data_UJB # _chem_comp.id UJB _chem_comp.name "(2S)-1-[(5-chloro-2-thienyl)methyl]-8-[(3R,5R)-3,5-dimethylmorpholin-4-yl]-2-(trifluoromethyl)-3,4-dihydro-2H-pyrimido[1,2-a]pyrimidin-6-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H22 Cl F3 N4 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-08-12 _chem_comp.pdbx_modified_date 2014-11-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 462.917 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UJB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4UWK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UJB C1 C1 C 0 1 N N S 20.673 -18.338 -25.476 3.159 0.431 -0.397 C1 UJB 1 UJB C2 C2 C 0 1 N N N 18.802 -17.055 -24.442 0.824 1.213 -0.263 C2 UJB 2 UJB N3 N3 N 0 1 N N N 18.045 -18.213 -24.392 1.120 2.329 -0.981 N3 UJB 3 UJB N4 N4 N 0 1 N N N 20.222 -17.136 -24.756 1.812 0.362 0.151 N4 UJB 4 UJB N5 N5 N 0 1 N N N 18.281 -15.837 -24.150 -0.422 0.933 0.077 N5 UJB 5 UJB C6 C6 C 0 1 N N N 16.650 -18.122 -24.068 0.143 3.223 -1.265 C6 UJB 6 UJB C7 C7 C 0 1 N N N 18.576 -19.555 -24.755 2.460 2.584 -1.498 C7 UJB 7 UJB C8 C8 C 0 1 N N N 16.936 -15.682 -23.689 -1.432 1.755 -0.221 C8 UJB 8 UJB C9 C9 C 0 1 N N N 16.129 -16.823 -23.697 -1.172 2.941 -0.892 C9 UJB 9 UJB O10 O10 O 0 1 N N N 16.033 -19.172 -24.122 0.411 4.266 -1.840 O10 UJB 10 UJB C11 C11 C 0 1 N N N 20.101 -19.629 -24.865 3.543 1.866 -0.718 C11 UJB 11 UJB C12 C12 C 0 1 N N R 15.087 -14.059 -23.648 -3.313 1.923 1.391 C12 UJB 12 UJB C13 C13 C 0 1 N N N 14.677 -12.903 -22.771 -3.914 0.734 2.147 C13 UJB 13 UJB O14 O14 O 0 1 N N N 15.555 -11.783 -22.919 -4.791 0.016 1.275 O14 UJB 14 UJB C15 C15 C 0 1 N N N 16.897 -12.077 -22.494 -4.144 -0.554 0.135 C15 UJB 15 UJB C16 C16 C 0 1 N N R 17.478 -13.401 -22.979 -3.554 0.570 -0.725 C16 UJB 16 UJB N17 N17 N 0 1 N N N 16.510 -14.457 -23.418 -2.724 1.427 0.137 N17 UJB 17 UJB C18 C18 C 0 1 N N N 20.451 -18.200 -26.970 4.147 -0.138 0.623 C18 UJB 18 UJB F19 F19 F 0 1 N N N 19.236 -17.765 -27.281 3.911 -1.507 0.789 F19 UJB 19 UJB F20 F20 F 0 1 N N N 20.621 -19.354 -27.608 5.455 0.058 0.166 F20 UJB 20 UJB F21 F21 F 0 1 N N N 21.306 -17.337 -27.503 3.979 0.516 1.849 F21 UJB 21 UJB S22 S22 S 0 1 Y N N 22.145 -15.198 -21.822 -0.808 -2.033 0.110 S22 UJB 22 UJB C23 C23 C 0 1 Y N N 21.461 -15.651 -23.279 0.894 -1.855 0.516 C23 UJB 23 UJB C24 C24 C 0 1 Y N N 21.341 -14.652 -24.183 1.558 -2.954 0.157 C24 UJB 24 UJB C25 C25 C 0 1 Y N N 21.815 -13.425 -23.677 0.782 -3.939 -0.430 C25 UJB 25 UJB C26 C26 C 0 1 Y N N 22.295 -13.570 -22.421 -0.514 -3.639 -0.546 C26 UJB 26 UJB CL CL CL 0 0 N N N 22.949 -12.277 -21.571 -1.723 -4.674 -1.238 CL UJB 27 UJB C28 C28 C 0 1 N N N 21.036 -16.991 -23.506 1.507 -0.644 1.172 C28 UJB 28 UJB C29 C29 C 0 1 N N N 14.764 -13.819 -25.117 -2.227 2.581 2.245 C29 UJB 29 UJB C30 C30 C 0 1 N N N 18.445 -13.868 -21.906 -4.686 1.398 -1.338 C30 UJB 30 UJB H1 H1 H 0 1 N N N 21.762 -18.397 -25.335 3.205 -0.165 -1.309 H1 UJB 31 UJB H111 H111 H 0 0 N N N 20.375 -20.481 -25.504 3.723 2.401 0.214 H111 UJB 32 UJB H112 H112 H 0 0 N N N 20.528 -19.772 -23.861 4.461 1.864 -1.306 H112 UJB 33 UJB H71C H71C H 0 0 N N N 18.252 -20.272 -23.986 2.503 2.259 -2.537 H71C UJB 34 UJB H72C H72C H 0 0 N N N 18.148 -19.842 -25.727 2.653 3.656 -1.460 H72C UJB 35 UJB H281 H281 H 0 0 N N N 20.427 -17.317 -22.650 2.426 -0.934 1.682 H281 UJB 36 UJB H282 H282 H 0 0 N N N 21.925 -17.633 -23.589 0.806 -0.228 1.895 H282 UJB 37 UJB H9 H9 H 0 1 N N N 15.089 -16.733 -23.419 -1.971 3.632 -1.121 H9 UJB 38 UJB H12 H12 H 0 1 N N N 14.471 -14.915 -23.336 -4.095 2.649 1.167 H12 UJB 39 UJB H131 H131 H 0 0 N N N 13.657 -12.594 -23.044 -3.114 0.074 2.483 H131 UJB 40 UJB H132 H132 H 0 0 N N N 14.692 -13.230 -21.721 -4.475 1.096 3.009 H132 UJB 41 UJB H291 H291 H 0 0 N N N 15.082 -14.689 -25.710 -1.485 1.834 2.528 H291 UJB 42 UJB H292 H292 H 0 0 N N N 13.680 -13.672 -25.235 -1.744 3.373 1.672 H292 UJB 43 UJB H293 H293 H 0 0 N N N 15.296 -12.922 -25.467 -2.677 3.005 3.142 H293 UJB 44 UJB H151 H151 H 0 0 N N N 17.550 -11.270 -22.858 -3.345 -1.218 0.463 H151 UJB 45 UJB H152 H152 H 0 0 N N N 16.907 -12.088 -21.394 -4.869 -1.118 -0.451 H152 UJB 46 UJB H16 H16 H 0 1 N N N 18.092 -13.159 -23.859 -2.940 0.142 -1.518 H16 UJB 47 UJB H301 H301 H 0 0 N N N 18.895 -14.825 -22.208 -5.291 1.831 -0.542 H301 UJB 48 UJB H302 H302 H 0 0 N N N 19.237 -13.116 -21.774 -4.262 2.196 -1.948 H302 UJB 49 UJB H303 H303 H 0 0 N N N 17.904 -14.001 -20.958 -5.309 0.756 -1.960 H303 UJB 50 UJB H24 H24 H 0 1 N N N 20.931 -14.779 -25.174 2.621 -3.066 0.311 H24 UJB 51 UJB H25 H25 H 0 1 N N N 21.797 -12.492 -24.221 1.193 -4.878 -0.768 H25 UJB 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UJB C1 N4 SING N N 1 UJB C1 C11 SING N N 2 UJB C1 C18 SING N N 3 UJB C2 N3 SING N N 4 UJB C2 N4 SING N N 5 UJB C2 N5 DOUB N N 6 UJB N3 C6 SING N N 7 UJB N3 C7 SING N N 8 UJB N4 C28 SING N N 9 UJB N5 C8 SING N N 10 UJB C6 C9 SING N N 11 UJB C6 O10 DOUB N N 12 UJB C7 C11 SING N N 13 UJB C8 C9 DOUB N N 14 UJB C8 N17 SING N N 15 UJB C12 C13 SING N N 16 UJB C12 N17 SING N N 17 UJB C12 C29 SING N N 18 UJB C13 O14 SING N N 19 UJB O14 C15 SING N N 20 UJB C15 C16 SING N N 21 UJB C16 N17 SING N N 22 UJB C16 C30 SING N N 23 UJB C18 F19 SING N N 24 UJB C18 F20 SING N N 25 UJB C18 F21 SING N N 26 UJB S22 C23 SING Y N 27 UJB S22 C26 SING Y N 28 UJB C23 C24 DOUB Y N 29 UJB C23 C28 SING N N 30 UJB C24 C25 SING Y N 31 UJB C25 C26 DOUB Y N 32 UJB C26 CL SING N N 33 UJB C1 H1 SING N N 34 UJB C11 H111 SING N N 35 UJB C11 H112 SING N N 36 UJB C7 H71C SING N N 37 UJB C7 H72C SING N N 38 UJB C28 H281 SING N N 39 UJB C28 H282 SING N N 40 UJB C9 H9 SING N N 41 UJB C12 H12 SING N N 42 UJB C13 H131 SING N N 43 UJB C13 H132 SING N N 44 UJB C29 H291 SING N N 45 UJB C29 H292 SING N N 46 UJB C29 H293 SING N N 47 UJB C15 H151 SING N N 48 UJB C15 H152 SING N N 49 UJB C16 H16 SING N N 50 UJB C30 H301 SING N N 51 UJB C30 H302 SING N N 52 UJB C30 H303 SING N N 53 UJB C24 H24 SING N N 54 UJB C25 H25 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UJB SMILES ACDLabs 12.01 "Clc1sc(cc1)CN4C3=NC(N2C(C)COCC2C)=CC(=O)N3CCC4C(F)(F)F" UJB InChI InChI 1.03 "InChI=1S/C19H22ClF3N4O2S/c1-11-9-29-10-12(2)27(11)16-7-17(28)25-6-5-14(19(21,22)23)26(18(25)24-16)8-13-3-4-15(20)30-13/h3-4,7,11-12,14H,5-6,8-10H2,1-2H3/t11-,12-,14+/m1/s1" UJB InChIKey InChI 1.03 MMAAITOCOBQYBQ-BZPMIXESSA-N UJB SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1COC[C@@H](C)N1C2=CC(=O)N3CC[C@H](N(Cc4sc(Cl)cc4)C3=N2)C(F)(F)F" UJB SMILES CACTVS 3.385 "C[CH]1COC[CH](C)N1C2=CC(=O)N3CC[CH](N(Cc4sc(Cl)cc4)C3=N2)C(F)(F)F" UJB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H]1COC[C@H](N1C2=CC(=O)N3CC[C@H](N(C3=N2)Cc4ccc(s4)Cl)C(F)(F)F)C" UJB SMILES "OpenEye OEToolkits" 1.7.6 "CC1COCC(N1C2=CC(=O)N3CCC(N(C3=N2)Cc4ccc(s4)Cl)C(F)(F)F)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UJB "SYSTEMATIC NAME" ACDLabs 12.01 "(8S)-9-[(5-chlorothiophen-2-yl)methyl]-2-[(3R,5R)-3,5-dimethylmorpholin-4-yl]-8-(trifluoromethyl)-6,7,8,9-tetrahydro-4H-pyrimido[1,2-a]pyrimidin-4-one" UJB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(8S)-9-[(5-chloranylthiophen-2-yl)methyl]-2-[(3R,5R)-3,5-dimethylmorpholin-4-yl]-8-(trifluoromethyl)-7,8-dihydro-6H-pyrimido[1,2-a]pyrimidin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UJB "Create component" 2014-08-12 EBI UJB "Initial release" 2014-11-26 RCSB #