data_UO9 # _chem_comp.id UO9 _chem_comp.name "(2~{S})-2-[[(2~{S})-4-methyl-2-[[2-methyl-2-[oxidanyl(phenyl)-$l^{3}-sulfanyl]propoxy]carbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H37 N3 O9 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-23 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 575.695 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UO9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8E5X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UO9 C5 C1 C 0 1 N N N N N N 15.213 22.049 28.927 -2.993 3.250 2.775 C5 UO9 1 UO9 C10 C2 C 0 1 N N S N N N 7.323 21.057 25.941 -5.354 1.547 -0.752 C10 UO9 2 UO9 C1 C3 C 0 1 N N N N N N 10.961 24.004 25.792 1.328 0.247 0.828 C1 UO9 3 UO9 C2 C4 C 0 1 N N S N N N 11.762 22.119 27.096 -1.097 0.473 0.906 C2 UO9 4 UO9 C3 C5 C 0 1 N N N N N N 12.841 21.807 28.131 -1.378 1.872 1.458 C3 UO9 5 UO9 C4 C6 C 0 1 N N N N N N 14.263 22.207 27.739 -2.617 1.828 2.355 C4 UO9 6 UO9 C6 C7 C 0 1 N N N N N N 14.752 21.399 26.549 -2.315 0.991 3.600 C6 UO9 7 UO9 C7 C8 C 0 1 N N N N N N 10.406 21.622 27.601 -2.210 0.067 -0.025 C7 UO9 8 UO9 C8 C9 C 0 1 N N S N N N 8.766 19.791 27.628 -4.466 -0.764 -0.421 C8 UO9 9 UO9 C14 C10 C 0 1 N N R N N N 8.987 18.432 28.254 -3.977 -2.028 -1.133 C14 UO9 10 UO9 C13 C11 C 0 1 N N N N N N 6.509 21.860 26.952 -6.712 1.226 -0.085 C13 UO9 11 UO9 C12 C12 C 0 1 N N N N N N 5.431 22.557 26.124 -7.489 2.543 -0.301 C12 UO9 12 UO9 C11 C13 C 0 1 N N N N N N 6.404 20.948 24.737 -5.682 2.629 -1.757 C11 UO9 13 UO9 C9 C14 C 0 1 N N N N N N 7.816 19.698 26.435 -4.798 0.310 -1.459 C9 UO9 14 UO9 C15 C15 C 0 1 N N N N N N 9.810 25.883 24.981 3.706 0.086 0.944 C15 UO9 15 UO9 C16 C16 C 0 1 N N N N N N 10.160 27.334 24.651 4.932 0.257 0.044 C16 UO9 16 UO9 C17 C17 C 0 1 N N N N N N 9.383 27.764 23.403 4.844 -0.722 -1.128 C17 UO9 17 UO9 C19 C18 C 0 1 Y N N N N N 10.567 29.847 25.885 7.720 0.165 -0.181 C19 UO9 18 UO9 O3 O1 O 0 1 N N N N N N 9.722 18.537 29.458 -4.989 -2.491 -2.029 O3 UO9 19 UO9 O1 O2 O 0 1 N N N N N N 10.428 23.310 24.956 1.310 -0.063 2.003 O1 UO9 20 UO9 C20 C19 C 0 1 Y N N N N N 10.052 30.945 25.226 8.156 -0.895 -0.955 C20 UO9 21 UO9 C22 C20 C 0 1 Y N N N N N 12.117 32.115 25.569 9.735 0.545 -2.036 C22 UO9 22 UO9 C18 C21 C 0 1 N N N N N N 11.674 27.437 24.437 4.976 1.690 -0.490 C18 UO9 23 UO9 C21 C22 C 0 1 Y N N N N N 10.832 32.081 25.074 9.164 -0.704 -1.882 C21 UO9 24 UO9 C23 C23 C 0 1 Y N N N N N 12.631 31.015 26.220 9.294 1.606 -1.267 C23 UO9 25 UO9 C24 C24 C 0 1 Y N N N N N 11.858 29.875 26.379 8.286 1.416 -0.339 C24 UO9 26 UO9 N1 N1 N 0 1 N N N N N N 11.741 23.542 26.784 0.172 0.482 0.175 N1 UO9 27 UO9 N2 N2 N 0 1 N N N N N N 10.050 20.382 27.250 -3.416 -0.271 0.474 N2 UO9 28 UO9 N3 N3 N 0 1 N N N N N N 5.364 21.751 24.909 -6.884 3.165 -1.484 N3 UO9 29 UO9 O2 O3 O 0 1 N N N N N N 6.612 20.243 23.735 -4.964 2.964 -2.676 O2 UO9 30 UO9 O4 O4 O 0 1 N N N N N N 9.694 22.351 28.294 -2.021 0.045 -1.222 O4 UO9 31 UO9 O5 O5 O 0 1 N N N N N N 10.815 25.336 25.875 2.502 0.354 0.178 O5 UO9 32 UO9 O6 O6 O 0 1 N N N N N N 10.063 27.682 27.319 6.519 -1.468 1.282 O6 UO9 33 UO9 S1 S1 S 0 1 N N S N N N 9.569 28.366 26.078 6.436 -0.078 1.001 S1 UO9 34 UO9 H1 H1 H 0 1 N N N N N N 14.841 22.641 29.776 -3.208 3.846 1.888 H1 UO9 35 UO9 H2 H2 H 0 1 N N N N N N 15.267 20.989 29.215 -3.876 3.218 3.414 H2 UO9 36 UO9 H3 H3 H 0 1 N N N N N N 16.215 22.403 28.644 -2.164 3.699 3.322 H3 UO9 37 UO9 H4 H4 H 0 1 N N N N N N 8.200 21.656 25.653 -4.643 1.914 -0.012 H4 UO9 38 UO9 H5 H5 H 0 1 N N N N N N 12.004 21.561 26.180 -1.036 -0.237 1.731 H5 UO9 39 UO9 H6 H6 H 0 1 N N N N N N 12.583 22.337 29.060 -0.521 2.213 2.039 H6 UO9 40 UO9 H7 H7 H 0 1 N N N N N N 12.832 20.722 28.314 -1.553 2.560 0.631 H7 UO9 41 UO9 H8 H8 H 0 1 N N N N N N 14.251 23.269 27.451 -3.446 1.379 1.808 H8 UO9 42 UO9 H9 H9 H 0 1 N N N N N N 15.776 21.708 26.291 -3.218 0.898 4.203 H9 UO9 43 UO9 H10 H10 H 0 1 N N N N N N 14.746 20.329 26.805 -1.976 0.000 3.298 H10 UO9 44 UO9 H11 H11 H 0 1 N N N N N N 14.088 21.574 25.689 -1.536 1.479 4.185 H11 UO9 45 UO9 H12 H12 H 0 1 N N N N N N 8.293 20.437 28.382 -5.359 -0.997 0.160 H12 UO9 46 UO9 H13 H13 H 0 1 N N N N N N 7.983 18.285 28.678 -3.071 -1.801 -1.694 H13 UO9 47 UO9 H15 H15 H 0 1 N N N N N N 6.053 21.193 27.699 -7.206 0.395 -0.588 H15 UO9 48 UO9 H16 H16 H 0 1 N N N N N N 7.145 22.600 27.461 -6.585 1.016 0.977 H16 UO9 49 UO9 H17 H17 H 0 1 N N N N N N 5.720 23.593 25.894 -8.543 2.335 -0.481 H17 UO9 50 UO9 H18 H18 H 0 1 N N N N N N 4.466 22.554 26.652 -7.377 3.194 0.567 H18 UO9 51 UO9 H19 H19 H 0 1 N N N N N N 6.943 19.098 26.731 -5.543 -0.076 -2.155 H19 UO9 52 UO9 H20 H20 H 0 1 N N N N N N 8.342 19.197 25.609 -3.894 0.578 -2.006 H20 UO9 53 UO9 H21 H21 H 0 1 N N N N N N 8.825 25.845 25.469 3.675 -0.935 1.325 H21 UO9 54 UO9 H22 H22 H 0 1 N N N N N N 9.783 25.292 24.054 3.769 0.784 1.779 H22 UO9 55 UO9 H23 H23 H 0 1 N N N N N N 8.303 27.677 23.594 3.940 -0.521 -1.703 H23 UO9 56 UO9 H24 H24 H 0 1 N N N N N N 9.629 28.808 23.160 5.717 -0.600 -1.770 H24 UO9 57 UO9 H25 H25 H 0 1 N N N N N N 9.659 27.116 22.558 4.813 -1.743 -0.748 H25 UO9 58 UO9 H26 H26 H 0 1 N N N N N N 9.847 17.672 29.830 -5.230 -1.852 -2.714 H26 UO9 59 UO9 H27 H27 H 0 1 N N N N N N 9.047 30.919 24.831 7.711 -1.871 -0.834 H27 UO9 60 UO9 H28 H28 H 0 1 N N N N N N 12.720 33.002 25.447 10.522 0.694 -2.760 H28 UO9 61 UO9 H29 H29 H 0 1 N N N N N N 12.197 27.121 25.352 5.038 2.388 0.345 H29 UO9 62 UO9 H30 H30 H 0 1 N N N N N N 11.971 26.786 23.602 5.849 1.812 -1.132 H30 UO9 63 UO9 H31 H31 H 0 1 N N N N N N 11.941 28.478 24.203 4.072 1.892 -1.065 H31 UO9 64 UO9 H32 H32 H 0 1 N N N N N N 10.430 32.944 24.565 9.506 -1.532 -2.486 H32 UO9 65 UO9 H33 H33 H 0 1 N N N N N N 13.639 31.041 26.608 9.736 2.583 -1.390 H33 UO9 66 UO9 H34 H34 H 0 1 N N N N N N 12.263 29.012 26.887 7.942 2.244 0.262 H34 UO9 67 UO9 H35 H35 H 0 1 N N N N N N 12.308 24.176 27.309 0.181 0.658 -0.779 H35 UO9 68 UO9 H36 H36 H 0 1 N N N N N N 10.688 19.836 26.707 -3.589 -0.187 1.424 H36 UO9 69 UO9 H37 H37 H 0 1 N N N N N N 4.601 21.800 24.264 -7.298 3.873 -2.003 H37 UO9 70 UO9 S2 S2 S 0 1 N Y N N N N ? ? ? -3.622 -3.315 0.095 S2 UO9 71 UO9 O7 O7 O 0 1 N Y N N N N ? ? ? -4.728 -3.486 0.972 O7 UO9 72 UO9 O8 O8 O 0 1 N Y N N N N ? ? ? -2.995 -4.431 -0.520 O8 UO9 73 UO9 O9 O9 O 0 1 N Y N N N N ? ? ? -2.536 -2.711 0.975 O9 UO9 74 UO9 H14 H14 H 0 1 N Y N N N N ? ? ? -2.239 -3.293 1.688 H14 UO9 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UO9 C17 C16 SING N N 1 UO9 O2 C11 DOUB N N 2 UO9 C18 C16 SING N N 3 UO9 C16 C15 SING N N 4 UO9 C16 S1 SING N N 5 UO9 C11 N3 SING N N 6 UO9 C11 C10 SING N N 7 UO9 N3 C12 SING N N 8 UO9 O1 C1 DOUB N N 9 UO9 C15 O5 SING N N 10 UO9 C21 C20 DOUB Y N 11 UO9 C21 C22 SING Y N 12 UO9 C20 C19 SING Y N 13 UO9 C22 C23 DOUB Y N 14 UO9 C1 O5 SING N N 15 UO9 C1 N1 SING N N 16 UO9 C19 S1 SING N N 17 UO9 C19 C24 DOUB Y N 18 UO9 C10 C9 SING N N 19 UO9 C10 C13 SING N N 20 UO9 S1 O6 DOUB N N 21 UO9 C12 C13 SING N N 22 UO9 C23 C24 SING Y N 23 UO9 C9 C8 SING N N 24 UO9 C6 C4 SING N N 25 UO9 N1 C2 SING N N 26 UO9 C2 C7 SING N N 27 UO9 C2 C3 SING N N 28 UO9 N2 C7 SING N N 29 UO9 N2 C8 SING N N 30 UO9 C7 O4 DOUB N N 31 UO9 C8 C14 SING N N 32 UO9 C4 C3 SING N N 33 UO9 C4 C5 SING N N 34 UO9 C14 O3 SING N N 35 UO9 C5 H1 SING N N 36 UO9 C5 H2 SING N N 37 UO9 C5 H3 SING N N 38 UO9 C10 H4 SING N N 39 UO9 C2 H5 SING N N 40 UO9 C3 H6 SING N N 41 UO9 C3 H7 SING N N 42 UO9 C4 H8 SING N N 43 UO9 C6 H9 SING N N 44 UO9 C6 H10 SING N N 45 UO9 C6 H11 SING N N 46 UO9 C8 H12 SING N N 47 UO9 C14 H13 SING N N 48 UO9 C13 H15 SING N N 49 UO9 C13 H16 SING N N 50 UO9 C12 H17 SING N N 51 UO9 C12 H18 SING N N 52 UO9 C9 H19 SING N N 53 UO9 C9 H20 SING N N 54 UO9 C15 H21 SING N N 55 UO9 C15 H22 SING N N 56 UO9 C17 H23 SING N N 57 UO9 C17 H24 SING N N 58 UO9 C17 H25 SING N N 59 UO9 O3 H26 SING N N 60 UO9 C20 H27 SING N N 61 UO9 C22 H28 SING N N 62 UO9 C18 H29 SING N N 63 UO9 C18 H30 SING N N 64 UO9 C18 H31 SING N N 65 UO9 C21 H32 SING N N 66 UO9 C23 H33 SING N N 67 UO9 C24 H34 SING N N 68 UO9 N1 H35 SING N N 69 UO9 N2 H36 SING N N 70 UO9 N3 H37 SING N N 71 UO9 C14 S2 SING N N 72 UO9 S2 O7 DOUB N N 73 UO9 S2 O8 DOUB N N 74 UO9 S2 O9 SING N N 75 UO9 O9 H14 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UO9 SMILES ACDLabs 12.01 "CC(C)CC(NC(=O)OCC(C)(C)S(=O)c1ccccc1)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O" UO9 InChI InChI 1.06 "InChI=1S/C24H37N3O9S2/c1-15(2)12-18(27-23(31)36-14-24(3,4)37(32)17-8-6-5-7-9-17)21(29)26-19(22(30)38(33,34)35)13-16-10-11-25-20(16)28/h5-9,15-16,18-19,22,30H,10-14H2,1-4H3,(H,25,28)(H,26,29)(H,27,31)(H,33,34,35)/t16-,18-,19-,22+,37-/m0/s1" UO9 InChIKey InChI 1.06 SNFBJKJTJOFDKW-NRANLDPGSA-N UO9 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OCC(C)(C)[S@@](=O)c1ccccc1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@H](O)[S](O)(=O)=O" UO9 SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OCC(C)(C)[S](=O)c1ccccc1)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O" UO9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@H](O)S(=O)(=O)O)NC(=O)OCC(C)(C)S(=O)c2ccccc2" UO9 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC(C)(C)S(=O)c2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UO9 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S)-2-{[N-({2-[(S)-benzenesulfinyl]-2-methylpropoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" UO9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-2-[[(2~{S})-4-methyl-2-[[2-methyl-2-(phenylsulfinyl)propoxy]carbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UO9 "Create component" 2022-08-23 RCSB UO9 "Initial release" 2022-09-07 RCSB UO9 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id UO9 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C14 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #