data_ULX # _chem_comp.id ULX _chem_comp.name "[4-({[(3R)-1-[(1H-indol-3-yl)methyl]-3-{[4-(trifluoromethyl)phenyl]methyl}pyrrolidin-3-yl]methyl}amino)-3-nitrophenyl]methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H31 F3 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-23 _chem_comp.pdbx_modified_date 2023-07-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 540.577 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ULX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8E5R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ULX C1 C1 C 0 1 Y N N 113.133 5.228 14.822 3.017 -2.986 -2.171 C1 ULX 1 ULX C10 C2 C 0 1 Y N N 104.359 11.240 12.179 -6.264 -0.751 1.591 C10 ULX 2 ULX C11 C3 C 0 1 N N R 109.273 9.345 14.426 -0.607 0.282 0.813 C11 ULX 3 ULX C12 C4 C 0 1 Y N N 104.900 12.364 10.318 -7.179 0.123 -0.266 C12 ULX 4 ULX C13 C5 C 0 1 N N N 109.839 7.372 20.662 3.953 4.663 -0.469 C13 ULX 5 ULX C14 C6 C 0 1 N N N 109.493 10.175 13.183 -1.460 1.328 0.060 C14 ULX 6 ULX C15 C7 C 0 1 N N N 108.272 11.069 13.132 -2.795 0.579 -0.180 C15 ULX 7 ULX C16 C8 C 0 1 Y N N 106.011 11.443 10.626 -5.851 -0.232 -0.567 C16 ULX 8 ULX C17 C9 C 0 1 N N N 107.760 9.242 14.566 -1.622 -0.698 1.428 C17 ULX 9 ULX C18 C10 C 0 1 Y N N 105.007 13.176 9.193 -7.972 0.694 -1.255 C18 ULX 10 ULX C19 C11 C 0 1 Y N N 106.153 13.093 8.403 -7.452 0.905 -2.513 C19 ULX 11 ULX C2 C12 C 0 1 Y N N 114.323 5.437 14.129 3.640 -4.029 -1.511 C2 ULX 12 ULX C20 C13 C 0 1 Y N N 107.200 12.221 8.711 -6.142 0.553 -2.805 C20 ULX 13 ULX C21 C14 C 0 1 Y N N 107.145 11.385 9.825 -5.344 -0.009 -1.848 C21 ULX 14 ULX C22 C15 C 0 1 N N N 109.915 10.077 15.591 0.213 0.959 1.914 C22 ULX 15 ULX C23 C16 C 0 1 Y N N 109.914 9.347 16.909 1.188 1.925 1.292 C23 ULX 16 ULX C24 C17 C 0 1 Y N N 108.805 9.428 17.729 2.468 1.508 0.977 C24 ULX 17 ULX C25 C18 C 0 1 Y N N 108.778 8.783 18.947 3.363 2.394 0.407 C25 ULX 18 ULX C26 C19 C 0 1 Y N N 109.888 8.060 19.345 2.978 3.697 0.152 C26 ULX 19 ULX C27 C20 C 0 1 Y N N 111.015 7.972 18.542 1.698 4.114 0.466 C27 ULX 20 ULX C28 C21 C 0 1 Y N N 111.027 8.618 17.317 0.802 3.226 1.032 C28 ULX 21 ULX C3 C22 C 0 1 Y N N 114.500 6.596 13.387 3.417 -4.229 -0.161 C3 ULX 22 ULX C30 C23 C 0 1 N N N 109.940 7.994 14.221 0.318 -0.452 -0.161 C30 ULX 23 ULX C4 C24 C 0 1 Y N N 113.487 7.543 13.323 2.566 -3.384 0.534 C4 ULX 24 ULX C5 C25 C 0 1 Y N N 112.299 7.337 14.004 1.937 -2.332 -0.132 C5 ULX 25 ULX C6 C26 C 0 1 Y N N 112.119 6.181 14.758 2.171 -2.135 -1.485 C6 ULX 26 ULX C7 C27 C 0 1 N N N 115.444 4.429 14.178 4.565 -4.949 -2.265 C7 ULX 27 ULX C8 C28 C 0 1 N N N 106.399 9.666 12.613 -3.897 -1.330 0.854 C8 ULX 28 ULX C9 C29 C 0 1 Y N N 105.616 10.725 11.861 -5.294 -0.798 0.664 C9 ULX 29 ULX F14 F1 F 0 1 N N N 110.638 6.321 20.638 3.666 5.961 -0.033 F14 ULX 30 ULX F15 F2 F 0 1 N N N 110.237 8.194 21.614 5.255 4.321 -0.089 F15 ULX 31 ULX F16 F3 F 0 1 N N N 108.587 7.009 20.870 3.844 4.605 -1.863 F16 ULX 32 ULX N11 N1 N 0 1 Y N N 103.969 12.187 11.274 -7.398 -0.208 1.053 N11 ULX 33 ULX N12 N2 N 0 1 N N N 111.333 8.277 13.930 1.076 -1.475 0.564 N12 ULX 34 ULX N16 N3 N 0 1 N N N 107.168 10.283 13.707 -2.971 -0.210 1.066 N16 ULX 35 ULX N17 N4 N 0 1 N N N 113.687 8.705 12.563 2.338 -3.586 1.900 N17 ULX 36 ULX O10 O1 O 0 1 N N N 114.908 8.907 11.929 3.193 -2.716 2.709 O10 ULX 37 ULX O11 O2 O 0 1 N N N 112.679 9.657 12.444 0.927 -3.388 2.231 O11 ULX 38 ULX O9 O3 O 0 1 N N N 115.505 3.833 15.477 5.897 -4.434 -2.212 O9 ULX 39 ULX H1 H1 H 0 1 N N N 112.997 4.330 15.407 3.195 -2.834 -3.226 H1 ULX 40 ULX H2 H2 H 0 1 N N N 103.770 10.930 13.030 -6.165 -1.096 2.610 H2 ULX 41 ULX H3 H3 H 0 1 N N N 109.550 9.536 12.289 -1.620 2.212 0.677 H3 ULX 42 ULX H4 H4 H 0 1 N N N 110.413 10.771 13.267 -0.991 1.600 -0.886 H4 ULX 43 ULX H5 H5 H 0 1 N N N 108.441 11.980 13.724 -3.615 1.285 -0.308 H5 ULX 44 ULX H6 H6 H 0 1 N N N 108.043 11.345 12.092 -2.715 -0.081 -1.045 H6 ULX 45 ULX H7 H7 H 0 1 N N N 107.467 9.407 15.613 -1.468 -1.697 1.021 H7 ULX 46 ULX H8 H8 H 0 1 N N N 107.419 8.248 14.242 -1.510 -0.717 2.512 H8 ULX 47 ULX H9 H9 H 0 1 N N N 104.213 13.861 8.935 -8.994 0.971 -1.037 H9 ULX 48 ULX H10 H10 H 0 1 N N N 106.233 13.721 7.528 -8.070 1.348 -3.280 H10 ULX 49 ULX H11 H11 H 0 1 N N N 108.071 12.194 8.072 -5.749 0.725 -3.796 H11 ULX 50 ULX H12 H12 H 0 1 N N N 107.958 10.713 10.058 -4.325 -0.280 -2.083 H12 ULX 51 ULX H13 H13 H 0 1 N N N 110.961 10.286 15.322 -0.455 1.498 2.585 H13 ULX 52 ULX H14 H14 H 0 1 N N N 109.376 11.026 15.731 0.760 0.202 2.477 H14 ULX 53 ULX H15 H15 H 0 1 N N N 107.948 10.004 17.412 2.769 0.490 1.177 H15 ULX 54 ULX H16 H16 H 0 1 N N N 107.905 8.841 19.580 4.363 2.069 0.162 H16 ULX 55 ULX H17 H17 H 0 1 N N N 111.875 7.406 18.868 1.397 5.131 0.267 H17 ULX 56 ULX H18 H18 H 0 1 N N N 111.897 8.556 16.680 -0.200 3.550 1.274 H18 ULX 57 ULX H19 H19 H 0 1 N N N 115.427 6.762 12.858 3.905 -5.045 0.351 H19 ULX 58 ULX H20 H20 H 0 1 N N N 109.474 7.461 13.379 -0.279 -0.926 -0.940 H20 ULX 59 ULX H21 H21 H 0 1 N N N 109.856 7.384 15.132 1.008 0.259 -0.613 H21 ULX 60 ULX H22 H22 H 0 1 N N N 111.194 6.023 15.293 1.686 -1.321 -2.003 H22 ULX 61 ULX H23 H23 H 0 1 N N N 115.265 3.647 13.426 4.541 -5.940 -1.812 H23 ULX 62 ULX H24 H24 H 0 1 N N N 116.398 4.933 13.963 4.243 -5.017 -3.304 H24 ULX 63 ULX H25 H25 H 0 1 N N N 105.701 8.927 13.032 -3.874 -1.989 1.722 H25 ULX 64 ULX H26 H26 H 0 1 N N N 107.091 9.165 11.920 -3.596 -1.887 -0.033 H26 ULX 65 ULX H27 H27 H 0 1 N N N 103.103 12.685 11.317 -8.232 -0.074 1.530 H27 ULX 66 ULX H28 H28 H 0 1 N N N 111.605 9.004 14.560 0.982 -1.559 1.525 H28 ULX 67 ULX H30 H30 H 0 1 N N N 116.212 3.199 15.502 6.548 -4.977 -2.678 H30 ULX 68 ULX H29 H29 H 0 1 N N N 115.483 8.172 12.107 4.138 -2.812 2.524 H29 ULX 69 ULX H31 H31 H 0 1 N N N 111.915 9.372 12.932 0.331 -4.020 1.806 H31 ULX 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ULX C19 C20 DOUB Y N 1 ULX C19 C18 SING Y N 2 ULX C20 C21 SING Y N 3 ULX C18 C12 DOUB Y N 4 ULX C21 C16 DOUB Y N 5 ULX C12 C16 SING Y N 6 ULX C12 N11 SING Y N 7 ULX C16 C9 SING Y N 8 ULX N11 C10 SING Y N 9 ULX C9 C10 DOUB Y N 10 ULX C9 C8 SING N N 11 ULX O10 N17 SING N N 12 ULX O11 N17 SING N N 13 ULX N17 C4 SING N N 14 ULX C8 N16 SING N N 15 ULX C15 C14 SING N N 16 ULX C15 N16 SING N N 17 ULX C14 C11 SING N N 18 ULX C4 C3 DOUB Y N 19 ULX C4 C5 SING Y N 20 ULX C3 C2 SING Y N 21 ULX N16 C17 SING N N 22 ULX N12 C5 SING N N 23 ULX N12 C30 SING N N 24 ULX C5 C6 DOUB Y N 25 ULX C2 C7 SING N N 26 ULX C2 C1 DOUB Y N 27 ULX C7 O9 SING N N 28 ULX C30 C11 SING N N 29 ULX C11 C17 SING N N 30 ULX C11 C22 SING N N 31 ULX C6 C1 SING Y N 32 ULX C22 C23 SING N N 33 ULX C23 C28 DOUB Y N 34 ULX C23 C24 SING Y N 35 ULX C28 C27 SING Y N 36 ULX C24 C25 DOUB Y N 37 ULX C27 C26 DOUB Y N 38 ULX C25 C26 SING Y N 39 ULX C26 C13 SING N N 40 ULX F14 C13 SING N N 41 ULX C13 F16 SING N N 42 ULX C13 F15 SING N N 43 ULX C1 H1 SING N N 44 ULX C10 H2 SING N N 45 ULX C14 H3 SING N N 46 ULX C14 H4 SING N N 47 ULX C15 H5 SING N N 48 ULX C15 H6 SING N N 49 ULX C17 H7 SING N N 50 ULX C17 H8 SING N N 51 ULX C18 H9 SING N N 52 ULX C19 H10 SING N N 53 ULX C20 H11 SING N N 54 ULX C21 H12 SING N N 55 ULX C22 H13 SING N N 56 ULX C22 H14 SING N N 57 ULX C24 H15 SING N N 58 ULX C25 H16 SING N N 59 ULX C27 H17 SING N N 60 ULX C28 H18 SING N N 61 ULX C3 H19 SING N N 62 ULX C30 H20 SING N N 63 ULX C30 H21 SING N N 64 ULX C6 H22 SING N N 65 ULX C7 H23 SING N N 66 ULX C7 H24 SING N N 67 ULX C8 H25 SING N N 68 ULX C8 H26 SING N N 69 ULX N11 H27 SING N N 70 ULX N12 H28 SING N N 71 ULX O9 H30 SING N N 72 ULX O10 H29 SING N N 73 ULX O11 H31 SING N N 74 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ULX SMILES ACDLabs 12.01 "FC(F)(F)c1ccc(cc1)CC1(CCN(Cc2c[NH]c3ccccc23)C1)CNc1ccc(CO)cc1N(O)O" ULX InChI InChI 1.06 "InChI=1S/C29H31F3N4O3/c30-29(31,32)23-8-5-20(6-9-23)14-28(18-34-26-10-7-21(17-37)13-27(26)36(38)39)11-12-35(19-28)16-22-15-33-25-4-2-1-3-24(22)25/h1-10,13,15,33-34,37-39H,11-12,14,16-19H2/t28-/m0/s1" ULX InChIKey InChI 1.06 IYYLJCBCDAMUPF-NDEPHWFRSA-N ULX SMILES_CANONICAL CACTVS 3.385 "OCc1ccc(NC[C@]2(CCN(Cc3c[nH]c4ccccc34)C2)Cc5ccc(cc5)C(F)(F)F)c(c1)N(O)O" ULX SMILES CACTVS 3.385 "OCc1ccc(NC[C]2(CCN(Cc3c[nH]c4ccccc34)C2)Cc5ccc(cc5)C(F)(F)F)c(c1)N(O)O" ULX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CN3CC[C@](C3)(Cc4ccc(cc4)C(F)(F)F)CNc5ccc(cc5N(O)O)CO" ULX SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CN3CCC(C3)(Cc4ccc(cc4)C(F)(F)F)CNc5ccc(cc5N(O)O)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ULX "SYSTEMATIC NAME" ACDLabs 12.01 "[3-(dihydroxyamino)-4-({[(3R)-1-[(1H-indol-3-yl)methyl]-3-{[4-(trifluoromethyl)phenyl]methyl}pyrrolidin-3-yl]methyl}amino)phenyl]methanol" ULX "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[3-[bis(oxidanyl)amino]-4-[[(3~{R})-1-(1~{H}-indol-3-ylmethyl)-3-[[4-(trifluoromethyl)phenyl]methyl]pyrrolidin-3-yl]methylamino]phenyl]methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ULX "Create component" 2022-08-23 RCSB ULX "Initial release" 2023-07-26 RCSB #