data_UJE # _chem_comp.id UJE _chem_comp.name "5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-N-((S)-pyrrolidin-3-yl)pentanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H24 N4 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[(3~{S})-pyrrolidin-3-yl]pentanamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-23 _chem_comp.pdbx_modified_date 2021-08-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 312.431 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UJE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7NLV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UJE O1 O1 O 0 1 N N N -6.526 9.162 25.388 -3.096 -1.214 0.801 O1 UJE 1 UJE O2 O2 O 0 1 N N N -2.971 14.684 18.642 4.961 -2.752 -0.740 O2 UJE 2 UJE C1 C1 C 0 1 N N N -5.424 9.131 25.933 -3.212 -0.041 0.514 C1 UJE 3 UJE C2 C2 C 0 1 N N N -4.600 10.392 26.069 -1.989 0.832 0.403 C2 UJE 4 UJE C3 C3 C 0 1 N N N -4.708 11.281 24.862 -0.739 -0.000 0.697 C3 UJE 5 UJE C4 C4 C 0 1 N N N -4.057 10.684 23.626 0.502 0.886 0.583 C4 UJE 6 UJE C5 C5 C 0 1 N N N -4.273 11.480 22.337 1.752 0.054 0.877 C5 UJE 7 UJE C6 C6 C 0 1 N N S -3.619 10.870 21.094 2.994 0.941 0.764 C6 UJE 8 UJE S1 S1 S 0 1 N N N -1.804 11.039 21.151 3.244 1.493 -0.972 S1 UJE 9 UJE C7 C7 C 0 1 N N N -1.785 10.443 19.446 5.065 1.693 -0.810 C7 UJE 10 UJE C8 C8 C 0 1 N N R -2.922 11.160 18.705 5.446 0.555 0.158 C8 UJE 11 UJE N1 N1 N 0 1 N N N -2.533 12.459 18.230 5.761 -0.655 -0.618 N1 UJE 12 UJE C9 C9 C 0 1 N N N -3.133 13.466 18.890 4.924 -1.637 -0.256 C9 UJE 13 UJE N2 N2 N 0 1 N N N -4.041 12.927 19.730 4.043 -1.279 0.688 N2 UJE 14 UJE C10 C10 C 0 1 N N S -4.031 11.483 19.735 4.273 0.129 1.049 C10 UJE 15 UJE N3 N3 N 0 1 N N N -4.918 7.994 26.432 -4.435 0.480 0.290 N3 UJE 16 UJE C11 C11 C 0 1 N N S -5.728 6.802 26.569 -5.623 -0.371 0.393 C11 UJE 17 UJE C12 C12 C 0 1 N N N -5.209 5.628 25.779 -6.880 0.492 0.649 C12 UJE 18 UJE C13 C13 C 0 1 N N N -5.977 4.483 26.382 -7.481 0.659 -0.769 C13 UJE 19 UJE N4 N4 N 0 1 N N N -6.285 4.878 27.761 -7.234 -0.663 -1.400 N4 UJE 20 UJE C14 C14 C 0 1 N N N -5.772 6.241 27.983 -5.890 -1.081 -0.947 C14 UJE 21 UJE H1 H1 H 0 1 N N N -3.545 10.111 26.208 -1.925 1.240 -0.606 H1 UJE 22 UJE H2 H2 H 0 1 N N N -4.950 10.949 26.950 -2.059 1.649 1.121 H2 UJE 23 UJE H3 H3 H 0 1 N N N -4.218 12.240 25.088 -0.804 -0.408 1.706 H3 UJE 24 UJE H4 H4 H 0 1 N N N -5.773 11.454 24.648 -0.669 -0.817 -0.022 H4 UJE 25 UJE H5 H5 H 0 1 N N N -4.468 9.674 23.477 0.567 1.294 -0.426 H5 UJE 26 UJE H6 H6 H 0 1 N N N -2.974 10.616 23.809 0.433 1.703 1.302 H6 UJE 27 UJE H7 H7 H 0 1 N N N -3.858 12.488 22.483 1.688 -0.354 1.886 H7 UJE 28 UJE H8 H8 H 0 1 N N N -5.356 11.551 22.155 1.822 -0.763 0.159 H8 UJE 29 UJE H9 H9 H 0 1 N N N -3.822 9.789 21.074 2.918 1.796 1.435 H9 UJE 30 UJE H10 H10 H 0 1 N N N -1.948 9.355 19.425 5.556 1.560 -1.774 H10 UJE 31 UJE H11 H11 H 0 1 N N N -0.820 10.679 18.975 5.311 2.665 -0.383 H11 UJE 32 UJE H12 H12 H 0 1 N N N -3.319 10.526 17.899 6.298 0.850 0.770 H12 UJE 33 UJE H13 H13 H 0 1 N N N -1.882 12.600 17.484 6.462 -0.730 -1.284 H13 UJE 34 UJE H14 H14 H 0 1 N N N -4.660 13.474 20.294 3.364 -1.855 1.071 H14 UJE 35 UJE H15 H15 H 0 1 N N N -4.993 11.066 19.404 4.549 0.208 2.100 H15 UJE 36 UJE H16 H16 H 0 1 N N N -3.959 7.969 26.716 -4.528 1.418 0.061 H16 UJE 37 UJE H17 H17 H 0 1 N N N -6.757 7.018 26.246 -5.496 -1.103 1.191 H17 UJE 38 UJE H18 H18 H 0 1 N N N -4.125 5.500 25.918 -7.578 -0.028 1.305 H18 UJE 39 UJE H19 H19 H 0 1 N N N -5.431 5.738 24.707 -6.604 1.461 1.067 H19 UJE 40 UJE H20 H20 H 0 1 N N N -6.906 4.308 25.819 -8.550 0.864 -0.712 H20 UJE 41 UJE H21 H21 H 0 1 N N N -5.366 3.568 26.375 -6.965 1.448 -1.316 H21 UJE 42 UJE H22 H22 H 0 1 N N N -7.275 4.863 27.903 -7.934 -1.334 -1.121 H22 UJE 43 UJE H24 H24 H 0 1 N N N -4.770 6.221 28.436 -5.141 -0.783 -1.681 H24 UJE 44 UJE H25 H25 H 0 1 N N N -6.451 6.824 28.622 -5.865 -2.162 -0.806 H25 UJE 45 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UJE N1 C8 SING N N 1 UJE N1 C9 SING N N 2 UJE O2 C9 DOUB N N 3 UJE C8 C7 SING N N 4 UJE C8 C10 SING N N 5 UJE C9 N2 SING N N 6 UJE C7 S1 SING N N 7 UJE N2 C10 SING N N 8 UJE C10 C6 SING N N 9 UJE C6 S1 SING N N 10 UJE C6 C5 SING N N 11 UJE C5 C4 SING N N 12 UJE C4 C3 SING N N 13 UJE C3 C2 SING N N 14 UJE O1 C1 DOUB N N 15 UJE C12 C13 SING N N 16 UJE C12 C11 SING N N 17 UJE C1 C2 SING N N 18 UJE C1 N3 SING N N 19 UJE C13 N4 SING N N 20 UJE N3 C11 SING N N 21 UJE C11 C14 SING N N 22 UJE N4 C14 SING N N 23 UJE C2 H1 SING N N 24 UJE C2 H2 SING N N 25 UJE C3 H3 SING N N 26 UJE C3 H4 SING N N 27 UJE C4 H5 SING N N 28 UJE C4 H6 SING N N 29 UJE C5 H7 SING N N 30 UJE C5 H8 SING N N 31 UJE C6 H9 SING N N 32 UJE C7 H10 SING N N 33 UJE C7 H11 SING N N 34 UJE C8 H12 SING N N 35 UJE N1 H13 SING N N 36 UJE N2 H14 SING N N 37 UJE C10 H15 SING N N 38 UJE N3 H16 SING N N 39 UJE C11 H17 SING N N 40 UJE C12 H18 SING N N 41 UJE C12 H19 SING N N 42 UJE C13 H20 SING N N 43 UJE C13 H21 SING N N 44 UJE N4 H22 SING N N 45 UJE C14 H24 SING N N 46 UJE C14 H25 SING N N 47 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UJE InChI InChI 1.03 "InChI=1S/C14H24N4O2S/c19-12(16-9-5-6-15-7-9)4-2-1-3-11-13-10(8-21-11)17-14(20)18-13/h9-11,13,15H,1-8H2,(H,16,19)(H2,17,18,20)/t9-,10-,11-,13-/m0/s1" UJE InChIKey InChI 1.03 QSMYOZNFIUDGEL-ZPFDUUQYSA-N UJE SMILES_CANONICAL CACTVS 3.385 "O=C(CCCC[C@@H]1SC[C@@H]2NC(=O)N[C@H]12)N[C@H]3CCNC3" UJE SMILES CACTVS 3.385 "O=C(CCCC[CH]1SC[CH]2NC(=O)N[CH]12)N[CH]3CCNC3" UJE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1CNC[C@H]1NC(=O)CCCC[C@H]2[C@@H]3[C@H](CS2)NC(=O)N3" UJE SMILES "OpenEye OEToolkits" 2.0.7 "C1CNCC1NC(=O)CCCCC2C3C(CS2)NC(=O)N3" # _pdbx_chem_comp_identifier.comp_id UJE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[(3~{S})-pyrrolidin-3-yl]pentanamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id UJE _pdbx_chem_comp_synonyms.name "5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[(3~{S})-pyrrolidin-3-yl]pentanamide" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UJE "Create component" 2021-02-23 PDBE UJE "Initial release" 2021-08-18 RCSB ##