data_UQF # _chem_comp.id UQF _chem_comp.name "1-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[3-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]prop-2-ynyl]amino]propyl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H36 N14 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-06 _chem_comp.pdbx_modified_date 2025-03-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 668.664 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UQF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QG8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UQF N1 N1 N 0 1 N N N N N N 13.113 3.515 9.319 -2.020 3.559 3.679 N1 UQF 1 UQF C7 C1 C 0 1 Y N N N N N 18.409 11.305 12.773 4.479 1.041 -0.960 C7 UQF 2 UQF C8 C2 C 0 1 Y N N N N N 20.268 12.254 12.343 6.602 1.086 -0.492 C8 UQF 3 UQF N2 N2 N 0 1 N N N N N N 12.939 5.646 10.469 -2.035 3.973 1.397 N2 UQF 4 UQF C9 C3 C 0 1 Y N N N N N 20.598 11.082 13.004 6.060 -0.050 0.136 C9 UQF 5 UQF O1 O1 O 0 1 N N N N N N 16.053 7.204 12.944 3.477 -2.564 4.251 O1 UQF 6 UQF C1 C4 C 0 1 N N N N N N 13.242 6.454 11.650 -1.408 2.676 1.134 C1 UQF 7 UQF O5 O2 O 0 1 N N N N N N 17.827 10.173 7.859 -5.686 -0.932 -3.229 O5 UQF 8 UQF C5 C5 C 0 1 N N N N N N 15.850 10.849 12.855 2.156 1.701 -1.940 C5 UQF 9 UQF C6 C6 C 0 1 N N N N N N 17.033 11.008 12.846 3.203 1.404 -1.498 C6 UQF 10 UQF N3 N3 N 0 1 N N N N N N 13.997 9.522 11.934 -0.161 1.088 -2.076 N3 UQF 11 UQF C4 C7 C 0 1 N N N N N N 14.396 10.642 12.784 0.844 2.074 -2.493 C4 UQF 12 UQF O4 O3 O 0 1 N N N N N N 15.702 8.380 9.803 -2.711 -0.161 -1.370 O4 UQF 13 UQF C3 C8 C 0 1 N N N N N N 12.803 8.887 12.512 -0.447 1.202 -0.640 C3 UQF 14 UQF O3 O4 O 0 1 N N N N N N 19.075 9.422 16.126 3.062 -2.506 -1.585 O3 UQF 15 UQF C2 C9 C 0 1 N N N N N N 12.311 7.654 11.767 -1.209 2.502 -0.373 C2 UQF 16 UQF N4 N4 N 0 1 Y N N N N N 18.890 12.390 12.218 5.594 1.709 -1.141 N4 UQF 17 UQF N N5 N 0 1 N N N N N N 14.893 4.313 10.796 -2.903 5.570 2.935 N UQF 18 UQF C C10 C 0 1 N N N N N N 13.632 4.426 10.153 -2.314 4.353 2.688 C UQF 19 UQF O O5 O 0 1 N N N N N N 18.763 8.196 12.824 3.922 -1.369 1.657 O UQF 20 UQF C10 C11 C 0 1 Y N N N N N 22.753 11.435 12.736 8.142 -0.565 0.963 C10 UQF 21 UQF C11 C12 C 0 1 Y N N N N N 21.331 13.031 11.855 7.978 1.335 -0.338 C11 UQF 22 UQF C12 C13 C 0 1 N N R N N N 19.271 9.103 13.790 3.737 -1.051 0.260 C12 UQF 23 UQF C13 C14 C 0 1 N N R N N N 18.403 6.997 13.552 3.283 -2.651 1.843 C13 UQF 24 UQF C14 C15 C 0 1 N N N N N N 17.179 6.345 12.946 3.823 -3.337 3.100 C14 UQF 25 UQF C15 C16 C 0 1 N N S N N N 18.294 7.403 15.034 3.657 -3.464 0.584 C15 UQF 26 UQF C16 C17 C 0 1 N N R N N N 18.367 8.929 14.995 3.962 -2.387 -0.481 C16 UQF 27 UQF C17 C18 C 0 1 N N N N N N 13.900 9.831 10.491 -1.390 1.221 -2.870 C17 UQF 28 UQF C18 C19 C 0 1 N N R N N N 15.265 9.751 9.816 -2.234 -0.047 -2.722 C18 UQF 29 UQF C19 C20 C 0 1 N N R N N N 16.789 8.285 8.905 -4.018 -0.770 -1.435 C19 UQF 30 UQF C20 C21 C 0 1 N N R N N N 16.632 9.402 7.872 -4.670 -0.097 -2.670 C20 UQF 31 UQF C21 C22 C 0 1 N N S N N N 15.391 10.179 8.352 -3.470 0.036 -3.638 C21 UQF 32 UQF C22 C23 C 0 1 Y N N N N N 15.757 6.300 7.709 -4.595 0.583 0.615 C22 UQF 33 UQF C23 C24 C 0 1 Y N N N N N 17.406 4.967 7.592 -6.248 -0.550 1.443 C23 UQF 34 UQF C24 C25 C 0 1 Y N N N N N 17.863 6.091 8.260 -5.831 -1.211 0.276 C24 UQF 35 UQF C25 C26 C 0 1 Y N N N N N 19.905 5.292 8.385 -7.463 -2.795 0.610 C25 UQF 36 UQF C26 C27 C 0 1 Y N N N N N 18.347 3.954 7.330 -7.322 -1.097 2.167 C26 UQF 37 UQF N10 N6 N 0 1 Y N N N N N 16.067 5.109 7.256 -5.456 0.539 1.590 N10 UQF 38 UQF N11 N7 N 0 1 Y N N N N N 19.105 6.311 8.695 -6.461 -2.320 -0.099 N11 UQF 39 UQF N12 N8 N 0 1 Y N N N N N 19.609 4.158 7.751 -7.890 -2.209 1.714 N12 UQF 40 UQF N13 N9 N 0 1 N N N N N N 18.077 2.825 6.645 -7.777 -0.490 3.325 N13 UQF 41 UQF N5 N10 N 0 1 Y N N N N N 21.828 10.621 13.248 6.860 -0.839 0.846 N5 UQF 42 UQF N6 N11 N 0 1 Y N N N N N 22.587 12.579 12.064 8.697 0.489 0.392 N6 UQF 43 UQF N7 N12 N 0 1 N N N N N N 21.164 14.178 11.194 8.569 2.436 -0.932 N7 UQF 44 UQF N8 N13 N 0 1 Y N N N N N 19.399 10.453 13.268 4.722 -0.056 -0.171 N8 UQF 45 UQF N9 N14 N 0 1 Y N N N N N 16.795 6.951 8.323 -4.785 -0.476 -0.222 N9 UQF 46 UQF O2 O6 O 0 1 N N N N N N 19.487 6.991 15.667 2.558 -4.280 0.171 O2 UQF 47 UQF O6 O7 O 0 1 N N N N N N 15.589 11.580 8.177 -3.466 -1.039 -4.581 O6 UQF 48 UQF H6 H1 H 0 1 N N N N N N 12.220 3.795 8.968 -1.604 2.699 3.505 H6 UQF 49 UQF H7 H2 H 0 1 N N N N N N 12.216 5.957 9.852 -2.254 4.564 0.660 H7 UQF 50 UQF H21 H3 H 0 1 N N N N N N 15.312 6.754 12.556 3.788 -2.940 5.085 H21 UQF 51 UQF H9 H4 H 0 1 N N N N N N 13.131 5.828 12.548 -0.441 2.631 1.636 H9 UQF 52 UQF H8 H5 H 0 1 N N N N N N 14.279 6.813 11.579 -2.049 1.879 1.510 H8 UQF 53 UQF H29 H6 H 0 1 N N N N N N 17.746 10.873 7.221 -6.124 -0.553 -4.004 H29 UQF 54 UQF H15 H8 H 0 1 N N N N N N 13.935 11.559 12.388 0.561 3.060 -2.124 H15 UQF 55 UQF H14 H9 H 0 1 N N N N N N 14.023 10.454 13.802 0.902 2.097 -3.581 H14 UQF 56 UQF H13 H10 H 0 1 N N N N N N 11.991 9.629 12.520 -1.054 0.354 -0.322 H13 UQF 57 UQF H12 H11 H 0 1 N N N N N N 13.039 8.591 13.545 0.489 1.208 -0.083 H12 UQF 58 UQF H25 H12 H 0 1 N N N N N N 19.112 10.371 16.088 3.118 -3.351 -2.050 H25 UQF 59 UQF H11 H13 H 0 1 N N N N N N 12.061 7.971 10.744 -2.180 2.461 -0.866 H11 UQF 60 UQF H10 H14 H 0 1 N N N N N N 11.400 7.309 12.277 -0.637 3.344 -0.764 H10 UQF 61 UQF H4 H15 H 0 1 N N N N N N 15.214 5.043 11.399 -3.100 5.838 3.846 H4 UQF 62 UQF H5 H16 H 0 1 N N N N N N 15.460 3.503 10.646 -3.122 6.162 2.198 H5 UQF 63 UQF H16 H17 H 0 1 N N N N N N 23.777 11.127 12.885 8.764 -1.227 1.548 H16 UQF 64 UQF H H18 H 0 1 N N N N N N 20.273 8.762 14.088 2.726 -0.683 0.085 H UQF 65 UQF H1 H19 H 0 1 N N N N N N 19.234 6.281 13.471 2.202 -2.530 1.911 H1 UQF 66 UQF H20 H20 H 0 1 N N N N N N 17.408 6.061 11.908 4.908 -3.420 3.031 H20 UQF 67 UQF H19 H21 H 0 1 N N N N N N 16.935 5.444 13.528 3.388 -4.332 3.186 H19 UQF 68 UQF H22 H22 H 0 1 N N N N N N 17.372 7.033 15.506 4.539 -4.076 0.772 H22 UQF 69 UQF H24 H23 H 0 1 N N N N N N 17.379 9.390 14.849 4.994 -2.469 -0.822 H24 UQF 70 UQF H27 H24 H 0 1 N N N N N N 13.221 9.108 10.014 -1.960 2.080 -2.515 H27 UQF 71 UQF H26 H25 H 0 1 N N N N N N 13.498 10.848 10.368 -1.132 1.365 -3.919 H26 UQF 72 UQF H2 H26 H 0 1 N N N N N N 15.973 10.350 10.407 -1.636 -0.921 -2.979 H2 UQF 73 UQF H3 H27 H 0 1 N N N N N N 17.733 8.447 9.446 -3.933 -1.846 -1.585 H3 UQF 74 UQF H28 H28 H 0 1 N N N N N N 16.431 8.965 6.883 -5.072 0.883 -2.412 H28 UQF 75 UQF H30 H29 H 0 1 N N N N N N 14.508 9.835 7.793 -3.499 0.996 -4.153 H30 UQF 76 UQF H32 H30 H 0 1 N N N N N N 14.771 6.730 7.607 -3.843 1.348 0.487 H32 UQF 77 UQF H33 H31 H 0 1 N N N N N N 20.936 5.400 8.690 -7.953 -3.698 0.278 H33 UQF 78 UQF H35 H32 H 0 1 N N N N N N 18.912 2.283 6.552 -7.353 0.322 3.645 H35 UQF 79 UQF H34 H33 H 0 1 N N N N N N 17.388 2.293 7.137 -8.519 -0.877 3.816 H34 UQF 80 UQF H18 H34 H 0 1 N N N N N N 22.057 14.549 10.939 8.034 3.047 -1.462 H18 UQF 81 UQF H17 H35 H 0 1 N N N N N N 20.624 14.011 10.369 9.519 2.598 -0.818 H17 UQF 82 UQF H23 H36 H 0 1 N N N N N N 19.455 7.226 16.587 2.286 -4.934 0.829 H23 UQF 83 UQF H31 H37 H 0 1 N N N N N N 14.819 12.049 8.476 -4.222 -1.036 -5.183 H31 UQF 84 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UQF N C SING N N 1 UQF N1 C DOUB N N 2 UQF C N2 SING N N 3 UQF N2 C1 SING N N 4 UQF C1 C2 SING N N 5 UQF C2 C3 SING N N 6 UQF C3 N3 SING N N 7 UQF C4 N3 SING N N 8 UQF C5 C4 SING N N 9 UQF C6 C5 TRIP N N 10 UQF C7 C6 SING N N 11 UQF C7 N4 DOUB Y N 12 UQF N4 C8 SING Y N 13 UQF C8 C9 DOUB Y N 14 UQF N5 C9 SING Y N 15 UQF C10 N5 DOUB Y N 16 UQF N6 C10 SING Y N 17 UQF C11 N6 DOUB Y N 18 UQF C8 C11 SING Y N 19 UQF N7 C11 SING N N 20 UQF C9 N8 SING Y N 21 UQF N8 C7 SING Y N 22 UQF C12 N8 SING N N 23 UQF C12 O SING N N 24 UQF O C13 SING N N 25 UQF C14 C13 SING N N 26 UQF O1 C14 SING N N 27 UQF C13 C15 SING N N 28 UQF O2 C15 SING N N 29 UQF C15 C16 SING N N 30 UQF C16 C12 SING N N 31 UQF O3 C16 SING N N 32 UQF N3 C17 SING N N 33 UQF C17 C18 SING N N 34 UQF C18 O4 SING N N 35 UQF O4 C19 SING N N 36 UQF C19 C20 SING N N 37 UQF O5 C20 SING N N 38 UQF C20 C21 SING N N 39 UQF C18 C21 SING N N 40 UQF C21 O6 SING N N 41 UQF N9 C19 SING N N 42 UQF N9 C22 SING Y N 43 UQF C22 N10 DOUB Y N 44 UQF N10 C23 SING Y N 45 UQF C23 C24 DOUB Y N 46 UQF C24 N9 SING Y N 47 UQF N11 C24 SING Y N 48 UQF C25 N11 DOUB Y N 49 UQF N12 C25 SING Y N 50 UQF C26 N12 DOUB Y N 51 UQF C23 C26 SING Y N 52 UQF N13 C26 SING N N 53 UQF N1 H6 SING N N 54 UQF N2 H7 SING N N 55 UQF O1 H21 SING N N 56 UQF C1 H9 SING N N 57 UQF C1 H8 SING N N 58 UQF O5 H29 SING N N 59 UQF C4 H15 SING N N 60 UQF C4 H14 SING N N 61 UQF C3 H13 SING N N 62 UQF C3 H12 SING N N 63 UQF O3 H25 SING N N 64 UQF C2 H11 SING N N 65 UQF C2 H10 SING N N 66 UQF N H4 SING N N 67 UQF N H5 SING N N 68 UQF C10 H16 SING N N 69 UQF C12 H SING N N 70 UQF C13 H1 SING N N 71 UQF C14 H20 SING N N 72 UQF C14 H19 SING N N 73 UQF C15 H22 SING N N 74 UQF C16 H24 SING N N 75 UQF C17 H27 SING N N 76 UQF C17 H26 SING N N 77 UQF C18 H2 SING N N 78 UQF C19 H3 SING N N 79 UQF C20 H28 SING N N 80 UQF C21 H30 SING N N 81 UQF C22 H32 SING N N 82 UQF C25 H33 SING N N 83 UQF N13 H35 SING N N 84 UQF N13 H34 SING N N 85 UQF N7 H18 SING N N 86 UQF N7 H17 SING N N 87 UQF O2 H23 SING N N 88 UQF O6 H31 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UQF InChI InChI 1.06 "InChI=1S/C27H36N14O7/c28-21-15-23(35-9-33-21)40(11-37-15)25-19(45)17(43)12(47-25)7-39(6-2-4-32-27(30)31)5-1-3-14-38-16-22(29)34-10-36-24(16)41(14)26-20(46)18(44)13(8-42)48-26/h9-13,17-20,25-26,42-46H,2,4-8H2,(H2,28,33,35)(H2,29,34,36)(H4,30,31,32)/t12-,13?,17+,18+,19+,20+,25-,26-/m0/s1" UQF InChIKey InChI 1.06 WIINMVYDNPDNAN-QOOQKWEPSA-N UQF SMILES_CANONICAL CACTVS 3.385 "NC(=N)NCCCN(CC#Cc1nc2c(N)ncnc2n1[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)C[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56" UQF SMILES CACTVS 3.385 "NC(=N)NCCCN(CC#Cc1nc2c(N)ncnc2n1[CH]3O[CH](CO)[CH](O)[CH]3O)C[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56" UQF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NCCCN(CC#Cc1nc2c(ncnc2n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)N)C[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O" UQF SMILES "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CN(CCCNC(=N)N)CC#Cc4nc5c(ncnc5n4C6C(C(C(O6)CO)O)O)N)O)O)N" # _pdbx_chem_comp_identifier.comp_id UQF _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[3-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]prop-2-ynyl]amino]propyl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UQF "Create component" 2023-09-06 PDBE UQF "Initial release" 2025-03-19 RCSB #