data_URJ # _chem_comp.id URJ _chem_comp.name "4-fluoro-N-{1-[5-(2-methylpyrimidin-4-yl)-5,6,7,8-tetrahydro-1,5-naphthyridin-2-yl]cyclopropyl}benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H22 F N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-28 _chem_comp.pdbx_modified_date 2021-05-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 403.452 _chem_comp.one_letter_code ? _chem_comp.three_letter_code URJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6X5Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal URJ C2 C1 C 0 1 Y N N 76.687 16.988 31.347 6.014 -2.105 -0.121 C2 URJ 1 URJ C3 C2 C 0 1 Y N N 75.753 17.022 32.388 5.595 -1.770 1.158 C3 URJ 2 URJ C4 C3 C 0 1 Y N N 74.755 16.056 32.469 4.642 -0.791 1.339 C4 URJ 3 URJ C5 C4 C 0 1 Y N N 74.676 15.022 31.502 4.098 -0.136 0.232 C5 URJ 4 URJ C6 C5 C 0 1 Y N N 75.622 15.011 30.449 4.523 -0.477 -1.053 C6 URJ 5 URJ C7 C6 C 0 1 Y N N 76.618 15.980 30.384 5.477 -1.458 -1.223 C7 URJ 6 URJ C8 C7 C 0 1 N N N 73.602 13.996 31.572 3.075 0.913 0.420 C8 URJ 7 URJ O9 O1 O 0 1 N N N 72.516 14.377 31.981 2.706 1.209 1.540 O9 URJ 8 URJ N10 N1 N 0 1 N N N 73.819 12.696 31.190 2.552 1.544 -0.650 N10 URJ 9 URJ C11 C8 C 0 1 N N N 72.770 11.656 31.209 1.451 2.494 -0.474 C11 URJ 10 URJ C12 C9 C 0 1 N N N 73.174 10.217 31.541 1.754 3.797 0.269 C12 URJ 11 URJ C15 C10 C 0 1 Y N N 70.525 12.527 30.513 -0.067 0.513 -0.401 C15 URJ 12 URJ C16 C11 C 0 1 Y N N 69.558 12.780 29.538 -1.323 -0.040 -0.213 C16 URJ 13 URJ C17 C12 C 0 1 Y N N 69.795 12.365 28.212 -2.383 0.812 0.091 C17 URJ 14 URJ C18 C13 C 0 1 Y N N 71.030 11.752 27.925 -2.154 2.174 0.199 C18 URJ 15 URJ C21 C14 C 0 1 N N N 70.539 12.033 25.414 -4.626 2.502 0.220 C21 URJ 16 URJ C24 C15 C 0 1 Y N N 67.509 12.258 27.110 -3.942 -1.028 -0.100 C24 URJ 17 URJ F1 F1 F 0 1 N N N 77.654 17.924 31.265 6.952 -3.061 -0.292 F1 URJ 18 URJ C13 C16 C 0 1 N N N 72.350 11.032 32.542 1.526 3.814 -1.244 C13 URJ 19 URJ C14 C17 C 0 1 Y N N 71.715 11.893 30.155 0.088 1.881 -0.276 C14 URJ 20 URJ N19 N2 N 0 1 Y N N 71.934 11.541 28.891 -0.937 2.657 0.008 N19 URJ 21 URJ C20 C18 C 0 1 N N N 71.357 11.314 26.512 -3.269 3.129 0.538 C20 URJ 22 URJ C22 C19 C 0 1 N N N 69.609 13.144 25.954 -4.703 1.120 0.881 C22 URJ 23 URJ N23 N3 N 0 1 N N N 68.894 12.578 27.134 -3.662 0.276 0.278 N23 URJ 24 URJ C25 C20 C 0 1 Y N N 66.769 11.748 28.218 -4.456 -1.304 -1.368 C25 URJ 25 URJ C26 C21 C 0 1 Y N N 65.413 11.474 28.064 -4.719 -2.620 -1.697 C26 URJ 26 URJ N27 N4 N 0 1 Y N N 64.807 11.678 26.891 -4.477 -3.570 -0.804 N27 URJ 27 URJ C28 C22 C 0 1 Y N N 65.496 12.147 25.861 -3.991 -3.276 0.385 C28 URJ 28 URJ C29 C23 C 0 1 N N N 64.786 12.360 24.551 -3.727 -4.391 1.364 C29 URJ 29 URJ N30 N5 N 0 1 Y N N 66.797 12.422 25.967 -3.721 -2.036 0.739 N30 URJ 30 URJ H1 H1 H 0 1 N N N 75.807 17.802 33.133 6.017 -2.276 2.013 H1 URJ 31 URJ H2 H2 H 0 1 N N N 74.036 16.094 33.274 4.316 -0.531 2.336 H2 URJ 32 URJ H3 H3 H 0 1 N N N 75.570 14.244 29.690 4.106 0.026 -1.913 H3 URJ 33 URJ H4 H4 H 0 1 N N N 77.342 15.952 29.583 5.807 -1.722 -2.217 H4 URJ 34 URJ H5 H5 H 0 1 N N N 74.735 12.439 30.883 2.904 1.368 -1.536 H5 URJ 35 URJ H6 H6 H 0 1 N N N 72.711 9.377 31.002 0.968 4.211 0.900 H6 URJ 36 URJ H7 H7 H 0 1 N N N 74.225 9.977 31.760 2.772 3.947 0.626 H7 URJ 37 URJ H8 H8 H 0 1 N N N 70.353 12.820 31.538 0.779 -0.116 -0.637 H8 URJ 38 URJ H9 H9 H 0 1 N N N 68.640 13.287 29.797 -1.477 -1.105 -0.300 H9 URJ 39 URJ H10 H10 H 0 1 N N N 69.921 11.285 24.896 -5.422 3.138 0.609 H10 URJ 40 URJ H11 H11 H 0 1 N N N 71.242 12.486 24.699 -4.736 2.397 -0.860 H11 URJ 41 URJ H12 H12 H 0 1 N N N 72.809 11.378 33.480 2.396 3.975 -1.882 H12 URJ 42 URJ H13 H13 H 0 1 N N N 71.295 10.778 32.722 0.591 4.239 -1.608 H13 URJ 43 URJ H14 H14 H 0 1 N N N 71.164 10.234 26.433 -3.225 3.372 1.599 H14 URJ 44 URJ H15 H15 H 0 1 N N N 72.424 11.510 26.330 -3.150 4.043 -0.045 H15 URJ 45 URJ H16 H16 H 0 1 N N N 70.202 14.020 26.256 -4.527 1.214 1.953 H16 URJ 46 URJ H17 H17 H 0 1 N N N 68.886 13.440 25.180 -5.684 0.680 0.704 H17 URJ 47 URJ H18 H18 H 0 1 N N N 67.256 11.576 29.167 -4.644 -0.509 -2.075 H18 URJ 48 URJ H19 H19 H 0 1 N N N 64.846 11.093 28.900 -5.117 -2.872 -2.668 H19 URJ 49 URJ H20 H20 H 0 1 N N N 65.498 12.744 23.805 -4.615 -4.559 1.972 H20 URJ 50 URJ H21 H21 H 0 1 N N N 64.368 11.405 24.201 -3.482 -5.303 0.819 H21 URJ 51 URJ H22 H22 H 0 1 N N N 63.973 13.087 24.689 -2.891 -4.119 2.009 H22 URJ 52 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal URJ C29 C28 SING N N 1 URJ C21 C22 SING N N 2 URJ C21 C20 SING N N 3 URJ C28 N30 DOUB Y N 4 URJ C28 N27 SING Y N 5 URJ C22 N23 SING N N 6 URJ N30 C24 SING Y N 7 URJ C20 C18 SING N N 8 URJ N27 C26 DOUB Y N 9 URJ C24 N23 SING N N 10 URJ C24 C25 DOUB Y N 11 URJ N23 C17 SING N N 12 URJ C18 C17 DOUB Y N 13 URJ C18 N19 SING Y N 14 URJ C26 C25 SING Y N 15 URJ C17 C16 SING Y N 16 URJ N19 C14 DOUB Y N 17 URJ C16 C15 DOUB Y N 18 URJ C14 C15 SING Y N 19 URJ C14 C11 SING N N 20 URJ C7 C6 DOUB Y N 21 URJ C7 C2 SING Y N 22 URJ C6 C5 SING Y N 23 URJ N10 C11 SING N N 24 URJ N10 C8 SING N N 25 URJ C11 C12 SING N N 26 URJ C11 C13 SING N N 27 URJ F1 C2 SING N N 28 URJ C2 C3 DOUB Y N 29 URJ C5 C8 SING N N 30 URJ C5 C4 DOUB Y N 31 URJ C12 C13 SING N N 32 URJ C8 O9 DOUB N N 33 URJ C3 C4 SING Y N 34 URJ C3 H1 SING N N 35 URJ C4 H2 SING N N 36 URJ C6 H3 SING N N 37 URJ C7 H4 SING N N 38 URJ N10 H5 SING N N 39 URJ C12 H6 SING N N 40 URJ C12 H7 SING N N 41 URJ C15 H8 SING N N 42 URJ C16 H9 SING N N 43 URJ C21 H10 SING N N 44 URJ C21 H11 SING N N 45 URJ C13 H12 SING N N 46 URJ C13 H13 SING N N 47 URJ C20 H14 SING N N 48 URJ C20 H15 SING N N 49 URJ C22 H16 SING N N 50 URJ C22 H17 SING N N 51 URJ C25 H18 SING N N 52 URJ C26 H19 SING N N 53 URJ C29 H20 SING N N 54 URJ C29 H21 SING N N 55 URJ C29 H22 SING N N 56 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor URJ SMILES ACDLabs 12.01 "c5(ccc(C(=O)NC1(CC1)c2ccc3c(n2)CCCN3c4ccnc(n4)C)cc5)F" URJ InChI InChI 1.03 "InChI=1S/C23H22FN5O/c1-15-25-13-10-21(26-15)29-14-2-3-18-19(29)8-9-20(27-18)23(11-12-23)28-22(30)16-4-6-17(24)7-5-16/h4-10,13H,2-3,11-12,14H2,1H3,(H,28,30)" URJ InChIKey InChI 1.03 KKAMMYSFTPLTDH-UHFFFAOYSA-N URJ SMILES_CANONICAL CACTVS 3.385 "Cc1nccc(n1)N2CCCc3nc(ccc23)C4(CC4)NC(=O)c5ccc(F)cc5" URJ SMILES CACTVS 3.385 "Cc1nccc(n1)N2CCCc3nc(ccc23)C4(CC4)NC(=O)c5ccc(F)cc5" URJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1nccc(n1)N2CCCc3c2ccc(n3)C4(CC4)NC(=O)c5ccc(cc5)F" URJ SMILES "OpenEye OEToolkits" 2.0.7 "Cc1nccc(n1)N2CCCc3c2ccc(n3)C4(CC4)NC(=O)c5ccc(cc5)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier URJ "SYSTEMATIC NAME" ACDLabs 12.01 "4-fluoro-N-{1-[5-(2-methylpyrimidin-4-yl)-5,6,7,8-tetrahydro-1,5-naphthyridin-2-yl]cyclopropyl}benzamide" URJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-fluoranyl-~{N}-[1-[5-(2-methylpyrimidin-4-yl)-7,8-dihydro-6~{H}-1,5-naphthyridin-2-yl]cyclopropyl]benzamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site URJ "Create component" 2020-05-28 RCSB URJ "Initial release" 2021-06-02 RCSB ##