data_UK4 # _chem_comp.id UK4 _chem_comp.name "2-[(4-{6-[(4-cyano-2-fluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-{[(2S)-oxetan-2-yl]methyl}-1H-benzimidazole-6-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H30 F N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-19 _chem_comp.pdbx_modified_date 2020-09-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 555.599 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UK4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6X1A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UK4 C29 C1 C 0 1 N N N 126.773 119.520 154.041 -6.578 4.039 -1.711 C29 UK4 1 UK4 C28 C2 C 0 1 N N N 126.568 118.307 154.805 -5.429 4.314 -0.734 C28 UK4 2 UK4 C27 C3 C 0 1 N N S 127.962 118.255 155.089 -5.276 2.792 -0.852 C27 UK4 3 UK4 C26 C4 C 0 1 N N N 128.610 116.987 154.663 -4.914 2.114 0.471 C26 UK4 4 UK4 C20 C5 C 0 1 N N N 124.528 114.038 152.233 -9.095 -1.624 0.807 C20 UK4 5 UK4 C13 C6 C 0 1 N N N 130.729 118.181 152.764 -2.181 0.855 -0.234 C13 UK4 6 UK4 C11 C7 C 0 1 N N N 131.772 115.970 152.982 -0.343 1.835 0.999 C11 UK4 7 UK4 C10 C8 C 0 1 N N N 133.073 115.245 153.327 0.674 1.309 -0.016 C10 UK4 8 UK4 C14 C9 C 0 1 Y N N 129.516 117.328 152.378 -3.482 0.112 -0.072 C14 UK4 9 UK4 C16 C10 C 0 1 Y N N 128.072 116.257 151.178 -4.923 -1.514 0.006 C16 UK4 10 UK4 C17 C11 C 0 1 Y N N 127.299 115.643 150.182 -5.615 -2.731 -0.014 C17 UK4 11 UK4 C18 C12 C 0 1 Y N N 126.160 114.933 150.528 -6.951 -2.760 0.244 C18 UK4 12 UK4 C19 C13 C 0 1 Y N N 125.782 114.828 151.861 -7.647 -1.577 0.531 C19 UK4 13 UK4 C02 C14 C 0 1 Y N N 135.290 119.174 157.947 8.069 0.567 1.285 C02 UK4 14 UK4 C03 C15 C 0 1 Y N N 136.082 118.084 158.270 7.470 -0.055 0.201 C03 UK4 15 UK4 C04 C16 C 0 1 N N N 137.308 117.769 157.403 5.968 -0.132 0.116 C04 UK4 16 UK4 C06 C17 C 0 1 Y N N 136.578 115.600 156.781 4.265 -0.971 -1.313 C06 UK4 17 UK4 C08 C18 C 0 1 Y N N 134.891 115.399 155.211 2.089 -0.637 -0.623 C08 UK4 18 UK4 C09 C19 C 0 1 N N N 134.078 116.050 154.096 1.133 -0.090 0.405 C09 UK4 19 UK4 C23 C20 C 0 1 Y N N 126.547 115.435 152.848 -6.973 -0.357 0.556 C23 UK4 20 UK4 C24 C21 C 0 1 Y N N 127.701 116.156 152.500 -5.615 -0.323 0.294 C24 UK4 21 UK4 C31 C22 C 0 1 N N N 132.229 117.742 154.564 -1.083 -0.416 1.509 C31 UK4 22 UK4 C32 C23 C 0 1 N N N 133.533 117.093 155.016 -0.088 -1.009 0.509 C32 UK4 23 UK4 C33 C24 C 0 1 Y N N 134.635 114.092 155.585 1.595 -1.278 -1.741 C33 UK4 24 UK4 C34 C25 C 0 1 Y N N 135.396 113.538 156.602 2.481 -1.780 -2.684 C34 UK4 25 UK4 C35 C26 C 0 1 Y N N 136.382 114.299 157.210 3.838 -1.627 -2.461 C35 UK4 26 UK4 C36 C27 C 0 1 Y N N 135.761 117.302 159.371 8.246 -0.605 -0.803 C36 UK4 27 UK4 C37 C28 C 0 1 Y N N 134.648 117.606 160.138 9.622 -0.539 -0.732 C37 UK4 28 UK4 C38 C29 C 0 1 Y N N 133.860 118.695 159.811 10.233 0.087 0.357 C38 UK4 29 UK4 C39 C30 C 0 1 N N N 132.633 119.037 160.656 11.661 0.160 0.436 C39 UK4 30 UK4 C41 C31 C 0 1 Y N N 134.180 119.479 158.715 9.446 0.641 1.368 C41 UK4 31 UK4 F01 F1 F 0 1 N N N 135.602 119.949 156.870 7.304 1.108 2.259 F01 UK4 32 UK4 N07 N1 N 0 1 Y N N 135.839 116.093 155.810 3.389 -0.502 -0.440 N07 UK4 33 UK4 N12 N2 N 0 1 N N N 131.920 117.434 153.144 -1.491 0.922 1.061 N12 UK4 34 UK4 N15 N3 N 0 1 Y N N 129.194 116.990 151.142 -3.627 -1.176 -0.205 N15 UK4 35 UK4 N25 N4 N 0 1 Y N N 128.612 116.837 153.214 -4.673 0.687 0.238 N25 UK4 36 UK4 N40 N5 N 0 1 N N N 131.724 119.289 161.283 12.794 0.218 0.498 N40 UK4 37 UK4 O05 O1 O 0 1 N N N 137.571 116.391 157.383 5.593 -0.815 -1.082 O05 UK4 38 UK4 O21 O2 O 0 1 N N N 123.706 113.711 151.339 -9.700 -0.600 1.056 O21 UK4 39 UK4 O22 O3 O 0 1 N N N 124.319 113.712 153.430 -9.748 -2.803 0.784 O22 UK4 40 UK4 O30 O4 O 0 1 N N N 128.183 119.367 154.183 -6.672 2.716 -1.168 O30 UK4 41 UK4 H1 H1 H 0 1 N N N 126.369 120.425 154.518 -7.462 4.648 -1.522 H1 UK4 42 UK4 H2 H2 H 0 1 N N N 126.417 119.462 153.002 -6.271 4.058 -2.757 H2 UK4 43 UK4 H3 H3 H 0 1 N N N 125.933 118.437 155.693 -4.602 4.886 -1.155 H3 UK4 44 UK4 H4 H4 H 0 1 N N N 126.198 117.458 154.211 -5.744 4.662 0.250 H4 UK4 45 UK4 H5 H5 H 0 1 N N N 128.198 118.508 156.133 -4.628 2.485 -1.673 H5 UK4 46 UK4 H6 H6 H 0 1 N N N 128.064 116.142 155.107 -4.014 2.572 0.880 H6 UK4 47 UK4 H7 H7 H 0 1 N N N 129.650 116.981 155.022 -5.736 2.233 1.177 H7 UK4 48 UK4 H8 H8 H 0 1 N N N 130.986 118.815 151.903 -1.552 0.333 -0.955 H8 UK4 49 UK4 H9 H9 H 0 1 N N N 130.441 118.816 153.614 -2.381 1.865 -0.592 H9 UK4 50 UK4 H10 H10 H 0 1 N N N 130.974 115.613 153.650 0.124 1.898 1.982 H10 UK4 51 UK4 H11 H11 H 0 1 N N N 131.503 115.749 151.938 -0.682 2.825 0.694 H11 UK4 52 UK4 H12 H12 H 0 1 N N N 132.818 114.359 153.927 0.212 1.259 -1.002 H12 UK4 53 UK4 H13 H13 H 0 1 N N N 133.543 114.927 152.385 1.534 1.979 -0.051 H13 UK4 54 UK4 H14 H14 H 0 1 N N N 127.591 115.723 149.145 -5.087 -3.648 -0.234 H14 UK4 55 UK4 H15 H15 H 0 1 N N N 125.565 114.461 149.760 -7.480 -3.702 0.227 H15 UK4 56 UK4 H16 H16 H 0 1 N N N 138.183 118.296 157.812 5.582 -0.675 0.979 H16 UK4 57 UK4 H17 H17 H 0 1 N N N 137.120 118.114 156.376 5.552 0.875 0.105 H17 UK4 58 UK4 H18 H18 H 0 1 N N N 134.772 116.525 153.387 1.630 -0.034 1.374 H18 UK4 59 UK4 H19 H19 H 0 1 N N N 126.254 115.353 153.884 -7.508 0.555 0.776 H19 UK4 60 UK4 H20 H20 H 0 1 N N N 132.315 118.832 154.681 -1.959 -1.060 1.575 H20 UK4 61 UK4 H21 H21 H 0 1 N N N 131.409 117.369 155.195 -0.612 -0.342 2.490 H21 UK4 62 UK4 H22 H22 H 0 1 N N N 133.358 116.624 155.996 -0.562 -1.095 -0.468 H22 UK4 63 UK4 H23 H23 H 0 1 N N N 134.289 117.885 155.118 0.227 -1.995 0.850 H23 UK4 64 UK4 H24 H24 H 0 1 N N N 133.862 113.518 155.097 0.529 -1.384 -1.883 H24 UK4 65 UK4 H25 H25 H 0 1 N N N 135.222 112.520 156.919 2.120 -2.285 -3.568 H25 UK4 66 UK4 H26 H26 H 0 1 N N N 136.986 113.884 158.004 4.556 -2.012 -3.170 H26 UK4 67 UK4 H27 H27 H 0 1 N N N 136.380 116.456 159.630 7.774 -1.089 -1.645 H27 UK4 68 UK4 H28 H28 H 0 1 N N N 134.396 116.993 160.991 10.226 -0.969 -1.517 H28 UK4 69 UK4 H29 H29 H 0 1 N N N 133.563 120.328 158.460 9.913 1.126 2.213 H29 UK4 70 UK4 H31 H31 H 0 1 N N N 123.504 113.227 153.489 -10.697 -2.783 0.971 H31 UK4 71 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UK4 C17 C18 DOUB Y N 1 UK4 C17 C16 SING Y N 2 UK4 C18 C19 SING Y N 3 UK4 N15 C16 SING Y N 4 UK4 N15 C14 DOUB Y N 5 UK4 C16 C24 DOUB Y N 6 UK4 O21 C20 DOUB N N 7 UK4 C19 C20 SING N N 8 UK4 C19 C23 DOUB Y N 9 UK4 C20 O22 SING N N 10 UK4 C14 C13 SING N N 11 UK4 C14 N25 SING Y N 12 UK4 C24 C23 SING Y N 13 UK4 C24 N25 SING Y N 14 UK4 C13 N12 SING N N 15 UK4 C11 N12 SING N N 16 UK4 C11 C10 SING N N 17 UK4 N12 C31 SING N N 18 UK4 N25 C26 SING N N 19 UK4 C10 C09 SING N N 20 UK4 C29 O30 SING N N 21 UK4 C29 C28 SING N N 22 UK4 C09 C32 SING N N 23 UK4 C09 C08 SING N N 24 UK4 O30 C27 SING N N 25 UK4 C31 C32 SING N N 26 UK4 C26 C27 SING N N 27 UK4 C28 C27 SING N N 28 UK4 C08 C33 DOUB Y N 29 UK4 C08 N07 SING Y N 30 UK4 C33 C34 SING Y N 31 UK4 N07 C06 DOUB Y N 32 UK4 C34 C35 DOUB Y N 33 UK4 C06 C35 SING Y N 34 UK4 C06 O05 SING N N 35 UK4 F01 C02 SING N N 36 UK4 O05 C04 SING N N 37 UK4 C04 C03 SING N N 38 UK4 C02 C03 DOUB Y N 39 UK4 C02 C41 SING Y N 40 UK4 C03 C36 SING Y N 41 UK4 C41 C38 DOUB Y N 42 UK4 C36 C37 DOUB Y N 43 UK4 C38 C37 SING Y N 44 UK4 C38 C39 SING N N 45 UK4 C39 N40 TRIP N N 46 UK4 C29 H1 SING N N 47 UK4 C29 H2 SING N N 48 UK4 C28 H3 SING N N 49 UK4 C28 H4 SING N N 50 UK4 C27 H5 SING N N 51 UK4 C26 H6 SING N N 52 UK4 C26 H7 SING N N 53 UK4 C13 H8 SING N N 54 UK4 C13 H9 SING N N 55 UK4 C11 H10 SING N N 56 UK4 C11 H11 SING N N 57 UK4 C10 H12 SING N N 58 UK4 C10 H13 SING N N 59 UK4 C17 H14 SING N N 60 UK4 C18 H15 SING N N 61 UK4 C04 H16 SING N N 62 UK4 C04 H17 SING N N 63 UK4 C09 H18 SING N N 64 UK4 C23 H19 SING N N 65 UK4 C31 H20 SING N N 66 UK4 C31 H21 SING N N 67 UK4 C32 H22 SING N N 68 UK4 C32 H23 SING N N 69 UK4 C33 H24 SING N N 70 UK4 C34 H25 SING N N 71 UK4 C35 H26 SING N N 72 UK4 C36 H27 SING N N 73 UK4 C37 H28 SING N N 74 UK4 C41 H29 SING N N 75 UK4 O22 H31 SING N N 76 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UK4 SMILES ACDLabs 12.01 "C1OC(C1)Cn6c(CN4CCC(c3cccc(OCc2c(cc(cc2)C#N)F)n3)CC4)nc5c6cc(C(O)=O)cc5" UK4 InChI InChI 1.03 "InChI=1S/C31H30FN5O4/c32-25-14-20(16-33)4-5-23(25)19-41-30-3-1-2-26(35-30)21-8-11-36(12-9-21)18-29-34-27-7-6-22(31(38)39)15-28(27)37(29)17-24-10-13-40-24/h1-7,14-15,21,24H,8-13,17-19H2,(H,38,39)/t24-/m0/s1" UK4 InChIKey InChI 1.03 HYBAKUMPISVZQP-DEOSSOPVSA-N UK4 SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc2nc(CN3CCC(CC3)c4cccc(OCc5ccc(cc5F)C#N)n4)n(C[C@@H]6CCO6)c2c1" UK4 SMILES CACTVS 3.385 "OC(=O)c1ccc2nc(CN3CCC(CC3)c4cccc(OCc5ccc(cc5F)C#N)n4)n(C[CH]6CCO6)c2c1" UK4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(nc(c1)OCc2ccc(cc2F)C#N)C3CCN(CC3)Cc4nc5ccc(cc5n4C[C@@H]6CCO6)C(=O)O" UK4 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(nc(c1)OCc2ccc(cc2F)C#N)C3CCN(CC3)Cc4nc5ccc(cc5n4CC6CCO6)C(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UK4 "SYSTEMATIC NAME" ACDLabs 12.01 "2-[(4-{6-[(4-cyano-2-fluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-{[(2S)-oxetan-2-yl]methyl}-1H-benzimidazole-6-carboxylic acid" UK4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[4-[6-[(4-cyano-2-fluoranyl-phenyl)methoxy]pyridin-2-yl]piperidin-1-yl]methyl]-3-[[(2~{S})-oxetan-2-yl]methyl]benzimidazole-5-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UK4 "Create component" 2020-05-19 RCSB UK4 "Initial release" 2020-09-09 RCSB ##