data_UPD # _chem_comp.id UPD _chem_comp.name "1-acetyl-N-(6-methoxypyridin-3-yl)piperidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H19 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-26 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 277.319 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UPD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5RHE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UPD N1 N1 N 0 1 N N N N N N 6.726 -0.898 26.150 -0.868 0.155 -0.939 N1 UPD 1 UPD C4 C1 C 0 1 N N N N N N 6.653 -3.641 20.238 5.317 0.421 0.567 C4 UPD 2 UPD C5 C2 C 0 1 N N N N N N 7.041 -2.705 19.110 5.642 1.864 0.856 C5 UPD 3 UPD C6 C3 C 0 1 N N N N N N 7.790 -2.084 21.852 3.845 -1.292 -0.377 C6 UPD 4 UPD C7 C4 C 0 1 N N N N N N 7.025 -1.302 22.926 2.376 -1.456 0.027 C7 UPD 5 UPD C8 C5 C 0 1 Y N N N N N 6.291 -0.099 27.230 -2.203 0.053 -0.525 C8 UPD 6 UPD C10 C6 C 0 1 Y N N N N N 5.231 0.166 29.365 -4.057 -1.233 0.248 C10 UPD 7 UPD C13 C7 C 0 1 Y N N N N N 6.756 1.206 27.364 -3.011 1.179 -0.478 C13 UPD 8 UPD O1 O1 O 0 1 N N N N N N 5.970 -4.633 20.022 6.027 -0.460 1.004 O1 UPD 9 UPD N N2 N 0 1 N N N N N N 7.071 -3.310 21.478 4.237 0.110 -0.177 N UPD 10 UPD C3 C8 C 0 1 N N N N N N 6.820 -4.192 22.625 3.430 1.165 -0.803 C3 UPD 11 UPD C2 C9 C 0 1 N N N N N N 6.007 -3.471 23.697 1.966 0.974 -0.394 C2 UPD 12 UPD C1 C10 C 0 1 N N N N N N 6.745 -2.200 24.140 1.523 -0.448 -0.747 C1 UPD 13 UPD C C11 C 0 1 N N N N N N 5.966 -1.459 25.190 0.074 -0.629 -0.377 C UPD 14 UPD O O2 O 0 1 N N N N N N 4.742 -1.378 25.154 -0.246 -1.480 0.426 O UPD 15 UPD N2 N3 N 0 1 Y N N N N N 6.519 1.981 28.430 -4.269 1.090 -0.089 N2 UPD 16 UPD C11 C12 C 0 1 Y N N N N N 5.789 1.451 29.406 -4.806 -0.064 0.270 C11 UPD 17 UPD O2 O3 O 0 1 N N N N N N 5.574 2.130 30.553 -6.103 -0.105 0.668 O2 UPD 18 UPD C12 C13 C 0 1 N N N N N N 6.117 3.449 30.671 -6.821 1.131 0.669 C12 UPD 19 UPD C9 C14 C 0 1 Y N N N N N 5.493 -0.604 28.247 -2.736 -1.181 -0.160 C9 UPD 20 UPD H1 H1 H 0 1 N N N N N N 7.710 -1.066 26.091 -0.622 0.787 -1.633 H1 UPD 21 UPD H2 H2 H 0 1 N N N N N N 6.619 -3.075 18.164 4.955 2.508 0.307 H2 UPD 22 UPD H3 H3 H 0 1 N N N N N N 6.648 -1.699 19.317 5.541 2.052 1.925 H3 UPD 23 UPD H4 H4 H 0 1 N N N N N N 8.137 -2.661 19.030 6.665 2.075 0.545 H4 UPD 24 UPD H5 H5 H 0 1 N N N N N N 8.782 -2.354 22.243 4.468 -1.938 0.242 H5 UPD 25 UPD H6 H6 H 0 1 N N N N N N 7.907 -1.450 20.961 3.968 -1.562 -1.426 H6 UPD 26 UPD H7 H7 H 0 1 N N N N N N 7.627 -0.438 23.244 2.045 -2.468 -0.207 H7 UPD 27 UPD H8 H8 H 0 1 N N N N N N 6.071 -0.949 22.508 2.271 -1.276 1.097 H8 UPD 28 UPD H9 H9 H 0 1 N N N N N N 4.621 -0.208 30.174 -4.502 -2.173 0.542 H9 UPD 29 UPD H10 H10 H 0 1 N N N N N N 7.345 1.619 26.558 -2.607 2.139 -0.764 H10 UPD 30 UPD H11 H11 H 0 1 N N N N N N 6.262 -5.077 22.284 3.779 2.141 -0.465 H11 UPD 31 UPD H12 H12 H 0 1 N N N N N N 7.782 -4.508 23.054 3.518 1.098 -1.888 H12 UPD 32 UPD H13 H13 H 0 1 N N N N N N 5.023 -3.198 23.288 1.864 1.131 0.679 H13 UPD 33 UPD H14 H14 H 0 1 N N N N N N 5.873 -4.136 24.563 1.342 1.692 -0.928 H14 UPD 34 UPD H15 H15 H 0 1 N N N N N N 7.711 -2.500 24.571 1.648 -0.612 -1.817 H15 UPD 35 UPD H16 H16 H 0 1 N N N N N N 5.858 3.866 31.655 -6.330 1.836 1.341 H16 UPD 36 UPD H17 H17 H 0 1 N N N N N N 7.211 3.405 30.568 -6.837 1.542 -0.340 H17 UPD 37 UPD H18 H18 H 0 1 N N N N N N 5.700 4.089 29.880 -7.842 0.957 1.007 H18 UPD 38 UPD H19 H19 H 0 1 N N N N N N 5.077 -1.597 28.165 -2.132 -2.076 -0.190 H19 UPD 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UPD C5 C4 SING N N 1 UPD O1 C4 DOUB N N 2 UPD C4 N SING N N 3 UPD N C6 SING N N 4 UPD N C3 SING N N 5 UPD C6 C7 SING N N 6 UPD C3 C2 SING N N 7 UPD C7 C1 SING N N 8 UPD C2 C1 SING N N 9 UPD C1 C SING N N 10 UPD O C DOUB N N 11 UPD C N1 SING N N 12 UPD N1 C8 SING N N 13 UPD C8 C13 DOUB Y N 14 UPD C8 C9 SING Y N 15 UPD C13 N2 SING Y N 16 UPD C9 C10 DOUB Y N 17 UPD N2 C11 DOUB Y N 18 UPD C10 C11 SING Y N 19 UPD C11 O2 SING N N 20 UPD O2 C12 SING N N 21 UPD N1 H1 SING N N 22 UPD C5 H2 SING N N 23 UPD C5 H3 SING N N 24 UPD C5 H4 SING N N 25 UPD C6 H5 SING N N 26 UPD C6 H6 SING N N 27 UPD C7 H7 SING N N 28 UPD C7 H8 SING N N 29 UPD C10 H9 SING N N 30 UPD C13 H10 SING N N 31 UPD C3 H11 SING N N 32 UPD C3 H12 SING N N 33 UPD C2 H13 SING N N 34 UPD C2 H14 SING N N 35 UPD C1 H15 SING N N 36 UPD C12 H16 SING N N 37 UPD C12 H17 SING N N 38 UPD C12 H18 SING N N 39 UPD C9 H19 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UPD SMILES ACDLabs 12.01 "N(c1cnc(cc1)OC)C(C2CCN(C(C)=O)CC2)=O" UPD InChI InChI 1.03 "InChI=1S/C14H19N3O3/c1-10(18)17-7-5-11(6-8-17)14(19)16-12-3-4-13(20-2)15-9-12/h3-4,9,11H,5-8H2,1-2H3,(H,16,19)" UPD InChIKey InChI 1.03 ZIGOYOFMTWMITB-UHFFFAOYSA-N UPD SMILES_CANONICAL CACTVS 3.385 "COc1ccc(NC(=O)C2CCN(CC2)C(C)=O)cn1" UPD SMILES CACTVS 3.385 "COc1ccc(NC(=O)C2CCN(CC2)C(C)=O)cn1" UPD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCC(CC1)C(=O)Nc2ccc(nc2)OC" UPD SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCC(CC1)C(=O)Nc2ccc(nc2)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UPD "SYSTEMATIC NAME" ACDLabs 12.01 "1-acetyl-N-(6-methoxypyridin-3-yl)piperidine-4-carboxamide" UPD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-ethanoyl-~{N}-(6-methoxypyridin-3-yl)piperidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UPD "Create component" 2020-05-26 RCSB UPD "Initial release" 2020-06-10 RCSB UPD "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id UPD _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C5 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #