data_UKT # _chem_comp.id UKT _chem_comp.name "(1R,2R,3R,4S,5R)-4-(hydroxymethyl)cyclohexane-1,2,3,5-tetrol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H14 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(1~{R},2~{R},3~{R},4~{S},5~{R})-4-(hydroxymethyl)cyclohexane-1,2,3,5-tetrol" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-28 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 178.183 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UKT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7NL5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UKT C4 C1 C 0 1 N N R N N N 19.001 2.452 18.408 -1.626 0.317 -0.553 C4 UKT 1 UKT C2 C2 C 0 1 N N S N N N 17.834 3.713 20.161 0.849 0.431 -0.236 C2 UKT 2 UKT C6 C3 C 0 1 N N N N N N 16.960 1.364 19.788 -0.259 -1.772 -0.643 C6 UKT 3 UKT C5 C4 C 0 1 N N R N N N 17.823 1.430 18.467 -1.601 -1.175 -0.216 C5 UKT 4 UKT O10 O1 O 0 1 N N N N N N 19.519 4.777 18.788 -0.517 2.421 -0.123 O10 UKT 5 UKT C3 C5 C 0 1 N N R N N N 18.455 3.826 18.785 -0.493 1.027 0.191 C3 UKT 6 UKT C1 C6 C 0 1 N N N N N N 17.489 5.088 20.698 1.982 1.140 0.508 C1 UKT 7 UKT O8 O2 O 0 1 N N N N N N 16.417 4.941 21.650 3.240 0.665 0.025 O8 UKT 8 UKT O11 O3 O 0 1 N N N N N N 19.680 2.510 17.132 -2.880 0.874 -0.154 O11 UKT 9 UKT O12 O4 O 0 1 N N N N N N 17.008 1.740 17.326 -1.773 -1.349 1.192 O12 UKT 10 UKT C7 C7 C 0 1 N N R N N N 16.631 2.765 20.130 0.874 -1.062 0.101 C7 UKT 11 UKT O13 O5 O 0 1 N N N N N N 16.033 2.604 21.396 2.128 -1.619 -0.298 O13 UKT 12 UKT H1 H1 H 0 1 N N N N N N 19.727 2.158 19.180 -1.495 0.450 -1.627 H1 UKT 13 UKT H2 H2 H 0 1 N N N N N N 18.586 3.271 20.832 0.981 0.563 -1.310 H2 UKT 14 UKT H3 H3 H 0 1 N N N N N N 16.040 0.787 19.615 -0.241 -2.835 -0.403 H3 UKT 15 UKT H4 H4 H 0 1 N N N N N N 17.538 0.898 20.600 -0.127 -1.639 -1.717 H4 UKT 16 UKT H5 H5 H 0 1 N N N N N N 18.258 0.430 18.323 -2.408 -1.681 -0.746 H5 UKT 17 UKT H6 H6 H 0 1 N N N N N N 19.179 5.632 19.023 -1.340 2.865 0.121 H6 UKT 18 UKT H7 H7 H 0 1 N N N N N N 17.681 4.117 18.060 -0.625 0.894 1.265 H7 UKT 19 UKT H8 H8 H 0 1 N N N N N N 18.369 5.527 21.192 1.911 2.215 0.340 H8 UKT 20 UKT H9 H9 H 0 1 N N N N N N 17.168 5.741 19.873 1.901 0.934 1.576 H9 UKT 21 UKT H10 H10 H 0 1 N N N N N N 16.184 5.793 22.000 4.006 1.073 0.453 H10 UKT 22 UKT H11 H11 H 0 1 N N N N N N 20.380 3.151 17.174 -3.645 0.471 -0.587 H11 UKT 23 UKT H12 H12 H 0 1 N N N N N N 16.264 1.150 17.298 -1.768 -2.273 1.478 H12 UKT 24 UKT H13 H13 H 0 1 N N N N N N 15.897 3.153 19.408 0.743 -1.194 1.175 H13 UKT 25 UKT H14 H14 H 0 1 N N N N N N 15.771 3.453 21.733 2.215 -2.565 -0.115 H14 UKT 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UKT O11 C4 SING N N 1 UKT O12 C5 SING N N 2 UKT C4 C5 SING N N 3 UKT C4 C3 SING N N 4 UKT C5 C6 SING N N 5 UKT C3 O10 SING N N 6 UKT C3 C2 SING N N 7 UKT C6 C7 SING N N 8 UKT C7 C2 SING N N 9 UKT C7 O13 SING N N 10 UKT C2 C1 SING N N 11 UKT C1 O8 SING N N 12 UKT C4 H1 SING N N 13 UKT C2 H2 SING N N 14 UKT C6 H3 SING N N 15 UKT C6 H4 SING N N 16 UKT C5 H5 SING N N 17 UKT O10 H6 SING N N 18 UKT C3 H7 SING N N 19 UKT C1 H8 SING N N 20 UKT C1 H9 SING N N 21 UKT O8 H10 SING N N 22 UKT O11 H11 SING N N 23 UKT O12 H12 SING N N 24 UKT C7 H13 SING N N 25 UKT O13 H14 SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UKT InChI InChI 1.03 "InChI=1S/C7H14O5/c8-2-3-4(9)1-5(10)7(12)6(3)11/h3-12H,1-2H2/t3-,4+,5+,6+,7+/m0/s1" UKT InChIKey InChI 1.03 RRGKETGQYFXIFR-CQOGJGKDSA-N UKT SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1[C@H](O)C[C@@H](O)[C@@H](O)[C@@H]1O" UKT SMILES CACTVS 3.385 "OC[CH]1[CH](O)C[CH](O)[CH](O)[CH]1O" UKT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@H]([C@@H]([C@H]([C@@H]([C@@H]1O)O)O)CO)O" UKT SMILES "OpenEye OEToolkits" 2.0.7 "C1C(C(C(C(C1O)O)O)CO)O" # _pdbx_chem_comp_identifier.comp_id UKT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R},2~{R},3~{R},4~{S},5~{R})-4-(hydroxymethyl)cyclohexane-1,2,3,5-tetrol" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id UKT _pdbx_chem_comp_synonyms.name "(1~{R},2~{R},3~{R},4~{S},5~{R})-4-(hydroxymethyl)cyclohexane-1,2,3,5-tetrol" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UKT "Create component" 2021-02-28 PDBE UKT "Initial release" 2021-04-28 RCSB UKT "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id UKT _pdbx_chem_comp_pcm.modified_residue_id ASP _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C6 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OD2 _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #