data_UPB # _chem_comp.id UPB _chem_comp.name "3-[5-[(~{Z})-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[(~{Z})-[5-[(~{Z})-[(4~{R})-3-ethyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H36 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-03-16 _chem_comp.pdbx_modified_date 2021-08-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 584.662 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UPB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7E2U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UPB CHA C1 C 0 1 N N N -8.439 -22.349 -20.850 2.261 -0.157 -0.595 CHA UPB 1 UPB NA N1 N 0 1 Y N N -6.349 -22.206 -19.441 0.142 -1.409 -0.329 NA UPB 2 UPB C1A C2 C 0 1 Y N N -7.482 -21.674 -20.260 1.515 -1.328 -0.409 C1A UPB 3 UPB C2A C3 C 0 1 Y N N -7.294 -20.166 -20.251 2.032 -2.618 -0.271 C2A UPB 4 UPB C3A C4 C 0 1 Y N N -6.087 -19.830 -19.481 0.966 -3.482 -0.108 C3A UPB 5 UPB C4A C5 C 0 1 Y N N -5.501 -21.097 -18.979 -0.204 -2.724 -0.145 C4A UPB 6 UPB CMA C6 C 0 1 N N N -5.524 -18.442 -19.210 1.052 -4.975 0.077 CMA UPB 7 UPB CAA C7 C 0 1 N N N -8.208 -19.180 -20.970 3.490 -2.999 -0.297 CAA UPB 8 UPB CBA C8 C 0 1 N N N -7.469 -18.699 -22.226 4.056 -2.947 1.124 CBA UPB 9 UPB CGA C9 C 0 1 N N N -7.463 -19.794 -23.299 5.514 -3.328 1.098 CGA UPB 10 UPB O1A O1 O 0 1 N N N -8.518 -20.437 -23.533 6.221 -3.352 2.238 O1A UPB 11 UPB O2A O2 O 0 1 N N N -6.410 -20.049 -23.950 6.045 -3.612 0.051 O2A UPB 12 UPB CHB C10 C 0 1 N N N -4.253 -21.216 -18.127 -1.515 -3.222 -0.010 CHB UPB 13 UPB NB N2 N 0 1 N N N -4.685 -23.661 -17.557 -2.483 -1.385 -1.334 NB UPB 14 UPB C1B C11 C 0 1 N N N -3.859 -22.389 -17.685 -2.581 -2.514 -0.532 C1B UPB 15 UPB C2B C12 C 0 1 N N N -2.494 -22.731 -17.206 -3.940 -2.821 -0.337 C2B UPB 16 UPB C3B C13 C 0 1 N N N -2.442 -24.100 -16.811 -4.682 -1.875 -1.023 C3B UPB 17 UPB C4B C14 C 0 1 N N N -3.771 -24.741 -16.986 -3.720 -0.962 -1.656 C4B UPB 18 UPB CMB C15 C 0 1 N N N -1.355 -21.724 -17.166 -4.487 -3.969 0.471 CMB UPB 19 UPB OB O3 O 0 1 N N N -4.069 -25.867 -16.756 -3.993 0.006 -2.343 OB UPB 20 UPB CAB C16 C 0 1 N N N -1.228 -24.840 -16.260 -6.150 -1.799 -1.103 CAB UPB 21 UPB CBB C17 C 0 1 N N N -0.036 -24.659 -16.797 -6.728 -0.856 -1.842 CBB UPB 22 UPB NC N3 N 0 1 N N N -4.982 -26.128 -20.078 -2.015 1.133 1.223 NC UPB 23 UPB C1C C18 C 0 1 N N N -3.666 -26.511 -19.596 -3.147 0.642 1.748 C1C UPB 24 UPB C2C C19 C 0 1 N N R -3.736 -27.921 -19.065 -4.141 1.771 1.897 C2C UPB 25 UPB C3C C20 C 0 1 N N N -5.141 -28.403 -19.275 -3.410 2.993 1.375 C3C UPB 26 UPB C4C C21 C 0 1 N N N -5.927 -27.212 -19.896 -2.085 2.493 0.975 C4C UPB 27 UPB CMC C22 C 0 1 N N N -2.746 -28.791 -19.859 -5.391 1.495 1.058 CMC UPB 28 UPB OC O4 O 0 1 N N N -2.701 -25.820 -19.627 -3.341 -0.515 2.055 OC UPB 29 UPB CAC C23 C 0 1 N N N -5.514 -29.671 -19.136 -3.866 4.242 1.295 CAC UPB 30 UPB CBC C24 C 0 1 N N N -6.974 -30.112 -19.122 -2.985 5.332 0.743 CBC UPB 31 UPB CHD C25 C 0 1 N N N -7.188 -27.208 -20.265 -1.085 3.249 0.446 CHD UPB 32 UPB ND N4 N 0 1 N N N -7.533 -24.811 -20.378 0.405 1.310 0.009 ND UPB 33 UPB C1D C26 C 0 1 N N N -8.018 -26.030 -20.776 0.162 2.616 0.018 C1D UPB 34 UPB C2D C27 C 0 1 N N N -9.145 -25.819 -21.511 1.313 3.294 -0.456 C2D UPB 35 UPB C3D C28 C 0 1 N N N -9.377 -24.507 -21.584 2.241 2.347 -0.745 C3D UPB 36 UPB C4D C29 C 0 1 N N N -8.384 -23.868 -20.893 1.652 1.091 -0.445 C4D UPB 37 UPB CMD C30 C 0 1 N N N -10.046 -26.860 -22.178 1.475 4.785 -0.611 CMD UPB 38 UPB CAD C31 C 0 1 N N N -10.593 -24.012 -22.370 3.630 2.583 -1.282 CAD UPB 39 UPB CBD C32 C 0 1 N N N -10.212 -23.835 -23.835 4.625 2.624 -0.120 CBD UPB 40 UPB CGD C33 C 0 1 N N N -11.430 -23.379 -24.633 6.013 2.860 -0.656 CGD UPB 41 UPB O1D O5 O 0 1 N N N -12.599 -23.566 -24.190 7.055 2.934 0.187 O1D UPB 42 UPB O2D O6 O 0 1 N N N -11.252 -22.811 -25.741 6.189 2.984 -1.845 O2D UPB 43 UPB H1 H1 H 0 1 N N N -9.267 -21.826 -21.306 3.309 -0.219 -0.851 H1 UPB 44 UPB H3 H3 H 0 1 N N N -6.192 -23.172 -19.238 -0.475 -0.663 -0.389 H3 UPB 45 UPB H4 H4 H 0 1 N N N -5.964 -18.041 -18.285 1.124 -5.206 1.140 H4 UPB 46 UPB H5 H5 H 0 1 N N N -4.431 -18.505 -19.099 0.160 -5.445 -0.337 H5 UPB 47 UPB H6 H6 H 0 1 N N N -5.769 -17.776 -20.051 1.935 -5.354 -0.438 H6 UPB 48 UPB H7 H7 H 0 1 N N N -8.429 -18.325 -20.314 3.595 -4.009 -0.693 H7 UPB 49 UPB H8 H8 H 0 1 N N N -9.147 -19.677 -21.254 4.037 -2.301 -0.932 H8 UPB 50 UPB H9 H9 H 0 1 N N N -6.432 -18.446 -21.961 3.951 -1.937 1.520 H9 UPB 51 UPB H10 H10 H 0 1 N N N -7.974 -17.806 -22.623 3.509 -3.644 1.758 H10 UPB 52 UPB H11 H11 H 0 1 N N N -8.356 -21.072 -24.221 7.153 -3.602 2.172 H11 UPB 53 UPB H12 H12 H 0 1 N N N -3.684 -20.331 -17.882 -1.688 -4.158 0.501 H12 UPB 54 UPB H14 H14 H 0 1 N N N -0.449 -22.210 -16.776 -4.634 -3.650 1.503 H14 UPB 55 UPB H15 H15 H 0 1 N N N -1.161 -21.349 -18.182 -5.441 -4.287 0.050 H15 UPB 56 UPB H16 H16 H 0 1 N N N -1.631 -20.884 -16.512 -3.783 -4.800 0.444 H16 UPB 57 UPB H17 H17 H 0 1 N N N -1.344 -25.516 -15.426 -6.758 -2.509 -0.562 H17 UPB 58 UPB H18 H18 H 0 1 N N N 0.820 -25.186 -16.402 -7.802 -0.742 -1.828 H18 UPB 59 UPB H19 H19 H 0 1 N N N 0.084 -23.984 -17.631 -6.123 -0.204 -2.454 H19 UPB 60 UPB H20 H20 H 0 1 N N N -5.205 -25.240 -20.480 -1.230 0.593 1.039 H20 UPB 61 UPB H21 H21 H 0 1 N N N -3.478 -27.940 -17.996 -4.409 1.907 2.944 H21 UPB 62 UPB H23 H23 H 0 1 N N N -2.784 -29.825 -19.485 -5.903 0.615 1.448 H23 UPB 63 UPB H24 H24 H 0 1 N N N -3.019 -28.777 -20.925 -6.059 2.355 1.107 H24 UPB 64 UPB H25 H25 H 0 1 N N N -1.728 -28.393 -19.736 -5.102 1.319 0.022 H25 UPB 65 UPB H26 H26 H 0 1 N N N -4.748 -30.424 -19.028 -4.868 4.473 1.626 H26 UPB 66 UPB H28 H28 H 0 1 N N N -7.027 -31.203 -18.995 -3.526 6.279 0.756 H28 UPB 67 UPB H29 H29 H 0 1 N N N -7.497 -29.621 -18.289 -2.087 5.419 1.355 H29 UPB 68 UPB H30 H30 H 0 1 N N N -7.451 -29.830 -20.072 -2.704 5.089 -0.282 H30 UPB 69 UPB H31 H31 H 0 1 N N N -7.703 -28.155 -20.199 -1.213 4.316 0.342 H31 UPB 70 UPB H33 H33 H 0 1 N N N -9.653 -27.868 -21.978 0.558 5.284 -0.298 H33 UPB 71 UPB H34 H34 H 0 1 N N N -11.065 -26.777 -21.772 2.305 5.126 0.008 H34 UPB 72 UPB H35 H35 H 0 1 N N N -10.068 -26.684 -23.264 1.679 5.021 -1.655 H35 UPB 73 UPB H36 H36 H 0 1 N N N -10.928 -23.048 -21.959 3.898 1.776 -1.962 H36 UPB 74 UPB H37 H37 H 0 1 N N N -11.407 -24.748 -22.289 3.656 3.533 -1.816 H37 UPB 75 UPB H38 H38 H 0 1 N N N -9.850 -24.793 -24.237 4.356 3.432 0.561 H38 UPB 76 UPB H39 H39 H 0 1 N N N -9.417 -23.079 -23.917 4.598 1.674 0.414 H39 UPB 77 UPB H40 H40 H 0 1 N N N -13.232 -23.222 -24.809 7.926 3.087 -0.204 H40 UPB 78 UPB H2 H2 H 0 1 N N N -5.649 -23.769 -17.802 -1.654 -0.965 -1.614 H2 UPB 79 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UPB O2D CGD DOUB N N 1 UPB CGD O1D SING N N 2 UPB CGD CBD SING N N 3 UPB O2A CGA DOUB N N 4 UPB CBD CAD SING N N 5 UPB O1A CGA SING N N 6 UPB CGA CBA SING N N 7 UPB CAD C3D SING N N 8 UPB CBA CAA SING N N 9 UPB CMD C2D SING N N 10 UPB C3D C2D DOUB N N 11 UPB C3D C4D SING N N 12 UPB C2D C1D SING N N 13 UPB CAA C2A SING N N 14 UPB C4D CHA DOUB N Z 15 UPB C4D ND SING N N 16 UPB CHA C1A SING N N 17 UPB C1D ND DOUB N N 18 UPB C1D CHD SING N N 19 UPB CHD C4C DOUB N Z 20 UPB C1A C2A DOUB Y N 21 UPB C1A NA SING Y N 22 UPB C2A C3A SING Y N 23 UPB NC C4C SING N N 24 UPB NC C1C SING N N 25 UPB C4C C3C SING N N 26 UPB CMC C2C SING N N 27 UPB OC C1C DOUB N N 28 UPB C1C C2C SING N N 29 UPB C3A CMA SING N N 30 UPB C3A C4A DOUB Y N 31 UPB NA C4A SING Y N 32 UPB C3C CAC DOUB N Z 33 UPB C3C C2C SING N N 34 UPB CAC CBC SING N N 35 UPB C4A CHB SING N N 36 UPB CHB C1B DOUB N Z 37 UPB C1B NB SING N N 38 UPB C1B C2B SING N N 39 UPB NB C4B SING N N 40 UPB C2B CMB SING N N 41 UPB C2B C3B DOUB N N 42 UPB C4B C3B SING N N 43 UPB C4B OB DOUB N N 44 UPB C3B CAB SING N N 45 UPB CBB CAB DOUB N N 46 UPB CHA H1 SING N N 47 UPB NA H3 SING N N 48 UPB CMA H4 SING N N 49 UPB CMA H5 SING N N 50 UPB CMA H6 SING N N 51 UPB CAA H7 SING N N 52 UPB CAA H8 SING N N 53 UPB CBA H9 SING N N 54 UPB CBA H10 SING N N 55 UPB O1A H11 SING N N 56 UPB CHB H12 SING N N 57 UPB CMB H14 SING N N 58 UPB CMB H15 SING N N 59 UPB CMB H16 SING N N 60 UPB CAB H17 SING N N 61 UPB CBB H18 SING N N 62 UPB CBB H19 SING N N 63 UPB NC H20 SING N N 64 UPB C2C H21 SING N N 65 UPB CMC H23 SING N N 66 UPB CMC H24 SING N N 67 UPB CMC H25 SING N N 68 UPB CAC H26 SING N N 69 UPB CBC H28 SING N N 70 UPB CBC H29 SING N N 71 UPB CBC H30 SING N N 72 UPB CHD H31 SING N N 73 UPB CMD H33 SING N N 74 UPB CMD H34 SING N N 75 UPB CMD H35 SING N N 76 UPB CAD H36 SING N N 77 UPB CAD H37 SING N N 78 UPB CBD H38 SING N N 79 UPB CBD H39 SING N N 80 UPB O1D H40 SING N N 81 UPB NB H2 SING N N 82 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UPB InChI InChI 1.03 "InChI=1S/C33H36N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h7-8,13-15,19,34H,2,9-12H2,1,3-6H3,(H,36,43)(H,37,42)(H,38,39)(H,40,41)/b20-7-,26-13-,27-14-,29-15-/t19-/m1/s1" UPB InChIKey InChI 1.03 SNHIGJASYQUMKZ-NSNBCYBJSA-N UPB SMILES_CANONICAL CACTVS 3.385 "C\C=C/1[C@@H](C)C(=O)NC/1=C/C2=N\C(=C/c3[nH]c(\C=C4/NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)C(=C2C)CCC(O)=O" UPB SMILES CACTVS 3.385 "CC=C1[CH](C)C(=O)NC1=CC2=NC(=Cc3[nH]c(C=C4NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)C(=C2C)CCC(O)=O" UPB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C/C=C\1/[C@H](C(=O)N/C1=C\C2=N/C(=C\c3c(c(c([nH]3)/C=C\4/C(=C(C(=O)N4)C=C)C)C)CCC(=O)O)/C(=C2C)CCC(=O)O)C" UPB SMILES "OpenEye OEToolkits" 2.0.7 "CC=C1C(C(=O)NC1=CC2=NC(=Cc3c(c(c([nH]3)C=C4C(=C(C(=O)N4)C=C)C)C)CCC(=O)O)C(=C2C)CCC(=O)O)C" # _pdbx_chem_comp_identifier.comp_id UPB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[5-[(~{Z})-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[(~{Z})-[5-[(~{Z})-[(3~{Z},4~{R})-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UPB "Create component" 2021-03-16 PDBJ UPB "Initial release" 2021-08-25 RCSB ##