data_UIO # _chem_comp.id UIO _chem_comp.name "(2R,3R,4R,5S)-2-(hydroxymethyl)-1-[6-({(4M)-4-[2-(morpholin-4-yl)pyrimidin-4-yl]-2-nitrophenyl}amino)hexyl]piperidine-3,4,5-triol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H38 N6 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-19 _chem_comp.pdbx_modified_date 2023-02-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 546.616 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UIO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8E4K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UIO N1 N1 N 0 1 N N N -7.166 -40.220 -32.896 -7.896 0.068 0.029 N1 UIO 1 UIO N3 N2 N 1 1 N N N -13.252 -37.892 -38.580 2.975 2.651 -0.386 N3 UIO 2 UIO C4 C1 C 0 1 N N N -7.862 -39.342 -33.358 -6.706 0.898 -0.197 C4 UIO 3 UIO C5 C2 C 0 1 N N N -8.788 -39.838 -34.491 -5.447 0.057 0.026 C5 UIO 4 UIO C6 C3 C 0 1 N N N -9.245 -38.763 -35.448 -4.207 0.922 -0.209 C6 UIO 5 UIO C7 C4 C 0 1 N N N -8.646 -38.950 -36.839 -2.949 0.081 0.014 C7 UIO 6 UIO C8 C5 C 0 1 N N N -9.636 -39.664 -37.758 -1.709 0.946 -0.221 C8 UIO 7 UIO C10 C6 C 0 1 Y N N -11.236 -37.357 -39.914 2.009 0.381 -0.078 C10 UIO 8 UIO C13 C7 C 0 1 Y N N -12.238 -34.763 -40.382 4.537 -0.715 0.212 C13 UIO 9 UIO C15 C8 C 0 1 Y N N -14.739 -31.973 -40.861 8.181 -1.052 0.426 C15 UIO 10 UIO C17 C9 C 0 1 N N N -18.298 -33.168 -41.129 10.503 1.460 -0.952 C17 UIO 11 UIO C20 C10 C 0 1 Y N N -12.649 -31.093 -41.406 7.329 -3.173 0.726 C20 UIO 12 UIO C21 C11 C 0 1 Y N N -12.031 -32.315 -41.126 6.047 -2.672 0.588 C21 UIO 13 UIO C22 C12 C 0 1 Y N N -11.013 -35.165 -40.923 3.408 -1.531 0.291 C22 UIO 14 UIO C24 C13 C 0 1 N N N -6.065 -40.534 -33.814 -7.982 -1.010 -0.964 C24 UIO 15 UIO C26 C14 C 0 1 N N R -5.698 -42.660 -32.713 -10.449 -1.130 -0.595 C26 UIO 16 UIO C1 C15 C 0 1 N N R -6.844 -42.440 -31.833 -10.315 0.016 0.412 C1 UIO 17 UIO C11 C16 C 0 1 Y N N -12.461 -36.965 -39.392 3.132 1.198 -0.152 C11 UIO 18 UIO C12 C17 C 0 1 Y N N -12.957 -35.681 -39.626 4.390 0.655 -0.008 C12 UIO 19 UIO C14 C18 C 0 1 Y N N -12.836 -33.364 -40.671 5.889 -1.300 0.367 C14 UIO 20 UIO C16 C19 C 0 1 N N N -17.156 -32.742 -40.178 9.299 0.514 -0.928 C16 UIO 21 UIO C18 C20 C 0 1 N N N -18.185 -31.057 -42.208 11.722 -0.025 0.478 C18 UIO 22 UIO C19 C21 C 0 1 N N N -16.961 -30.642 -41.353 10.531 -0.986 0.516 C19 UIO 23 UIO C2 C22 C 0 1 N N R -7.898 -41.444 -32.459 -9.116 0.886 0.031 C2 UIO 24 UIO C23 C23 C 0 1 Y N N -10.508 -36.449 -40.694 2.152 -0.984 0.147 C23 UIO 25 UIO C25 C24 C 0 1 N N S -5.071 -41.405 -33.072 -9.148 -1.938 -0.612 C25 UIO 26 UIO C3 C25 C 0 1 N N N -9.024 -41.189 -31.534 -8.966 2.021 1.046 C3 UIO 27 UIO C9 C26 C 0 1 N N N -9.510 -39.182 -39.201 -0.451 0.104 0.002 C9 UIO 28 UIO N2 N3 N 0 1 N N N -10.801 -38.737 -39.650 0.737 0.932 -0.223 N2 UIO 29 UIO N4 N4 N 0 1 Y N N -14.167 -33.156 -40.580 6.972 -0.530 0.293 N4 UIO 30 UIO N5 N5 N 0 1 N N N -16.200 -31.755 -40.730 9.287 -0.223 0.344 N5 UIO 31 UIO N6 N6 N 0 1 Y N N -13.970 -30.968 -41.267 8.360 -2.348 0.641 N6 UIO 32 UIO O1 O1 O 0 1 N N N -7.458 -43.686 -31.566 -11.505 0.808 0.394 O1 UIO 33 UIO O2 O2 O 0 1 N N N -8.612 -40.473 -30.383 -8.833 1.472 2.359 O2 UIO 34 UIO O3 O3 O -1 1 N N N -12.870 -39.261 -38.354 3.774 3.244 -1.089 O3 UIO 35 UIO O4 O4 O 0 1 N N N -14.432 -37.375 -38.014 2.048 3.254 0.124 O4 UIO 36 UIO O5 O5 O 0 1 N N N -18.981 -32.122 -41.753 11.701 0.705 -0.752 O5 UIO 37 UIO O6 O6 O 0 1 N N N -3.879 -41.531 -33.957 -9.244 -2.975 -1.590 O6 UIO 38 UIO O7 O7 O 0 1 N N N -4.789 -43.477 -31.848 -11.532 -1.979 -0.211 O7 UIO 39 UIO H2 H2 H 0 1 N N N -7.210 -38.552 -33.759 -6.714 1.275 -1.220 H2 UIO 40 UIO H3 H3 H 0 1 N N N -8.485 -38.928 -32.552 -6.710 1.737 0.498 H3 UIO 41 UIO H4 H4 H 0 1 N N N -9.680 -40.290 -34.032 -5.439 -0.319 1.049 H4 UIO 42 UIO H5 H5 H 0 1 N N N -8.245 -40.602 -35.067 -5.443 -0.782 -0.669 H5 UIO 43 UIO H6 H6 H 0 1 N N N -8.936 -37.783 -35.056 -4.216 1.298 -1.232 H6 UIO 44 UIO H7 H7 H 0 1 N N N -10.342 -38.798 -35.525 -4.212 1.761 0.486 H7 UIO 45 UIO H8 H8 H 0 1 N N N -7.728 -39.551 -36.760 -2.941 -0.295 1.037 H8 UIO 46 UIO H9 H9 H 0 1 N N N -8.404 -37.965 -37.264 -2.944 -0.758 -0.681 H9 UIO 47 UIO H10 H10 H 0 1 N N N -10.658 -39.467 -37.404 -1.717 1.322 -1.244 H10 UIO 48 UIO H11 H11 H 0 1 N N N -9.438 -40.746 -37.724 -1.714 1.785 0.474 H11 UIO 49 UIO H12 H12 H 0 1 N N N -19.027 -33.748 -40.545 10.549 1.967 -1.916 H12 UIO 50 UIO H13 H13 H 0 1 N N N -12.058 -30.251 -41.734 7.486 -4.227 0.902 H13 UIO 51 UIO H14 H14 H 0 1 N N N -10.967 -32.445 -41.257 5.189 -3.324 0.653 H14 UIO 52 UIO H15 H15 H 0 1 N N N -10.447 -34.472 -41.528 3.519 -2.591 0.466 H15 UIO 53 UIO H16 H16 H 0 1 N N N -5.576 -39.605 -34.142 -8.145 -0.582 -1.953 H16 UIO 54 UIO H17 H17 H 0 1 N N N -6.452 -41.073 -34.691 -7.052 -1.579 -0.963 H17 UIO 55 UIO H18 H18 H 0 1 N N N -5.991 -43.229 -33.608 -10.639 -0.722 -1.587 H18 UIO 56 UIO H19 H19 H 0 1 N N N -6.490 -41.995 -30.891 -10.165 -0.393 1.411 H19 UIO 57 UIO H20 H20 H 0 1 N N N -13.914 -35.397 -39.213 5.262 1.290 -0.066 H20 UIO 58 UIO H21 H21 H 0 1 N N N -17.611 -32.305 -39.277 8.380 1.092 -1.023 H21 UIO 59 UIO H22 H22 H 0 1 N N N -17.809 -31.333 -43.204 11.656 0.670 1.315 H22 UIO 60 UIO H23 H23 H 0 1 N N N -16.271 -30.083 -42.001 10.626 -1.715 -0.289 H23 UIO 61 UIO H24 H24 H 0 1 N N N -8.302 -41.933 -33.358 -9.273 1.306 -0.963 H24 UIO 62 UIO H25 H25 H 0 1 N N N -9.558 -36.740 -41.118 1.278 -1.616 0.209 H25 UIO 63 UIO H26 H26 H 0 1 N N N -4.771 -40.878 -32.154 -8.979 -2.378 0.371 H26 UIO 64 UIO H27 H27 H 0 1 N N N -9.791 -40.603 -32.061 -8.080 2.609 0.806 H27 UIO 65 UIO H28 H28 H 0 1 N N N -9.451 -42.153 -31.219 -9.848 2.661 1.008 H28 UIO 66 UIO H29 H29 H 0 1 N N N -9.160 -40.008 -39.838 -0.442 -0.272 1.025 H29 UIO 67 UIO H30 H30 H 0 1 N N N -8.793 -38.350 -39.252 -0.446 -0.735 -0.693 H30 UIO 68 UIO H31 H31 H 0 1 N N N -11.441 -39.078 -38.962 0.638 1.864 -0.474 H31 UIO 69 UIO H32 H32 H 0 1 N N N -8.205 -43.555 -30.994 -12.306 0.318 0.624 H32 UIO 70 UIO H33 H33 H 0 1 N N N -9.360 -40.329 -29.815 -8.734 2.136 3.055 H33 UIO 71 UIO H34 H34 H 0 1 N N N -3.224 -42.072 -33.532 -8.452 -3.526 -1.658 H34 UIO 72 UIO H35 H35 H 0 1 N N N -5.216 -44.295 -31.623 -11.675 -2.728 -0.806 H35 UIO 73 UIO H1 H1 H 0 1 N N N -17.866 -33.806 -41.914 10.401 2.199 -0.157 H1 UIO 74 UIO H36 H36 H 0 1 N N N -16.590 -33.644 -39.903 9.374 -0.190 -1.757 H36 UIO 75 UIO H37 H37 H 0 1 N N N -18.837 -30.175 -42.294 12.650 -0.593 0.548 H37 UIO 76 UIO H38 H38 H 0 1 N N N -17.320 -29.986 -40.547 10.511 -1.503 1.475 H38 UIO 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UIO C18 O5 SING N N 1 UIO C18 C19 SING N N 2 UIO O5 C17 SING N N 3 UIO C20 N6 DOUB Y N 4 UIO C20 C21 SING Y N 5 UIO C19 N5 SING N N 6 UIO N6 C15 SING Y N 7 UIO C17 C16 SING N N 8 UIO C21 C14 DOUB Y N 9 UIO C22 C23 DOUB Y N 10 UIO C22 C13 SING Y N 11 UIO C15 N5 SING N N 12 UIO C15 N4 DOUB Y N 13 UIO N5 C16 SING N N 14 UIO C23 C10 SING Y N 15 UIO C14 N4 SING Y N 16 UIO C14 C13 SING N N 17 UIO C13 C12 DOUB Y N 18 UIO C10 N2 SING N N 19 UIO C10 C11 DOUB Y N 20 UIO N2 C9 SING N N 21 UIO C12 C11 SING Y N 22 UIO C11 N3 SING N N 23 UIO C9 C8 SING N N 24 UIO N3 O3 SING N N 25 UIO N3 O4 DOUB N N 26 UIO C8 C7 SING N N 27 UIO C7 C6 SING N N 28 UIO C6 C5 SING N N 29 UIO C5 C4 SING N N 30 UIO O6 C25 SING N N 31 UIO C24 C25 SING N N 32 UIO C24 N1 SING N N 33 UIO C4 N1 SING N N 34 UIO C25 C26 SING N N 35 UIO N1 C2 SING N N 36 UIO C26 O7 SING N N 37 UIO C26 C1 SING N N 38 UIO C2 C1 SING N N 39 UIO C2 C3 SING N N 40 UIO C1 O1 SING N N 41 UIO C3 O2 SING N N 42 UIO C4 H2 SING N N 43 UIO C4 H3 SING N N 44 UIO C5 H4 SING N N 45 UIO C5 H5 SING N N 46 UIO C6 H6 SING N N 47 UIO C6 H7 SING N N 48 UIO C7 H8 SING N N 49 UIO C7 H9 SING N N 50 UIO C8 H10 SING N N 51 UIO C8 H11 SING N N 52 UIO C17 H12 SING N N 53 UIO C20 H13 SING N N 54 UIO C21 H14 SING N N 55 UIO C22 H15 SING N N 56 UIO C24 H16 SING N N 57 UIO C24 H17 SING N N 58 UIO C26 H18 SING N N 59 UIO C1 H19 SING N N 60 UIO C12 H20 SING N N 61 UIO C16 H21 SING N N 62 UIO C18 H22 SING N N 63 UIO C19 H23 SING N N 64 UIO C2 H24 SING N N 65 UIO C23 H25 SING N N 66 UIO C25 H26 SING N N 67 UIO C3 H27 SING N N 68 UIO C3 H28 SING N N 69 UIO C9 H29 SING N N 70 UIO C9 H30 SING N N 71 UIO N2 H31 SING N N 72 UIO O1 H32 SING N N 73 UIO O2 H33 SING N N 74 UIO O6 H34 SING N N 75 UIO O7 H35 SING N N 76 UIO C17 H1 SING N N 77 UIO C16 H36 SING N N 78 UIO C18 H37 SING N N 79 UIO C19 H38 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UIO SMILES ACDLabs 12.01 "OCC1C(O)C(O)C(O)CN1CCCCCCNc1ccc(cc1[N+]([O-])=O)c1nc(ncc1)N1CCOCC1" UIO InChI InChI 1.06 "InChI=1S/C26H38N6O7/c33-17-22-24(35)25(36)23(34)16-31(22)10-4-2-1-3-8-27-20-6-5-18(15-21(20)32(37)38)19-7-9-28-26(29-19)30-11-13-39-14-12-30/h5-7,9,15,22-25,27,33-36H,1-4,8,10-14,16-17H2/t22-,23+,24-,25-/m1/s1" UIO InChIKey InChI 1.06 IKJZFVDMSJZYQQ-ZFFYZDHPSA-N UIO SMILES_CANONICAL CACTVS 3.385 "OC[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)CN1CCCCCCNc2ccc(cc2[N+]([O-])=O)c3ccnc(n3)N4CCOCC4" UIO SMILES CACTVS 3.385 "OC[CH]1[CH](O)[CH](O)[CH](O)CN1CCCCCCNc2ccc(cc2[N+]([O-])=O)c3ccnc(n3)N4CCOCC4" UIO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1c2ccnc(n2)N3CCOCC3)[N+](=O)[O-])NCCCCCCN4C[C@@H]([C@H]([C@@H]([C@H]4CO)O)O)O" UIO SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1c2ccnc(n2)N3CCOCC3)[N+](=O)[O-])NCCCCCCN4CC(C(C(C4CO)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UIO "SYSTEMATIC NAME" ACDLabs 12.01 "(2R,3R,4R,5S)-2-(hydroxymethyl)-1-[6-({(4M)-4-[2-(morpholin-4-yl)pyrimidin-4-yl]-2-nitrophenyl}amino)hexyl]piperidine-3,4,5-triol" UIO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{R},5~{S})-2-(hydroxymethyl)-1-[6-[[4-(2-morpholin-4-ylpyrimidin-4-yl)-2-nitro-phenyl]amino]hexyl]piperidine-3,4,5-triol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UIO "Create component" 2022-08-19 RCSB UIO "Initial release" 2023-02-22 RCSB #