data_UMI # _chem_comp.id UMI _chem_comp.name "[2-(dihydroxyamino)-4-({[(3R)-1-[(1H-indol-3-yl)methyl]-3-{[3-(trifluoromethyl)phenyl]methyl}pyrrolidin-3-yl]methyl}amino)phenyl]methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H31 F3 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-23 _chem_comp.pdbx_modified_date 2023-07-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 540.577 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UMI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8E5Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UMI C1 C1 C 0 1 Y N N -14.545 -3.464 7.887 4.052 1.324 1.841 C1 UMI 1 UMI C10 C2 C 0 1 Y N N -13.142 2.308 6.852 -6.287 1.663 -1.780 C10 UMI 2 UMI C11 C3 C 0 1 N N R -16.676 0.835 4.370 -1.036 -0.126 -0.305 C11 UMI 3 UMI C12 C4 C 0 1 Y N N -12.203 0.308 7.128 -7.639 0.784 -0.216 C12 UMI 4 UMI C14 C5 C 0 1 N N N -17.013 2.274 4.733 -2.027 -0.901 0.589 C14 UMI 5 UMI C15 C6 C 0 1 N N N -15.691 3.002 4.835 -3.308 -0.039 0.609 C15 UMI 6 UMI C16 C7 C 0 1 Y N N -12.366 0.505 5.687 -6.380 0.997 0.375 C16 UMI 7 UMI C17 C8 C 0 1 N N N -15.176 0.820 4.123 -1.802 1.139 -0.749 C17 UMI 8 UMI C18 C9 C 0 1 Y N N -11.662 -0.874 7.554 -8.668 0.243 0.549 C18 UMI 9 UMI C19 C10 C 0 1 Y N N -11.239 -1.783 6.612 -8.441 -0.085 1.867 C19 UMI 10 UMI C2 C11 C 0 1 Y N N -14.331 -2.513 8.890 4.884 2.112 1.069 C2 UMI 11 UMI C20 C12 C 0 1 Y N N -11.424 -1.600 5.253 -7.194 0.118 2.443 C20 UMI 12 UMI C21 C13 C 0 1 Y N N -11.986 -0.441 4.755 -6.175 0.666 1.716 C21 UMI 13 UMI C22 C14 C 0 1 N N N -17.370 0.341 3.105 -0.646 -0.968 -1.521 C22 UMI 14 UMI C23 C15 C 0 1 Y N N -18.882 0.409 3.165 0.005 -2.246 -1.059 C23 UMI 15 UMI C24 C16 C 0 1 Y N N -19.623 -0.727 3.473 -0.748 -3.398 -0.929 C24 UMI 16 UMI C25 C17 C 0 1 Y N N -21.012 -0.667 3.523 -0.150 -4.570 -0.505 C25 UMI 17 UMI C26 C18 C 0 1 Y N N -21.664 0.531 3.253 1.200 -4.591 -0.211 C26 UMI 18 UMI C27 C19 C 0 1 Y N N -20.922 1.661 2.936 1.953 -3.438 -0.340 C27 UMI 19 UMI C28 C20 C 0 1 Y N N -19.542 1.598 2.878 1.357 -2.268 -0.769 C28 UMI 20 UMI C29 C21 C 0 1 N N N -21.608 2.955 2.641 3.425 -3.460 -0.018 C29 UMI 21 UMI C3 C22 C 0 1 Y N N -14.757 -1.207 8.798 4.469 2.542 -0.186 C3 UMI 22 UMI C30 C23 C 0 1 N N N -17.027 -0.039 5.569 0.209 0.261 0.495 C30 UMI 23 UMI C4 C24 C 0 1 Y N N -15.404 -0.788 7.648 3.218 2.177 -0.664 C4 UMI 24 UMI C5 C25 C 0 1 Y N N -15.642 -1.700 6.629 2.386 1.385 0.114 C5 UMI 25 UMI C6 C26 C 0 1 Y N N -15.222 -3.023 6.748 2.808 0.955 1.366 C6 UMI 26 UMI C7 C27 C 0 1 N N N -13.663 -2.908 10.162 6.242 2.508 1.589 C7 UMI 27 UMI C8 C28 C 0 1 N N N -13.380 2.507 4.278 -4.084 1.963 -0.539 C8 UMI 28 UMI C9 C29 C 0 1 Y N N -12.993 1.829 5.558 -5.531 1.565 -0.675 C9 UMI 29 UMI F30 F1 F 0 1 N N N -21.970 2.973 1.378 4.161 -3.216 -1.183 F30 UMI 30 UMI F31 F2 F 0 1 N N N -22.675 3.054 3.409 3.710 -2.472 0.930 F31 UMI 31 UMI F32 F3 F 0 1 N N N -20.786 3.960 2.876 3.771 -4.714 0.497 F32 UMI 32 UMI N11 N1 N 0 1 Y N N -12.668 1.397 7.746 -7.550 1.204 -1.524 N11 UMI 33 UMI N12 N2 N 0 1 N N N -16.285 -1.283 5.519 1.128 1.011 -0.365 N12 UMI 34 UMI N16 N3 N 0 1 N N N -14.794 2.234 3.967 -3.236 0.767 -0.637 N16 UMI 35 UMI N8 N4 N 0 1 N N N -14.485 -0.309 9.850 5.310 3.339 -0.965 N8 UMI 36 UMI O10 O1 O 0 1 N N N -14.845 -0.541 11.182 6.079 2.526 -1.907 O10 UMI 37 UMI O11 O2 O 0 1 N N N -13.804 0.868 9.568 4.550 4.374 -1.665 O11 UMI 38 UMI O9 O3 O 0 1 N N N -13.732 -4.332 10.065 6.435 1.949 2.890 O9 UMI 39 UMI H1 H1 H 0 1 N N N -14.205 -4.484 7.988 4.377 0.992 2.816 H1 UMI 40 UMI H2 H2 H 0 1 N N N -13.571 3.264 7.112 -5.949 2.050 -2.730 H2 UMI 41 UMI H3 H3 H 0 1 N N N -17.639 2.728 3.951 -2.237 -1.881 0.160 H3 UMI 42 UMI H4 H4 H 0 1 N N N -17.544 2.310 5.696 -1.625 -1.006 1.596 H4 UMI 43 UMI H5 H5 H 0 1 N N N -15.325 3.003 5.872 -4.194 -0.675 0.600 H5 UMI 44 UMI H6 H6 H 0 1 N N N -15.787 4.038 4.479 -3.316 0.610 1.484 H6 UMI 45 UMI H7 H7 H 0 1 N N N -14.942 0.254 3.209 -1.573 1.974 -0.087 H7 UMI 46 UMI H8 H8 H 0 1 N N N -14.649 0.371 4.978 -1.553 1.392 -1.780 H8 UMI 47 UMI H9 H9 H 0 1 N N N -11.569 -1.089 8.608 -9.642 0.082 0.110 H9 UMI 48 UMI H10 H10 H 0 1 N N N -10.740 -2.680 6.948 -9.242 -0.504 2.459 H10 UMI 49 UMI H11 H11 H 0 1 N N N -11.123 -2.379 4.568 -7.033 -0.144 3.478 H11 UMI 50 UMI H12 H12 H 0 1 N N N -12.121 -0.283 3.695 -5.208 0.821 2.171 H12 UMI 51 UMI H13 H13 H 0 1 N N N -17.077 -0.706 2.936 -1.539 -1.204 -2.101 H13 UMI 52 UMI H14 H14 H 0 1 N N N -17.029 0.958 2.260 0.053 -0.408 -2.142 H14 UMI 53 UMI H15 H15 H 0 1 N N N -19.118 -1.660 3.674 -1.803 -3.382 -1.159 H15 UMI 54 UMI H16 H16 H 0 1 N N N -21.583 -1.550 3.771 -0.739 -5.470 -0.404 H16 UMI 55 UMI H17 H17 H 0 1 N N N -22.742 0.582 3.290 1.666 -5.506 0.121 H17 UMI 56 UMI H18 H18 H 0 1 N N N -18.975 2.476 2.609 1.945 -1.368 -0.870 H18 UMI 57 UMI H19 H19 H 0 1 N N N -16.774 0.497 6.495 -0.081 0.880 1.344 H19 UMI 58 UMI H20 H20 H 0 1 N N N -18.105 -0.259 5.555 0.704 -0.641 0.855 H20 UMI 59 UMI H21 H21 H 0 1 N N N -15.721 0.239 7.545 2.894 2.509 -1.638 H21 UMI 60 UMI H22 H22 H 0 1 N N N -15.423 -3.719 5.947 2.161 0.338 1.972 H22 UMI 61 UMI H23 H23 H 0 1 N N N -12.622 -2.554 10.200 7.012 2.133 0.915 H23 UMI 62 UMI H24 H24 H 0 1 N N N -14.210 -2.534 11.040 6.306 3.594 1.647 H24 UMI 63 UMI H25 H25 H 0 1 N N N -12.748 2.129 3.461 -3.823 2.659 -1.336 H25 UMI 64 UMI H26 H26 H 0 1 N N N -13.234 3.592 4.383 -3.928 2.441 0.427 H26 UMI 65 UMI H28 H28 H 0 1 N N N -16.933 -2.002 5.267 0.863 1.249 -1.267 H28 UMI 66 UMI H30 H30 H 0 1 N N N -13.331 -4.722 10.833 7.290 2.163 3.287 H30 UMI 67 UMI H27 H27 H 0 1 N N N -12.668 1.527 8.738 -8.275 1.179 -2.168 H27 UMI 68 UMI H29 H29 H 0 1 N N N -14.565 0.191 11.718 6.599 1.826 -1.489 H29 UMI 69 UMI H31 H31 H 0 1 N N N -13.693 1.370 10.367 4.092 4.991 -1.078 H31 UMI 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UMI F30 C29 SING N N 1 UMI C29 F32 SING N N 2 UMI C29 C27 SING N N 3 UMI C29 F31 SING N N 4 UMI C28 C27 DOUB Y N 5 UMI C28 C23 SING Y N 6 UMI C27 C26 SING Y N 7 UMI C22 C23 SING N N 8 UMI C22 C11 SING N N 9 UMI C23 C24 DOUB Y N 10 UMI C26 C25 DOUB Y N 11 UMI C24 C25 SING Y N 12 UMI N16 C17 SING N N 13 UMI N16 C8 SING N N 14 UMI N16 C15 SING N N 15 UMI C17 C11 SING N N 16 UMI C8 C9 SING N N 17 UMI C11 C14 SING N N 18 UMI C11 C30 SING N N 19 UMI C14 C15 SING N N 20 UMI C21 C20 DOUB Y N 21 UMI C21 C16 SING Y N 22 UMI C20 C19 SING Y N 23 UMI N12 C30 SING N N 24 UMI N12 C5 SING N N 25 UMI C9 C16 SING Y N 26 UMI C9 C10 DOUB Y N 27 UMI C16 C12 DOUB Y N 28 UMI C19 C18 DOUB Y N 29 UMI C5 C6 DOUB Y N 30 UMI C5 C4 SING Y N 31 UMI C6 C1 SING Y N 32 UMI C10 N11 SING Y N 33 UMI C12 C18 SING Y N 34 UMI C12 N11 SING Y N 35 UMI C4 C3 DOUB Y N 36 UMI C1 C2 DOUB Y N 37 UMI C3 C2 SING Y N 38 UMI C3 N8 SING N N 39 UMI C2 C7 SING N N 40 UMI O11 N8 SING N N 41 UMI N8 O10 SING N N 42 UMI O9 C7 SING N N 43 UMI C1 H1 SING N N 44 UMI C10 H2 SING N N 45 UMI C14 H3 SING N N 46 UMI C14 H4 SING N N 47 UMI C15 H5 SING N N 48 UMI C15 H6 SING N N 49 UMI C17 H7 SING N N 50 UMI C17 H8 SING N N 51 UMI C18 H9 SING N N 52 UMI C19 H10 SING N N 53 UMI C20 H11 SING N N 54 UMI C21 H12 SING N N 55 UMI C22 H13 SING N N 56 UMI C22 H14 SING N N 57 UMI C24 H15 SING N N 58 UMI C25 H16 SING N N 59 UMI C26 H17 SING N N 60 UMI C28 H18 SING N N 61 UMI C30 H19 SING N N 62 UMI C30 H20 SING N N 63 UMI C4 H21 SING N N 64 UMI C6 H22 SING N N 65 UMI C7 H23 SING N N 66 UMI C7 H24 SING N N 67 UMI C8 H25 SING N N 68 UMI C8 H26 SING N N 69 UMI N12 H28 SING N N 70 UMI O9 H30 SING N N 71 UMI N11 H27 SING N N 72 UMI O10 H29 SING N N 73 UMI O11 H31 SING N N 74 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UMI SMILES ACDLabs 12.01 "FC(F)(F)c1cccc(c1)CC1(CCN(Cc2c[NH]c3ccccc23)C1)CNc1ccc(CO)c(c1)N(O)O" UMI InChI InChI 1.06 "InChI=1S/C29H31F3N4O3/c30-29(31,32)23-5-3-4-20(12-23)14-28(18-34-24-9-8-21(17-37)27(13-24)36(38)39)10-11-35(19-28)16-22-15-33-26-7-2-1-6-25(22)26/h1-9,12-13,15,33-34,37-39H,10-11,14,16-19H2/t28-/m0/s1" UMI InChIKey InChI 1.06 KGLHSGWEBHLIGL-NDEPHWFRSA-N UMI SMILES_CANONICAL CACTVS 3.385 "OCc1ccc(NC[C@]2(CCN(Cc3c[nH]c4ccccc34)C2)Cc5cccc(c5)C(F)(F)F)cc1N(O)O" UMI SMILES CACTVS 3.385 "OCc1ccc(NC[C]2(CCN(Cc3c[nH]c4ccccc34)C2)Cc5cccc(c5)C(F)(F)F)cc1N(O)O" UMI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CN3CC[C@](C3)(Cc4cccc(c4)C(F)(F)F)CNc5ccc(c(c5)N(O)O)CO" UMI SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CN3CCC(C3)(Cc4cccc(c4)C(F)(F)F)CNc5ccc(c(c5)N(O)O)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UMI "SYSTEMATIC NAME" ACDLabs 12.01 "[2-(dihydroxyamino)-4-({[(3R)-1-[(1H-indol-3-yl)methyl]-3-{[3-(trifluoromethyl)phenyl]methyl}pyrrolidin-3-yl]methyl}amino)phenyl]methanol" UMI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[2-[bis(oxidanyl)amino]-4-[[(3~{R})-1-(1~{H}-indol-3-ylmethyl)-3-[[3-(trifluoromethyl)phenyl]methyl]pyrrolidin-3-yl]methylamino]phenyl]methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UMI "Create component" 2022-08-23 RCSB UMI "Initial release" 2023-07-26 RCSB #