -6.496 48.513 0.480 -1.959 -1.671 O40 UHC 28 UHC N41 N2 N 0 1 N N N N N N -54.916 -7.148 48.425 -0.961 -1.133 -0.199 N41 UHC 29 UHC C42 C18 C 0 1 N N N N N N -56.296 -7.279 48.908 -2.076 -1.290 -1.136 C42 UHC 30 UHC C43 C19 C 0 1 N N N N N N -56.788 -8.708 48.647 -3.368 -0.803 -0.477 C43 UHC 31 UHC O2 O9 O 0 1 N Y N N N N -51.148 0.168 57.938 8.085 3.981 0.007 O2 UHC 32 UHC H1 H1 H 0 1 N N N N N N -55.574 -11.549 47.416 -7.456 0.269 -2.112 H1 UHC 33 UHC H2 H2 H 0 1 N N N N N N -55.438 -10.208 46.228 -7.744 -1.371 -1.485 H2 UHC 34 UHC H3 H3 H 0 1 N N N N N N -56.474 -11.069 43.501 -9.965 1.005 -1.344 H3 UHC 35 UHC H4 H4 H 0 1 N N N N N N -55.266 -12.399 43.490 -10.254 -0.636 -0.717 H4 UHC 36 UHC H5 H5 H 0 1 N N N N N N -53.835 -11.076 45.064 -10.421 0.273 1.584 H5 UHC 37 UHC H6 H6 H 0 1 N N N N N N -55.027 -9.734 44.991 -10.132 1.914 0.956 H6 UHC 38 UHC H7 H7 H 0 1 N N N N N N -54.699 -9.746 42.433 -12.175 1.740 -0.439 H7 UHC 39 UHC H8 H8 H 0 1 N N N N N N -53.303 -10.843 42.706 -12.464 0.099 0.189 H8 UHC 40 UHC H9 H9 H 0 1 N N N N N N -52.158 -9.255 44.067 -12.631 1.008 2.489 H9 UHC 41 UHC H10 H10 H 0 1 N N N N N N -52.908 -8.206 42.816 -12.342 2.649 1.862 H10 UHC 42 UHC H11 H11 H 0 1 N N N N N N -53.326 -7.302 45.115 -14.384 2.475 0.467 H11 UHC 43 UHC H12 H12 H 0 1 N N N N N N -54.861 -7.801 44.327 -14.673 0.834 1.094 H12 UHC 44 UHC H13 H13 H 0 1 N N N N N N -54.111 -8.850 45.577 -14.765 2.235 2.189 H13 UHC 45 UHC H14 H14 H 0 1 N N N N N N -52.844 1.572 56.688 5.581 3.192 -1.136 H14 UHC 46 UHC H15 H15 H 0 1 N N N N N N -50.920 -3.263 56.772 6.015 0.145 -0.386 H15 UHC 47 UHC H16 H16 H 0 1 N N N N N N -49.891 -1.902 56.211 7.726 -0.320 -0.230 H16 UHC 48 UHC H17 H17 H 0 1 N N N N N N -49.470 -4.675 55.284 8.107 0.567 2.643 H17 UHC 49 UHC H18 H18 H 0 1 N N N N N N -49.317 -4.243 53.547 7.573 -0.926 3.452 H18 UHC 50 UHC H19 H19 H 0 1 N N N N N N -48.613 -3.172 54.805 8.630 -1.017 2.023 H19 UHC 51 UHC H20 H20 H 0 1 N N N N N N -49.795 -1.341 53.763 4.572 0.258 1.578 H20 UHC 52 UHC H21 H21 H 0 1 N N N N N N -50.770 -2.310 52.607 5.105 -0.392 3.147 H21 UHC 53 UHC H22 H22 H 0 1 N N N N N N -51.587 -1.230 53.787 5.717 1.181 2.581 H22 UHC 54 UHC H23 H23 H 0 1 N N N N N N -52.876 -3.105 54.139 5.892 -2.456 2.238 H23 UHC 55 UHC H24 H24 H 0 1 N N N N N N -52.538 -5.395 55.603 7.681 -2.302 -0.044 H24 UHC 56 UHC H25 H25 H 0 1 N N N N N N -53.216 -3.858 51.965 3.681 -1.300 1.559 H25 UHC 57 UHC H26 H26 H 0 1 N N N N N N -52.621 -6.774 51.699 2.917 -1.237 -1.158 H26 UHC 58 UHC H27 H27 H 0 1 N N N N N N -51.982 -5.648 50.453 2.620 -2.876 -0.530 H27 UHC 59 UHC H28 H28 H 0 1 N N N N N N -54.546 -4.908 50.278 1.237 -1.925 1.296 H28 UHC 60 UHC H29 H29 H 0 1 N N N N N N -54.834 -6.537 50.976 1.534 -0.287 0.667 H29 UHC 61 UHC H30 H30 H 0 1 N N N N N N -54.725 -7.556 47.532 -1.118 -0.766 0.685 H30 UHC 62 UHC H31 H31 H 0 1 N N N N N N -56.329 -7.070 49.987 -1.882 -0.703 -2.033 H31 UHC 63 UHC H32 H32 H 0 1 N N N N N N -56.941 -6.565 48.376 -2.179 -2.342 -1.405 H32 UHC 64 UHC H33 H33 H 0 1 N N N N N N -57.458 -8.995 49.471 -3.265 0.248 -0.207 H33 UHC 65 UHC H34 H34 H 0 1 N N N N N N -55.913 -9.374 48.637 -3.562 -1.391 0.421 H34 UHC 66 UHC H35 H35 H 0 1 N N N N N N -50.397 0.745 58.016 8.334 4.656 -0.639 H35 UHC 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UHC C6 C7 SING N N 1 UHC C6 C5 SING N N 2 UHC C7 C8 SING N N 3 UHC C4 C5 SING N N 4 UHC C4 C3 SING N N 5 UHC C3 O3 DOUB N N 6 UHC C3 C2 SING N N 7 UHC C2 C1 SING N N 8 UHC C1 O1 DOUB N N 9 UHC C1 S1 SING N N 10 UHC S1 C43 SING N N 11 UHC N41 C42 SING N N 12 UHC N41 C39 SING N N 13 UHC O40 C39 DOUB N N 14 UHC C43 C42 SING N N 15 UHC C39 C38 SING N N 16 UHC C38 C37 SING N N 17 UHC C37 N36 SING N N 18 UHC N36 C34 SING N N 19 UHC C34 O35 DOUB N N 20 UHC C34 C32 SING N N 21 UHC C31 C29 SING N N 22 UHC C32 C29 SING N N 23 UHC C32 O33 SING N N 24 UHC C30 C29 SING N N 25 UHC C29 C28 SING N N 26 UHC O23 P24 DOUB N N 27 UHC C28 O27 SING N N 28 UHC O27 P24 SING N N 29 UHC P24 O26 SING N N 30 UHC P24 O2 SING N N 31 UHC C2 H1 SING N N 32 UHC C2 H2 SING N N 33 UHC C4 H3 SING N N 34 UHC C4 H4 SING N N 35 UHC C5 H5 SING N N 36 UHC C5 H6 SING N N 37 UHC C6 H7 SING N N 38 UHC C6 H8 SING N N 39 UHC C7 H9 SING N N 40 UHC C7 H10 SING N N 41 UHC C8 H11 SING N N 42 UHC C8 H12 SING N N 43 UHC C8 H13 SING N N 44 UHC O26 H14 SING N N 45 UHC C28 H15 SING N N 46 UHC C28 H16 SING N N 47 UHC C30 H17 SING N N 48 UHC C30 H18 SING N N 49 UHC C30 H19 SING N N 50 UHC C31 H20 SING N N 51 UHC C31 H21 SING N N 52 UHC C31 H22 SING N N 53 UHC C32 H23 SING N N 54 UHC O33 H24 SING N N 55 UHC N36 H25 SING N N 56 UHC C37 H26 SING N N 57 UHC C37 H27 SING N N 58 UHC C38 H28 SING N N 59 UHC C38 H29 SING N N 60 UHC N41 H30 SING N N 61 UHC C42 H31 SING N N 62 UHC C42 H32 SING N N 63 UHC C43 H33 SING N N 64 UHC C43 H34 SING N N 65 UHC O2 H35 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UHC InChI InChI 1.06 "InChI=1S/C19H35N2O9PS/c1-4-5-6-7-14(22)12-16(24)32-11-10-20-15(23)8-9-21-18(26)17(25)19(2,3)13-30-31(27,28)29/h17,25H,4-13H2,1-3H3,(H,20,23)(H,21,26)(H2,27,28,29)/t17-/m1/s1" UHC InChIKey InChI 1.06 HGKMRNVHDOTSFB-QGZVFWFLSA-N UHC SMILES_CANONICAL CACTVS 3.385 "CCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@@H](O)C(C)(C)CO[P](O)(O)=O" UHC SMILES CACTVS 3.385 "CCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O" UHC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](C(C)(C)COP(=O)(O)O)O" UHC SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O" # _pdbx_chem_comp_identifier.comp_id UHC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{S}-[2-[3-[[(2~{S})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] 3-oxidanylideneoctanethioate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UHC "Create component" 2023-06-02 PDBJ UHC "Initial release" 2023-11-15 RCSB UHC "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id UHC _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom P24 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #