data_UO5 # _chem_comp.id UO5 _chem_comp.name "6-[5-chloranyl-2-(oxan-4-ylamino)pyrimidin-4-yl]-2-[2-oxidanylidene-2-(1,2,4,5-tetrahydro-3-benzazepin-3-yl)ethyl]-3~{H}-isoindol-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H30 Cl N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-03-02 _chem_comp.pdbx_modified_date 2021-10-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 532.033 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UO5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7NR3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UO5 C2 C1 C 0 1 Y N N 10.063 6.276 44.967 4.549 -2.156 0.687 C2 UO5 1 UO5 C3 C2 C 0 1 Y N N 11.316 5.763 44.692 5.848 -1.763 0.965 C3 UO5 2 UO5 N4 N1 N 0 1 Y N N 12.176 6.402 43.909 6.271 -0.583 0.542 N4 UO5 3 UO5 C5 C3 C 0 1 Y N N 11.735 7.570 43.397 5.471 0.225 -0.140 C5 UO5 4 UO5 C7 C4 C 0 1 N N N 12.364 9.556 42.071 7.330 1.844 -0.252 C7 UO5 5 UO5 C8 C5 C 0 1 N N N 13.694 10.264 41.831 7.812 2.872 -1.280 C8 UO5 6 UO5 C11 C6 C 0 1 N N N 11.473 10.858 40.112 8.814 2.946 1.426 C11 UO5 7 UO5 C12 C7 C 0 1 N N N 11.552 9.492 40.775 7.386 2.469 1.146 C12 UO5 8 UO5 C14 C8 C 0 1 Y N N 9.663 7.487 44.402 3.731 -1.286 -0.038 C14 UO5 9 UO5 C15 C9 C 0 1 Y N N 8.352 8.164 44.611 2.334 -1.661 -0.365 C15 UO5 10 UO5 C16 C10 C 0 1 Y N N 8.271 9.554 44.530 2.016 -2.992 -0.637 C16 UO5 11 UO5 C19 C11 C 0 1 N N N 4.514 9.971 45.238 -1.750 -2.436 -1.270 C19 UO5 12 UO5 C21 C12 C 0 1 N N N 2.430 8.669 45.907 -3.629 -0.628 -1.343 C21 UO5 13 UO5 C22 C13 C 0 1 N N N 2.328 8.938 47.403 -4.367 -0.698 -0.031 C22 UO5 14 UO5 C25 C14 C 0 1 N N N 1.153 9.831 49.376 -6.349 -0.428 1.318 C25 UO5 15 UO5 C26 C15 C 0 1 N N N 1.647 11.227 49.760 -6.756 0.976 1.778 C26 UO5 16 UO5 C27 C16 C 0 1 Y N N 2.374 11.962 48.662 -8.034 1.366 1.068 C27 UO5 17 UO5 C28 C17 C 0 1 Y N N 3.696 12.363 48.837 -9.216 1.438 1.784 C28 UO5 18 UO5 C31 C18 C 0 1 Y N N 2.435 12.894 46.441 -9.191 2.003 -0.924 C31 UO5 19 UO5 C35 C19 C 0 1 N N N 4.614 7.616 45.360 -1.215 -0.261 -0.811 C35 UO5 20 UO5 C37 C20 C 0 1 Y N N 5.976 8.120 45.063 0.030 -1.046 -0.703 C37 UO5 21 UO5 C38 C21 C 0 1 Y N N 7.174 7.445 44.872 1.341 -0.687 -0.395 C38 UO5 22 UO5 CL1 CL1 CL 0 0 N N N 9.018 5.391 46.023 3.953 -3.697 1.222 CL1 UO5 23 UO5 N6 N2 N 0 1 N N N 12.585 8.231 42.603 5.952 1.454 -0.559 N6 UO5 24 UO5 C9 C22 C 0 1 N N N 13.476 11.585 41.115 9.224 3.333 -0.906 C9 UO5 25 UO5 O10 O1 O 0 1 N N N 12.782 11.395 39.871 9.211 3.877 0.415 O10 UO5 26 UO5 N13 N3 N 0 1 Y N N 10.521 8.131 43.615 4.224 -0.111 -0.426 N13 UO5 27 UO5 C17 C23 C 0 1 Y N N 7.069 10.212 44.725 0.714 -3.344 -0.942 C17 UO5 28 UO5 C18 C24 C 0 1 Y N N 5.921 9.500 44.997 -0.271 -2.384 -0.979 C18 UO5 29 UO5 N20 N4 N 0 1 N N N 3.808 8.713 45.447 -2.243 -1.059 -1.146 N20 UO5 30 UO5 O23 O2 O 0 1 N N N 3.245 8.592 48.115 -3.793 -1.072 0.969 O23 UO5 31 UO5 N24 N5 N 0 1 N N N 1.211 9.570 47.934 -5.667 -0.346 0.030 N24 UO5 32 UO5 C29 C25 C 0 1 Y N N 4.370 13.024 47.832 -10.387 1.793 1.140 C29 UO5 33 UO5 C30 C26 C 0 1 Y N N 3.738 13.291 46.635 -10.375 2.076 -0.213 C30 UO5 34 UO5 C32 C27 C 0 1 Y N N 1.735 12.235 47.448 -8.021 1.647 -0.275 C32 UO5 35 UO5 C33 C28 C 0 1 N N N 0.317 11.779 47.214 -6.730 1.571 -1.059 C33 UO5 36 UO5 C34 C29 C 0 1 N N N 0.202 10.259 47.126 -6.325 0.099 -1.195 C34 UO5 37 UO5 O36 O3 O 0 1 N N N 4.242 6.456 45.507 -1.296 0.939 -0.633 O36 UO5 38 UO5 H39 H1 H 0 1 N N N 11.603 4.817 45.126 6.508 -2.413 1.520 H39 UO5 39 UO5 H41 H2 H 0 1 N N N 11.791 10.146 42.802 7.974 0.966 -0.285 H41 UO5 40 UO5 H42 H3 H 0 1 N N N 14.339 9.621 41.214 7.828 2.417 -2.270 H42 UO5 41 UO5 H43 H4 H 0 1 N N N 14.182 10.454 42.798 7.138 3.728 -1.284 H43 UO5 42 UO5 H47 H5 H 0 1 N N N 10.919 11.544 40.769 8.851 3.430 2.402 H47 UO5 43 UO5 H46 H6 H 0 1 N N N 10.943 10.761 39.153 9.491 2.091 1.418 H46 UO5 44 UO5 H48 H7 H 0 1 N N N 10.534 9.145 41.005 6.703 3.317 1.193 H48 UO5 45 UO5 H49 H8 H 0 1 N N N 12.033 8.784 40.084 7.098 1.726 1.889 H49 UO5 46 UO5 H50 H9 H 0 1 N N N 9.161 10.126 44.312 2.787 -3.747 -0.609 H50 UO5 47 UO5 H53 H10 H 0 1 N N N 4.455 10.616 46.127 -1.920 -2.805 -2.282 H53 UO5 48 UO5 H52 H11 H 0 1 N N N 4.118 10.512 44.366 -2.252 -3.079 -0.548 H52 UO5 49 UO5 H55 H12 H 0 1 N N N 1.849 9.431 45.367 -4.113 -1.281 -2.068 H55 UO5 50 UO5 H54 H13 H 0 1 N N N 2.015 7.673 45.695 -3.641 0.397 -1.712 H54 UO5 51 UO5 H57 H14 H 0 1 N N N 0.109 9.727 49.708 -5.679 -0.870 2.056 H57 UO5 52 UO5 H56 H15 H 0 1 N N N 1.778 9.086 49.891 -7.239 -1.049 1.218 H56 UO5 53 UO5 H58 H16 H 0 1 N N N 2.331 11.125 50.615 -6.923 0.975 2.855 H58 UO5 54 UO5 H59 H17 H 0 1 N N N 0.776 11.829 50.057 -5.967 1.686 1.531 H59 UO5 55 UO5 H60 H18 H 0 1 N N N 4.199 12.154 49.770 -9.224 1.216 2.841 H60 UO5 56 UO5 H63 H19 H 0 1 N N N 1.950 13.096 45.497 -9.179 2.223 -1.981 H63 UO5 57 UO5 H68 H20 H 0 1 N N N 7.200 6.367 44.924 1.585 0.343 -0.180 H68 UO5 58 UO5 H40 H21 H 0 1 N N N 12.717 7.642 41.805 5.376 2.056 -1.056 H40 UO5 59 UO5 H44 H22 H 0 1 N N N 14.453 12.049 40.913 9.905 2.483 -0.943 H44 UO5 60 UO5 H45 H23 H 0 1 N N N 12.881 12.248 41.760 9.555 4.096 -1.611 H45 UO5 61 UO5 H51 H24 H 0 1 N N N 7.031 11.290 44.664 0.470 -4.375 -1.152 H51 UO5 62 UO5 H61 H25 H 0 1 N N N 5.394 13.333 47.982 -11.312 1.850 1.695 H61 UO5 63 UO5 H62 H26 H 0 1 N N N 4.266 13.812 45.850 -11.290 2.354 -0.715 H62 UO5 64 UO5 H64 H27 H 0 1 N N N -0.044 12.216 46.271 -6.877 2.002 -2.049 H64 UO5 65 UO5 H65 H28 H 0 1 N N N -0.310 12.133 48.046 -5.950 2.120 -0.532 H65 UO5 66 UO5 H66 H29 H 0 1 N N N -0.796 9.960 47.479 -5.640 -0.013 -2.035 H66 UO5 67 UO5 H67 H30 H 0 1 N N N 0.325 9.957 46.076 -7.214 -0.507 -1.370 H67 UO5 68 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UO5 O10 C11 SING N N 1 UO5 O10 C9 SING N N 2 UO5 C11 C12 SING N N 3 UO5 C12 C7 SING N N 4 UO5 C9 C8 SING N N 5 UO5 C8 C7 SING N N 6 UO5 C7 N6 SING N N 7 UO5 N6 C5 SING N N 8 UO5 C5 N13 DOUB Y N 9 UO5 C5 N4 SING Y N 10 UO5 N13 C14 SING Y N 11 UO5 N4 C3 DOUB Y N 12 UO5 C14 C15 SING N N 13 UO5 C14 C2 DOUB Y N 14 UO5 C16 C15 DOUB Y N 15 UO5 C16 C17 SING Y N 16 UO5 C15 C38 SING Y N 17 UO5 C3 C2 SING Y N 18 UO5 C17 C18 DOUB Y N 19 UO5 C38 C37 DOUB Y N 20 UO5 C2 CL1 SING N N 21 UO5 C18 C37 SING Y N 22 UO5 C18 C19 SING N N 23 UO5 C37 C35 SING N N 24 UO5 C19 N20 SING N N 25 UO5 C35 N20 SING N N 26 UO5 C35 O36 DOUB N N 27 UO5 N20 C21 SING N N 28 UO5 C21 C22 SING N N 29 UO5 C31 C30 DOUB Y N 30 UO5 C31 C32 SING Y N 31 UO5 C30 C29 SING Y N 32 UO5 C34 C33 SING N N 33 UO5 C34 N24 SING N N 34 UO5 C33 C32 SING N N 35 UO5 C22 N24 SING N N 36 UO5 C22 O23 DOUB N N 37 UO5 C32 C27 DOUB Y N 38 UO5 C29 C28 DOUB Y N 39 UO5 N24 C25 SING N N 40 UO5 C27 C28 SING Y N 41 UO5 C27 C26 SING N N 42 UO5 C25 C26 SING N N 43 UO5 C3 H39 SING N N 44 UO5 C7 H41 SING N N 45 UO5 C8 H42 SING N N 46 UO5 C8 H43 SING N N 47 UO5 C11 H47 SING N N 48 UO5 C11 H46 SING N N 49 UO5 C12 H48 SING N N 50 UO5 C12 H49 SING N N 51 UO5 C16 H50 SING N N 52 UO5 C19 H53 SING N N 53 UO5 C19 H52 SING N N 54 UO5 C21 H55 SING N N 55 UO5 C21 H54 SING N N 56 UO5 C25 H57 SING N N 57 UO5 C25 H56 SING N N 58 UO5 C26 H58 SING N N 59 UO5 C26 H59 SING N N 60 UO5 C28 H60 SING N N 61 UO5 C31 H63 SING N N 62 UO5 C38 H68 SING N N 63 UO5 N6 H40 SING N N 64 UO5 C9 H44 SING N N 65 UO5 C9 H45 SING N N 66 UO5 C17 H51 SING N N 67 UO5 C29 H61 SING N N 68 UO5 C30 H62 SING N N 69 UO5 C33 H64 SING N N 70 UO5 C33 H65 SING N N 71 UO5 C34 H66 SING N N 72 UO5 C34 H67 SING N N 73 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UO5 InChI InChI 1.03 "InChI=1S/C29H30ClN5O3/c30-25-16-31-29(32-23-9-13-38-14-10-23)33-27(25)21-5-6-22-17-35(28(37)24(22)15-21)18-26(36)34-11-7-19-3-1-2-4-20(19)8-12-34/h1-6,15-16,23H,7-14,17-18H2,(H,31,32,33)" UO5 InChIKey InChI 1.03 CDIPSADLEIZARJ-UHFFFAOYSA-N UO5 SMILES_CANONICAL CACTVS 3.385 "Clc1cnc(NC2CCOCC2)nc1c3ccc4CN(CC(=O)N5CCc6ccccc6CC5)C(=O)c4c3" UO5 SMILES CACTVS 3.385 "Clc1cnc(NC2CCOCC2)nc1c3ccc4CN(CC(=O)N5CCc6ccccc6CC5)C(=O)c4c3" UO5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)CCN(CC2)C(=O)CN3Cc4ccc(cc4C3=O)c5c(cnc(n5)NC6CCOCC6)Cl" UO5 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)CCN(CC2)C(=O)CN3Cc4ccc(cc4C3=O)c5c(cnc(n5)NC6CCOCC6)Cl" # _pdbx_chem_comp_identifier.comp_id UO5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "6-[5-chloranyl-2-(oxan-4-ylamino)pyrimidin-4-yl]-2-[2-oxidanylidene-2-(1,2,4,5-tetrahydro-3-benzazepin-3-yl)ethyl]-3~{H}-isoindol-1-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UO5 "Create component" 2021-03-02 PDBE UO5 "Initial release" 2021-10-06 RCSB ##