data_UIX # _chem_comp.id UIX _chem_comp.name "[(1~{S},5~{R})-3,3,5-trimethyl-5-oxidanyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{S},4~{S},6~{R})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]cyclohexyl] ethanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C42 H58 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Dinoxanthin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-06 _chem_comp.pdbx_modified_date 2024-02-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 642.907 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UIX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UIX C7 C1 C 0 1 N N N N N N ? ? ? -11.259 -0.372 0.269 C7 UIX 1 UIX C8 C2 C 0 1 N N N N N N ? ? ? -12.247 1.781 1.545 C8 UIX 2 UIX C9 C3 C 0 1 N N N N N N ? ? ? -12.892 2.608 -0.722 C9 UIX 3 UIX O1 O1 O 0 1 N N N N N N ? ? ? -16.701 1.031 -0.384 O1 UIX 4 UIX C1 C4 C 0 1 N N R N N N ? ? ? -13.488 -0.829 -0.965 C1 UIX 5 UIX C5 C5 C 0 1 N N S N N N ? ? ? -15.298 0.866 -0.600 C5 UIX 6 UIX C6 C6 C 0 1 N N N N N N ? ? ? -13.050 -2.295 -0.945 C6 UIX 7 UIX C4 C7 C 0 1 N N N N N N ? ? ? -14.529 1.314 0.648 C4 UIX 8 UIX O4 O2 O 0 1 N N N N N N ? ? ? 14.957 1.825 -0.592 O4 UIX 9 UIX C3 C8 C 0 1 N N N N N N ? ? ? -14.989 -0.609 -0.860 C3 UIX 10 UIX O3 O3 O 0 1 N N N N N N ? ? ? 10.938 2.106 -0.362 O3 UIX 11 UIX C2 C9 C 0 1 N N N N N N ? ? ? -13.052 1.464 0.283 C2 UIX 12 UIX C C10 C 0 1 N N S N N N ? ? ? -12.529 0.169 -0.335 C UIX 13 UIX O O4 O 0 1 N N N N N N ? ? ? -12.690 0.056 -1.740 O UIX 14 UIX C10 C11 C 0 1 N N N N N N ? ? ? -10.071 0.038 -0.192 C10 UIX 15 UIX C11 C12 C 0 1 N N N N N N ? ? ? -8.878 -0.471 0.375 C11 UIX 16 UIX C12 C13 C 0 1 N N N N N N ? ? ? -8.946 -1.474 1.498 C12 UIX 17 UIX C13 C14 C 0 1 N N N N N N ? ? ? -7.669 -0.054 -0.094 C13 UIX 18 UIX C14 C15 C 0 1 N N N N N N ? ? ? -6.488 -0.558 0.468 C14 UIX 19 UIX C15 C16 C 0 1 N N N N N N ? ? ? 10.903 -0.894 -1.137 C15 UIX 20 UIX C16 C17 C 0 1 N N R N N N ? ? ? 10.914 1.043 0.593 C16 UIX 21 UIX C17 C18 C 0 1 N N N N N N ? ? ? 12.339 -1.219 -0.712 C17 UIX 22 UIX C18 C19 C 0 1 N N S N N N ? ? ? 13.043 0.068 -0.278 C18 UIX 23 UIX C19 C20 C 0 1 N N N N N N ? ? ? 12.350 0.648 0.955 C19 UIX 24 UIX C20 C21 C 0 1 N N N N N N ? ? ? 10.216 -0.163 -0.004 C20 UIX 25 UIX C21 C22 C 0 1 N N N N N N ? ? ? 10.151 -2.191 -1.442 C21 UIX 26 UIX C22 C23 C 0 1 N N N N N N ? ? ? 10.923 -0.007 -2.383 C22 UIX 27 UIX C23 C24 C 0 1 N N N N N N ? ? ? -5.262 -0.135 -0.007 C23 UIX 28 UIX C24 C25 C 0 1 N N N N N N ? ? ? 10.169 1.498 1.850 C24 UIX 29 UIX C25 C26 C 0 1 N N R N N N ? ? ? 9.056 -0.563 0.445 C25 UIX 30 UIX C26 C27 C 0 1 N N N N N N ? ? ? -4.087 -0.637 0.552 C26 UIX 31 UIX C27 C28 C 0 1 N N N N N N ? ? ? 15.322 0.757 -0.162 C27 UIX 32 UIX C28 C29 C 0 1 N N N N N N ? ? ? 7.896 -0.963 0.896 C28 UIX 33 UIX O2 O5 O 0 1 N N N N N N ? ? ? 14.429 -0.225 0.041 O2 UIX 34 UIX C29 C30 C 0 1 N N N N N N ? ? ? -4.154 -1.640 1.675 C29 UIX 35 UIX C30 C31 C 0 1 N N N N N N ? ? ? -2.857 -0.213 0.075 C30 UIX 36 UIX C31 C32 C 0 1 N N N N N N ? ? ? 16.779 0.526 0.146 C31 UIX 37 UIX C32 C33 C 0 1 N N N N N N ? ? ? 6.767 -0.482 0.359 C32 UIX 38 UIX C33 C34 C 0 1 N N N N N N ? ? ? 6.835 0.521 -0.764 C33 UIX 39 UIX C34 C35 C 0 1 N N N N N N ? ? ? -1.685 -0.712 0.632 C34 UIX 40 UIX C35 C36 C 0 1 N N N N N N ? ? ? 5.511 -0.915 0.846 C35 UIX 41 UIX C36 C37 C 0 1 N N N N N N ? ? ? 4.363 -0.426 0.300 C36 UIX 42 UIX C37 C38 C 0 1 N N N N N N ? ? ? -0.451 -0.287 0.154 C37 UIX 43 UIX C38 C39 C 0 1 N N N N N N ? ? ? 3.119 -0.854 0.783 C38 UIX 44 UIX C39 C40 C 0 1 N N N N N N ? ? ? 0.717 -0.785 0.709 C39 UIX 45 UIX C40 C41 C 0 1 N N N N N N ? ? ? 1.955 -0.358 0.229 C40 UIX 46 UIX C41 C42 C 0 1 N N N N N N ? ? ? 2.023 0.645 -0.894 C41 UIX 47 UIX H1 H1 H 0 1 N N N N N N ? ? ? -11.307 -1.088 1.077 H1 UIX 48 UIX H2 H2 H 0 1 N N N N N N ? ? ? -12.613 2.708 1.986 H2 UIX 49 UIX H3 H3 H 0 1 N N N N N N ? ? ? -12.360 0.968 2.261 H3 UIX 50 UIX H4 H4 H 0 1 N N N N N N ? ? ? -11.194 1.894 1.285 H4 UIX 51 UIX H5 H5 H 0 1 N N N N N N ? ? ? -13.253 3.535 -0.277 H5 UIX 52 UIX H6 H6 H 0 1 N N N N N N ? ? ? -11.839 2.716 -0.983 H6 UIX 53 UIX H7 H7 H 0 1 N N N N N N ? ? ? -13.468 2.386 -1.620 H7 UIX 54 UIX H8 H8 H 0 1 N N N N N N ? ? ? -17.249 0.754 -1.131 H8 UIX 55 UIX H9 H9 H 0 1 N N N N N N ? ? ? -14.987 1.462 -1.458 H9 UIX 56 UIX H10 H10 H 0 1 N N N N N N ? ? ? -13.800 -2.905 -1.449 H10 UIX 57 UIX H11 H11 H 0 1 N N N N N N ? ? ? -12.094 -2.395 -1.458 H11 UIX 58 UIX H12 H12 H 0 1 N N N N N N ? ? ? -12.945 -2.628 0.088 H12 UIX 59 UIX H13 H13 H 0 1 N N N N N N ? ? ? -14.919 2.271 0.994 H13 UIX 60 UIX H14 H14 H 0 1 N N N N N N ? ? ? -14.641 0.568 1.434 H14 UIX 61 UIX H15 H15 H 0 1 N N N N N N ? ? ? -15.464 -0.916 -1.792 H15 UIX 62 UIX H16 H16 H 0 1 N N N N N N ? ? ? -15.384 -1.209 -0.040 H16 UIX 63 UIX H17 H17 H 0 1 N N N N N N ? ? ? 11.372 2.910 -0.044 H17 UIX 64 UIX H18 H18 H 0 1 N N N N N N ? ? ? -10.023 0.756 -0.997 H18 UIX 65 UIX H19 H19 H 0 1 N N N N N N ? ? ? -8.963 -2.482 1.084 H19 UIX 66 UIX H20 H20 H 0 1 N N N N N N ? ? ? -8.072 -1.360 2.140 H20 UIX 67 UIX H21 H21 H 0 1 N N N N N N ? ? ? -9.851 -1.306 2.082 H21 UIX 68 UIX H22 H22 H 0 1 N N N N N N ? ? ? -7.621 0.665 -0.898 H22 UIX 69 UIX H23 H23 H 0 1 N N N N N N ? ? ? -6.536 -1.277 1.273 H23 UIX 70 UIX H24 H24 H 0 1 N N N N N N ? ? ? 12.321 -1.922 0.120 H24 UIX 71 UIX H25 H25 H 0 1 N N N N N N ? ? ? 12.874 -1.662 -1.551 H25 UIX 72 UIX H26 H26 H 0 1 N N N N N N ? ? ? 13.005 0.794 -1.091 H26 UIX 73 UIX H27 H27 H 0 1 N N N N N N ? ? ? 12.894 1.529 1.298 H27 UIX 74 UIX H28 H28 H 0 1 N N N N N N ? ? ? 12.332 -0.099 1.748 H28 UIX 75 UIX H29 H29 H 0 1 N N N N N N ? ? ? 10.652 -2.719 -2.253 H29 UIX 76 UIX H30 H30 H 0 1 N N N N N N ? ? ? 10.138 -2.821 -0.552 H30 UIX 77 UIX H31 H31 H 0 1 N N N N N N ? ? ? 9.128 -1.958 -1.737 H31 UIX 78 UIX H32 H32 H 0 1 N N N N N N ? ? ? 9.901 0.228 -2.679 H32 UIX 79 UIX H33 H33 H 0 1 N N N N N N ? ? ? 11.459 0.916 -2.163 H33 UIX 80 UIX H34 H34 H 0 1 N N N N N N ? ? ? 11.425 -0.533 -3.195 H34 UIX 81 UIX H35 H35 H 0 1 N N N N N N ? ? ? -5.214 0.584 -0.812 H35 UIX 82 UIX H36 H36 H 0 1 N N N N N N ? ? ? 9.147 1.772 1.587 H36 UIX 83 UIX H37 H37 H 0 1 N N N N N N ? ? ? 10.152 0.686 2.576 H37 UIX 84 UIX H38 H38 H 0 1 N N N N N N ? ? ? 10.677 2.361 2.281 H38 UIX 85 UIX H39 H39 H 0 1 N N N N N N ? ? ? 7.847 -1.682 1.700 H39 UIX 86 UIX H40 H40 H 0 1 N N N N N N ? ? ? -4.172 -2.648 1.261 H40 UIX 87 UIX H41 H41 H 0 1 N N N N N N ? ? ? -3.280 -1.526 2.317 H41 UIX 88 UIX H42 H42 H 0 1 N N N N N N ? ? ? -5.059 -1.471 2.259 H42 UIX 89 UIX H43 H43 H 0 1 N N N N N N ? ? ? -2.808 0.506 -0.730 H43 UIX 90 UIX H44 H44 H 0 1 N N N N N N ? ? ? 17.346 1.429 -0.080 H44 UIX 91 UIX H45 H45 H 0 1 N N N N N N ? ? ? 16.892 0.280 1.202 H45 UIX 92 UIX H46 H46 H 0 1 N N N N N N ? ? ? 17.152 -0.299 -0.461 H46 UIX 93 UIX H47 H47 H 0 1 N N N N N N ? ? ? 6.850 -0.004 -1.719 H47 UIX 94 UIX H48 H48 H 0 1 N N N N N N ? ? ? 5.963 1.173 -0.721 H48 UIX 95 UIX H49 H49 H 0 1 N N N N N N ? ? ? 7.741 1.118 -0.663 H49 UIX 96 UIX H50 H50 H 0 1 N N N N N N ? ? ? -1.733 -1.431 1.437 H50 UIX 97 UIX H51 H51 H 0 1 N N N N N N ? ? ? 5.463 -1.634 1.651 H51 UIX 98 UIX H52 H52 H 0 1 N N N N N N ? ? ? 4.411 0.293 -0.504 H52 UIX 99 UIX H53 H53 H 0 1 N N N N N N ? ? ? -0.403 0.432 -0.651 H53 UIX 100 UIX H54 H54 H 0 1 N N N N N N ? ? ? 3.071 -1.573 1.587 H54 UIX 101 UIX H55 H55 H 0 1 N N N N N N ? ? ? 0.669 -1.504 1.514 H55 UIX 102 UIX H56 H56 H 0 1 N N N N N N ? ? ? 2.038 0.120 -1.849 H56 UIX 103 UIX H57 H57 H 0 1 N N N N N N ? ? ? 1.151 1.297 -0.851 H57 UIX 104 UIX H58 H58 H 0 1 N N N N N N ? ? ? 2.929 1.242 -0.793 H58 UIX 105 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UIX C31 C27 SING N N 1 UIX C27 O4 DOUB N N 2 UIX C27 O2 SING N N 3 UIX O2 C18 SING N N 4 UIX C18 C17 SING N N 5 UIX C18 C19 SING N N 6 UIX C17 C15 SING N N 7 UIX C19 C16 SING N N 8 UIX C15 C22 SING N N 9 UIX C15 C21 SING N N 10 UIX C15 C20 SING N N 11 UIX C16 O3 SING N N 12 UIX C16 C20 SING N N 13 UIX C16 C24 SING N N 14 UIX C20 C25 DOUB N N 15 UIX C25 C28 DOUB N N 16 UIX C33 C32 SING N N 17 UIX C28 C32 SING N N 18 UIX C32 C35 DOUB N E 19 UIX C35 C36 SING N N 20 UIX C36 C38 DOUB N E 21 UIX C41 C40 SING N N 22 UIX C38 C40 SING N N 23 UIX C40 C39 DOUB N E 24 UIX C39 C37 SING N N 25 UIX C37 C34 DOUB N E 26 UIX C34 C30 SING N N 27 UIX C30 C26 DOUB N E 28 UIX C26 C23 SING N N 29 UIX C26 C29 SING N N 30 UIX C23 C14 DOUB N E 31 UIX C14 C13 SING N N 32 UIX C13 C11 DOUB N E 33 UIX C11 C10 SING N N 34 UIX C11 C12 SING N N 35 UIX C10 C7 DOUB N E 36 UIX O C SING N N 37 UIX O C1 SING N N 38 UIX C9 C2 SING N N 39 UIX C7 C SING N N 40 UIX C C1 SING N N 41 UIX C C2 SING N N 42 UIX C6 C1 SING N N 43 UIX C1 C3 SING N N 44 UIX C5 C3 SING N N 45 UIX C5 O1 SING N N 46 UIX C5 C4 SING N N 47 UIX C2 C4 SING N N 48 UIX C2 C8 SING N N 49 UIX C7 H1 SING N N 50 UIX C8 H2 SING N N 51 UIX C8 H3 SING N N 52 UIX C8 H4 SING N N 53 UIX C9 H5 SING N N 54 UIX C9 H6 SING N N 55 UIX C9 H7 SING N N 56 UIX O1 H8 SING N N 57 UIX C5 H9 SING N N 58 UIX C6 H10 SING N N 59 UIX C6 H11 SING N N 60 UIX C6 H12 SING N N 61 UIX C4 H13 SING N N 62 UIX C4 H14 SING N N 63 UIX C3 H15 SING N N 64 UIX C3 H16 SING N N 65 UIX O3 H17 SING N N 66 UIX C10 H18 SING N N 67 UIX C12 H19 SING N N 68 UIX C12 H20 SING N N 69 UIX C12 H21 SING N N 70 UIX C13 H22 SING N N 71 UIX C14 H23 SING N N 72 UIX C17 H24 SING N N 73 UIX C17 H25 SING N N 74 UIX C18 H26 SING N N 75 UIX C19 H27 SING N N 76 UIX C19 H28 SING N N 77 UIX C21 H29 SING N N 78 UIX C21 H30 SING N N 79 UIX C21 H31 SING N N 80 UIX C22 H32 SING N N 81 UIX C22 H33 SING N N 82 UIX C22 H34 SING N N 83 UIX C23 H35 SING N N 84 UIX C24 H36 SING N N 85 UIX C24 H37 SING N N 86 UIX C24 H38 SING N N 87 UIX C28 H39 SING N N 88 UIX C29 H40 SING N N 89 UIX C29 H41 SING N N 90 UIX C29 H42 SING N N 91 UIX C30 H43 SING N N 92 UIX C31 H44 SING N N 93 UIX C31 H45 SING N N 94 UIX C31 H46 SING N N 95 UIX C33 H47 SING N N 96 UIX C33 H48 SING N N 97 UIX C33 H49 SING N N 98 UIX C34 H50 SING N N 99 UIX C35 H51 SING N N 100 UIX C36 H52 SING N N 101 UIX C37 H53 SING N N 102 UIX C38 H54 SING N N 103 UIX C39 H55 SING N N 104 UIX C41 H56 SING N N 105 UIX C41 H57 SING N N 106 UIX C41 H58 SING N N 107 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UIX InChI InChI 1.06 "InChI=1S/C42H58O5/c1-30(18-14-20-32(3)22-23-37-38(6,7)28-36(46-34(5)43)29-40(37,10)45)16-12-13-17-31(2)19-15-21-33(4)24-25-42-39(8,9)26-35(44)27-41(42,11)47-42/h12-22,24-25,35-36,44-45H,26-29H2,1-11H3/b13-12+,18-14+,19-15+,25-24+,30-16+,31-17+,32-20+,33-21+/t23-,35-,36-,40+,41+,42-/m0/s1" UIX InChIKey InChI 1.06 PVNVIBOWBAPFOE-GYMZYDTCSA-N UIX SMILES_CANONICAL CACTVS 3.385 "CC(=O)O[C@H]1CC(C)(C)[C](=[C@@]=[CH]\C(C)=C\C=C\C(C)=C\C=C\C=C(C)\C=C\C=C(C)\C=C\[C@@]23O[C@]2(C)C[C@@H](O)CC3(C)C)[C@](C)(O)C1" UIX SMILES CACTVS 3.385 "CC(=O)O[CH]1CC(C)(C)[C](=[C]=[CH]C(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=C[C]23O[C]2(C)C[CH](O)CC3(C)C)[C](C)(O)C1" UIX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C/C(=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C=C1[C@](C[C@H](CC1(C)C)OC(=O)C)(C)O)/C=C/C=C(\C)/C=C/[C@]23[C@](O2)(C[C@H](CC3(C)C)O)C" UIX SMILES "OpenEye OEToolkits" 2.0.7 "CC(=CC=CC=C(C)C=CC=C(C)C=C=C1C(CC(CC1(C)O)OC(=O)C)(C)C)C=CC=C(C)C=CC23C(CC(CC2(O3)C)O)(C)C" # _pdbx_chem_comp_identifier.comp_id UIX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(1~{S},5~{R})-3,3,5-trimethyl-5-oxidanyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{S},4~{S},6~{R})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]cyclohexyl] ethanoate" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id UIX _pdbx_chem_comp_synonyms.name Dinoxanthin _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UIX "Create component" 2023-06-06 PDBJ UIX "Initial release" 2024-02-28 RCSB #