data_UJN # _chem_comp.id UJN _chem_comp.name "[oxidanyl-[(2S,3R,5S,6S)-4-phenylmethoxy-2,3,5,6-tetraphosphonooxy-cyclohexyl]oxy-phosphoryl]methylphosphonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H26 O23 P6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[oxidanyl-[(2~{S},3~{R},5~{S},6~{S})-4-phenylmethoxy-2,3,5,6-tetraphosphonooxy-cyclohexyl]oxy-phosphoryl]methylphosphonic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-25 _chem_comp.pdbx_modified_date 2022-03-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 748.185 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UJN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7NNJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UJN C4 C1 C 0 1 N N R 20.371 -15.388 12.580 1.217 -1.243 -0.370 C4 UJN 1 UJN C5 C2 C 0 1 N N N 19.917 -16.607 13.386 1.860 -0.007 0.263 C5 UJN 2 UJN C6 C3 C 0 1 N N N 20.209 -17.257 15.687 4.179 -0.424 0.703 C6 UJN 3 UJN C7 C4 C 0 1 Y N N 20.385 -16.695 17.076 5.562 -0.126 0.186 C7 UJN 4 UJN C8 C5 C 0 1 Y N N 19.378 -16.791 18.019 6.152 -0.970 -0.737 C8 UJN 5 UJN C10 C6 C 0 1 Y N N 20.730 -15.668 19.646 8.101 0.421 -0.764 C10 UJN 6 UJN C13 C7 C 0 1 N N S 18.590 -17.104 12.826 1.069 1.240 -0.136 C13 UJN 7 UJN P1 P1 P 0 1 N N N 18.937 -16.182 7.869 -3.633 -0.234 -0.813 P1 UJN 8 UJN P2 P2 P 0 1 N N N 16.169 -16.297 6.571 -6.589 -0.544 -0.984 P2 UJN 9 UJN P3 P3 P 0 1 N N N 23.053 -16.515 10.461 -0.846 -2.794 2.298 P3 UJN 10 UJN P4 P4 P 0 1 N N N 21.944 -13.415 13.403 2.664 -3.378 -1.070 P4 UJN 11 UJN P5 P5 P 0 1 N N N 16.846 -18.309 14.437 2.332 3.579 -0.411 P5 UJN 12 UJN P6 P6 P 0 1 N N N 17.178 -19.453 10.470 -1.822 3.242 1.054 P6 UJN 13 UJN C1 C8 C 0 1 N N N 17.313 -16.992 7.780 -5.153 -0.564 0.139 C1 UJN 14 UJN O1 O1 O 0 1 N N N 19.743 -16.638 6.692 -3.464 -1.276 -1.849 O1 UJN 15 UJN C2 C9 C 0 1 N N N 19.227 -16.280 10.539 -1.017 -0.128 -0.279 C2 UJN 16 UJN O2 O2 O 0 1 N N N 14.928 -17.166 6.558 -7.931 -0.836 -0.144 O2 UJN 17 UJN C3 C10 C 0 1 N N S 20.517 -15.717 11.103 -0.226 -1.375 0.120 C3 UJN 18 UJN O3 O3 O 0 1 N N N 15.904 -14.903 7.105 -6.700 0.900 -1.688 O3 UJN 19 UJN O4 O4 O 0 1 N N N 16.866 -16.279 5.229 -6.419 -1.587 -2.021 O4 UJN 20 UJN O5 O5 O 0 1 N N N 18.778 -14.699 8.005 -3.744 1.210 -1.516 O5 UJN 21 UJN O6 O6 O 0 1 N N N 19.547 -16.777 9.199 -2.365 -0.251 0.179 O6 UJN 22 UJN O7 O7 O 0 1 N N N 21.528 -16.768 10.945 -0.235 -1.510 1.543 O7 UJN 23 UJN O8 O8 O 0 1 N N N 23.867 -16.255 11.717 -0.807 -2.550 3.889 O8 UJN 24 UJN C9 C11 C 0 1 Y N N 19.548 -16.275 19.298 7.421 -0.697 -1.212 C9 UJN 25 UJN O9 O9 O 0 1 N N N 23.015 -15.306 9.544 -2.246 -3.002 1.865 O9 UJN 26 UJN O10 O10 O 0 1 N N N 23.497 -17.769 9.731 0.028 -4.096 1.934 O10 UJN 27 UJN C11 C12 C 0 1 Y N N 21.744 -15.573 18.722 7.509 1.267 0.155 C11 UJN 28 UJN O11 O11 O 0 1 N N N 21.671 -14.964 13.092 1.955 -2.408 0.003 O11 UJN 29 UJN C12 C13 C 0 1 Y N N 21.576 -16.084 17.445 6.240 0.994 0.630 C12 UJN 30 UJN O12 O12 O 0 1 N N N 21.818 -12.671 12.086 3.572 -2.584 -1.928 O12 UJN 31 UJN O13 O13 O 0 1 N N N 20.890 -12.991 14.414 3.510 -4.507 -0.295 O13 UJN 32 UJN C14 C14 C 0 1 N N S 18.750 -17.467 11.358 -0.374 1.108 0.354 C14 UJN 33 UJN O14 O14 O 0 1 N N N 23.347 -13.366 13.973 1.540 -4.081 -1.983 O14 UJN 34 UJN O15 O15 O 0 1 N N N 19.795 -16.243 14.764 3.207 0.116 -0.195 O15 UJN 35 UJN O16 O16 O 0 1 N N N 18.193 -18.307 13.558 1.669 2.394 0.455 O16 UJN 36 UJN O17 O17 O 0 1 N N N 15.673 -18.190 13.477 1.338 4.099 -1.376 O17 UJN 37 UJN O18 O18 O 0 1 N N N 16.820 -19.610 15.213 2.797 4.766 0.572 O18 UJN 38 UJN O19 O19 O 0 1 N N N 16.981 -17.096 15.338 3.609 3.011 -1.208 O19 UJN 39 UJN O20 O20 O 0 1 N N N 17.457 -17.907 10.832 -1.113 2.273 -0.019 O20 UJN 40 UJN O21 O21 O 0 1 N N N 17.435 -20.257 11.731 -2.447 4.517 0.294 O21 UJN 41 UJN O22 O22 O 0 1 N N N 15.730 -19.537 10.021 -2.995 2.439 1.809 O22 UJN 42 UJN O23 O23 O 0 1 N N N 18.154 -19.801 9.358 -0.821 3.700 2.043 O23 UJN 43 UJN H1 H1 H 0 1 N N N 19.635 -14.580 12.701 1.224 -1.140 -1.456 H1 UJN 44 UJN H2 H2 H 0 1 N N N 20.668 -17.403 13.273 1.853 -0.110 1.348 H2 UJN 45 UJN H3 H3 H 0 1 N N N 19.446 -18.049 15.715 4.043 -1.503 0.778 H3 UJN 46 UJN H4 H4 H 0 1 N N N 21.166 -17.681 15.348 4.054 0.027 1.688 H4 UJN 47 UJN H5 H5 H 0 1 N N N 18.448 -17.273 17.758 5.621 -1.843 -1.087 H5 UJN 48 UJN H6 H6 H 0 1 N N N 20.862 -15.267 20.640 9.092 0.634 -1.134 H6 UJN 49 UJN H7 H7 H 0 1 N N N 17.827 -16.319 12.932 1.076 1.343 -1.222 H7 UJN 50 UJN H8 H8 H 0 1 N N N 16.843 -16.921 8.772 -5.078 -1.542 0.615 H8 UJN 51 UJN H9 H9 H 0 1 N N N 17.475 -18.050 7.526 -5.278 0.203 0.902 H9 UJN 52 UJN H10 H10 H 0 1 N N N 18.451 -15.502 10.501 -1.010 -0.025 -1.364 H10 UJN 53 UJN H11 H11 H 0 1 N N N 14.815 -17.545 5.694 -8.737 -0.841 -0.679 H11 UJN 54 UJN H12 H12 H 0 1 N N N 20.807 -14.814 10.546 -0.684 -2.256 -0.331 H12 UJN 55 UJN H13 H13 H 0 1 N N N 16.230 -14.259 6.487 -6.813 1.632 -1.067 H13 UJN 56 UJN H14 H14 H 0 1 N N N 19.233 -14.265 7.293 -3.857 1.943 -0.895 H14 UJN 57 UJN H15 H15 H 0 1 N N N 24.208 -15.368 11.696 -1.160 -3.285 4.409 H15 UJN 58 UJN H16 H16 H 0 1 N N N 18.749 -16.351 20.020 7.882 -1.356 -1.932 H16 UJN 59 UJN H17 H17 H 0 1 N N N 23.672 -17.561 8.821 0.958 -4.030 2.190 H17 UJN 60 UJN H18 H18 H 0 1 N N N 22.675 -15.098 18.993 8.039 2.142 0.503 H18 UJN 61 UJN H19 H19 H 0 1 N N N 22.380 -16.006 16.729 5.777 1.656 1.347 H19 UJN 62 UJN H20 H20 H 0 1 N N N 20.333 -12.324 14.030 3.966 -5.128 -0.880 H20 UJN 63 UJN H21 H21 H 0 1 N N N 19.484 -18.281 11.269 -0.381 1.005 1.439 H21 UJN 64 UJN H22 H22 H 0 1 N N N 23.908 -12.867 13.391 0.909 -4.619 -1.485 H22 UJN 65 UJN H23 H23 H 0 1 N N N 16.062 -20.120 14.952 3.206 5.516 0.118 H23 UJN 66 UJN H24 H24 H 0 1 N N N 16.295 -16.471 15.134 4.269 2.586 -0.643 H24 UJN 67 UJN H25 H25 H 0 1 N N N 18.172 -20.840 11.591 -2.891 5.145 0.880 H25 UJN 68 UJN H26 H26 H 0 1 N N N 15.696 -19.797 9.108 -3.688 2.109 1.221 H26 UJN 69 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UJN O4 P2 DOUB N N 1 UJN O2 P2 SING N N 2 UJN P2 O3 SING N N 3 UJN P2 C1 SING N N 4 UJN O1 P1 DOUB N N 5 UJN C1 P1 SING N N 6 UJN P1 O5 SING N N 7 UJN P1 O6 SING N N 8 UJN O6 C2 SING N N 9 UJN O23 P6 DOUB N N 10 UJN O9 P3 DOUB N N 11 UJN O10 P3 SING N N 12 UJN O22 P6 SING N N 13 UJN P3 O7 SING N N 14 UJN P3 O8 SING N N 15 UJN P6 O20 SING N N 16 UJN P6 O21 SING N N 17 UJN C2 C3 SING N N 18 UJN C2 C14 SING N N 19 UJN O20 C14 SING N N 20 UJN O7 C3 SING N N 21 UJN C3 C4 SING N N 22 UJN C14 C13 SING N N 23 UJN O12 P4 DOUB N N 24 UJN C4 O11 SING N N 25 UJN C4 C5 SING N N 26 UJN C13 C5 SING N N 27 UJN C13 O16 SING N N 28 UJN O11 P4 SING N N 29 UJN C5 O15 SING N N 30 UJN P4 O14 SING N N 31 UJN P4 O13 SING N N 32 UJN O17 P5 DOUB N N 33 UJN O16 P5 SING N N 34 UJN P5 O18 SING N N 35 UJN P5 O19 SING N N 36 UJN O15 C6 SING N N 37 UJN C6 C7 SING N N 38 UJN C7 C12 DOUB Y N 39 UJN C7 C8 SING Y N 40 UJN C12 C11 SING Y N 41 UJN C8 C9 DOUB Y N 42 UJN C11 C10 DOUB Y N 43 UJN C9 C10 SING Y N 44 UJN C4 H1 SING N N 45 UJN C5 H2 SING N N 46 UJN C6 H3 SING N N 47 UJN C6 H4 SING N N 48 UJN C8 H5 SING N N 49 UJN C10 H6 SING N N 50 UJN C13 H7 SING N N 51 UJN C1 H8 SING N N 52 UJN C1 H9 SING N N 53 UJN C2 H10 SING N N 54 UJN O2 H11 SING N N 55 UJN C3 H12 SING N N 56 UJN O3 H13 SING N N 57 UJN O5 H14 SING N N 58 UJN O8 H15 SING N N 59 UJN C9 H16 SING N N 60 UJN O10 H17 SING N N 61 UJN C11 H18 SING N N 62 UJN C12 H19 SING N N 63 UJN O13 H20 SING N N 64 UJN C14 H21 SING N N 65 UJN O14 H22 SING N N 66 UJN O18 H23 SING N N 67 UJN O19 H24 SING N N 68 UJN O21 H25 SING N N 69 UJN O22 H26 SING N N 70 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UJN InChI InChI 1.03 "InChI=1S/C14H26O23P6/c15-38(16,17)7-39(18,19)33-12-13(36-42(26,27)28)10(34-40(20,21)22)9(32-6-8-4-2-1-3-5-8)11(35-41(23,24)25)14(12)37-43(29,30)31/h1-5,9-14H,6-7H2,(H,18,19)(H2,15,16,17)(H2,20,21,22)(H2,23,24,25)(H2,26,27,28)(H2,29,30,31)/t9-,10-,11+,12-,13-,14-/m1/s1" UJN InChIKey InChI 1.03 WTIJGFYHWWTXHU-BUCHIQEDSA-N UJN SMILES_CANONICAL CACTVS 3.385 "O[P](O)(=O)C[P](O)(=O)O[C@@H]1[C@H](O[P](O)(O)=O)[C@H](O[P](O)(O)=O)[C@@H](OCc2ccccc2)[C@H](O[P](O)(O)=O)[C@H]1O[P](O)(O)=O" UJN SMILES CACTVS 3.385 "O[P](O)(=O)C[P](O)(=O)O[CH]1[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH](OCc2ccccc2)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O" UJN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)COC2[C@@H]([C@H](C([C@@H]([C@@H]2OP(=O)(O)O)OP(=O)(O)O)OP(=O)(CP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O" UJN SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)COC2C(C(C(C(C2OP(=O)(O)O)OP(=O)(O)O)OP(=O)(CP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O" # _pdbx_chem_comp_identifier.comp_id UJN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[oxidanyl-[(2~{S},3~{R},5~{S},6~{S})-4-phenylmethoxy-2,3,5,6-tetraphosphonooxy-cyclohexyl]oxy-phosphoryl]methylphosphonic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id UJN _pdbx_chem_comp_synonyms.name "[oxidanyl-[(2~{S},3~{R},5~{S},6~{S})-4-phenylmethoxy-2,3,5,6-tetraphosphonooxy-cyclohexyl]oxy-phosphoryl]methylphosphonic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UJN "Create component" 2021-02-25 PDBE UJN "Initial release" 2022-03-23 RCSB ##