data_UKQ # _chem_comp.id UKQ _chem_comp.name "(1R,6S)-5beta-(Hydroxymethyl)-7-oxabicyclo[4.1.0]heptane-2beta,3beta,4alpha-triol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H12 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(1~{R},2~{S},3~{S},4~{R},5~{R},6~{S})-5-(hydroxymethyl)-7-oxabicyclo[4.1.0]heptane-2,3,4-triol; epi-manno-cyclophellitol" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-28 _chem_comp.pdbx_modified_date 2021-04-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 176.167 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UKQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7NL5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UKQ C7 C1 C 0 1 N N S 17.392 2.983 19.677 0.176 -1.759 0.035 C7 UKQ 1 UKQ O1 O1 O 0 1 N N N 18.226 2.630 18.556 -0.706 -2.139 -1.034 O1 UKQ 2 UKQ C1 C2 C 0 1 N N S 17.134 1.759 18.836 -1.330 -1.563 0.105 C1 UKQ 3 UKQ C5 C3 C 0 1 N N R 16.484 4.162 19.349 1.095 -0.580 -0.244 C5 UKQ 4 UKQ C6 C4 C 0 1 N N N 16.700 5.347 20.282 2.341 -0.703 0.637 C6 UKQ 5 UKQ C4 C5 C 0 1 N N R 15.011 3.757 19.222 0.426 0.749 0.036 C4 UKQ 6 UKQ O4 O2 O 0 1 N N N 14.340 4.930 18.790 1.225 1.794 -0.521 O4 UKQ 7 UKQ C3 C6 C 0 1 N N S 14.761 2.620 18.197 -0.967 0.840 -0.547 C3 UKQ 8 UKQ O3 O3 O 0 1 N N N 13.746 1.750 18.772 -1.482 2.152 -0.308 O3 UKQ 9 UKQ C2 C7 C 0 1 N N S 16.035 1.859 17.776 -1.917 -0.168 0.041 C2 UKQ 10 UKQ O6 O4 O 0 1 N N N 16.223 5.177 21.630 3.265 0.334 0.302 O6 UKQ 11 UKQ O2 O5 O 0 1 N N N 15.742 0.527 17.278 -2.265 0.243 1.365 O2 UKQ 12 UKQ H1 H1 H 0 1 N N N 17.754 2.861 20.708 0.606 -2.558 0.638 H1 UKQ 13 UKQ H2 H2 H 0 1 N N N 17.321 0.773 19.286 -1.873 -2.250 0.753 H2 UKQ 14 UKQ H3 H3 H 0 1 N N N 16.787 4.507 18.349 1.399 -0.608 -1.290 H3 UKQ 15 UKQ H4 H4 H 0 1 N N N 17.781 5.547 20.329 2.055 -0.610 1.684 H4 UKQ 16 UKQ H5 H5 H 0 1 N N N 16.184 6.217 19.848 2.808 -1.674 0.471 H5 UKQ 17 UKQ H6 H6 H 0 1 N N N 14.640 3.437 20.207 0.365 0.892 1.115 H6 UKQ 18 UKQ H7 H7 H 0 1 N N N 14.490 5.630 19.415 0.864 2.681 -0.385 H7 UKQ 19 UKQ H8 H8 H 0 1 N N N 14.345 3.085 17.291 -0.909 0.677 -1.623 H8 UKQ 20 UKQ H9 H9 H 0 1 N N N 12.986 2.266 19.013 -2.374 2.293 -0.651 H9 UKQ 21 UKQ H10 H10 H 0 1 N N N 16.467 2.429 16.940 -2.822 -0.195 -0.566 H10 UKQ 22 UKQ H11 H11 H 0 1 N N N 16.402 5.964 22.131 4.080 0.317 0.822 H11 UKQ 23 UKQ H12 H12 H 0 1 N N N 16.552 0.096 17.031 -2.695 1.108 1.408 H12 UKQ 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UKQ O2 C2 SING N N 1 UKQ C2 C3 SING N N 2 UKQ C2 C1 SING N N 3 UKQ C3 O3 SING N N 4 UKQ C3 C4 SING N N 5 UKQ O1 C1 SING N N 6 UKQ O1 C7 SING N N 7 UKQ O4 C4 SING N N 8 UKQ C1 C7 SING N N 9 UKQ C4 C5 SING N N 10 UKQ C5 C7 SING N N 11 UKQ C5 C6 SING N N 12 UKQ C6 O6 SING N N 13 UKQ C7 H1 SING N N 14 UKQ C1 H2 SING N N 15 UKQ C5 H3 SING N N 16 UKQ C6 H4 SING N N 17 UKQ C6 H5 SING N N 18 UKQ C4 H6 SING N N 19 UKQ O4 H7 SING N N 20 UKQ C3 H8 SING N N 21 UKQ O3 H9 SING N N 22 UKQ C2 H10 SING N N 23 UKQ O6 H11 SING N N 24 UKQ O2 H12 SING N N 25 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UKQ InChI InChI 1.03 "InChI=1S/C7H12O5/c8-1-2-3(9)4(10)5(11)7-6(2)12-7/h2-11H,1H2/t2-,3-,4+,5+,6+,7-/m1/s1" UKQ InChIKey InChI 1.03 YQLWKYQDOQEWRD-BYNCVWKDSA-N UKQ SMILES_CANONICAL CACTVS 3.385 "OC[C@@H]1[C@@H](O)[C@H](O)[C@H](O)[C@H]2O[C@@H]12" UKQ SMILES CACTVS 3.385 "OC[CH]1[CH](O)[CH](O)[CH](O)[CH]2O[CH]12" UKQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@@H]([C@@H]2[C@H]1O2)O)O)O)O" UKQ SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C2C1O2)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id UKQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R},2~{S},3~{S},4~{R},5~{R},6~{S})-5-(hydroxymethyl)-7-oxabicyclo[4.1.0]heptane-2,3,4-triol" # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 UKQ "(1~{R},2~{S},3~{S},4~{R},5~{R},6~{S})-5-(hydroxymethyl)-7-oxabicyclo[4.1.0]heptane-2,3,4-triol" PDB ? 2 UKQ 101611974 PUBCHEM ? 3 UKQ epi-manno-cyclophellitol AUTHOR ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UKQ "Create component" 2021-02-28 PDBE UKQ "Initial release" 2021-04-28 RCSB ##