data_UTY # _chem_comp.id UTY _chem_comp.name "3-[(6-{2-[(3R)-4-(hydroxyacetyl)-3-methylpiperazin-1-yl]pyrimidin-5-yl}-2,2-dimethyl-3-oxo-2,3-dihydro-1H-indol-1-yl)methyl]pyridine-2-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H29 N7 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-06-02 _chem_comp.pdbx_modified_date 2021-01-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 511.575 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UTY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6X86 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UTY N1 N1 N 0 1 N N N 25.984 23.535 -8.853 7.106 0.694 0.361 N1 UTY 1 UTY N3 N2 N 0 1 Y N N 25.693 19.050 -7.196 2.126 0.651 0.634 N3 UTY 2 UTY C4 C1 C 0 1 N N N 25.910 22.875 -7.541 6.149 1.804 0.237 C4 UTY 3 UTY C5 C2 C 0 1 N N N 26.370 24.822 -9.068 8.286 0.723 -0.289 C5 UTY 4 UTY C6 C3 C 0 1 N N N 26.778 25.669 -7.875 8.590 1.843 -1.250 C6 UTY 5 UTY C7 C4 C 0 1 Y N N 25.644 19.522 -8.454 3.109 -0.239 0.627 C7 UTY 6 UTY C8 C5 C 0 1 Y N N 24.689 17.646 -9.291 1.658 -1.980 0.221 C8 UTY 7 UTY C10 C6 C 0 1 Y N N 25.223 17.810 -7.026 0.874 0.279 0.438 C10 UTY 8 UTY C13 C7 C 0 1 Y N N 24.190 13.490 -6.782 -2.328 -3.323 -0.434 C13 UTY 9 UTY C15 C8 C 0 1 N N N 22.710 11.719 -7.996 -4.834 -2.607 -0.621 C15 UTY 10 UTY C17 C9 C 0 1 N N N 20.178 11.703 -8.304 -6.439 -1.196 0.668 C17 UTY 11 UTY C20 C10 C 0 1 Y N N 21.295 14.648 -11.470 -5.529 1.526 0.789 C20 UTY 12 UTY C21 C11 C 0 1 Y N N 22.263 13.991 -12.234 -6.660 1.620 1.584 C21 UTY 13 UTY C22 C12 C 0 1 Y N N 22.755 14.576 -13.388 -7.554 2.652 1.344 C22 UTY 14 UTY C24 C13 C 0 1 Y N N 20.855 15.885 -11.956 -5.328 2.473 -0.215 C24 UTY 15 UTY C26 C14 C 0 1 Y N N 22.600 13.951 -8.535 -3.147 -1.043 -0.208 C26 UTY 16 UTY N6 N3 N 0 1 N N N 19.184 17.147 -10.438 -3.236 2.331 -1.698 N6 UTY 17 UTY C25 C15 C 0 1 N N N 19.920 16.616 -11.130 -4.161 2.394 -1.042 C25 UTY 18 UTY N5 N4 N 0 1 Y N N 21.295 16.468 -13.088 -6.209 3.446 -0.412 N5 UTY 19 UTY C23 C16 C 0 1 Y N N 22.254 15.809 -13.766 -7.294 3.554 0.326 C23 UTY 20 UTY C19 C17 C 0 1 N N N 20.757 14.087 -10.175 -4.528 0.423 1.011 C19 UTY 21 UTY N4 N5 N 0 1 N N N 21.721 13.311 -9.408 -4.328 -0.317 -0.242 N4 UTY 22 UTY C16 C18 C 0 1 N N N 21.513 11.890 -9.027 -5.451 -1.231 -0.499 C16 UTY 23 UTY C18 C19 C 0 1 N N N 21.644 10.972 -10.245 -6.157 -0.848 -1.801 C18 UTY 24 UTY O2 O1 O 0 1 N N N 23.142 10.640 -7.629 -5.411 -3.654 -0.835 O2 UTY 25 UTY C14 C20 C 0 1 Y N N 23.141 13.057 -7.603 -3.393 -2.410 -0.428 C14 UTY 26 UTY C12 C21 C 0 1 Y N N 24.651 14.798 -6.889 -1.053 -2.892 -0.223 C12 UTY 27 UTY C27 C22 C 0 1 Y N N 23.041 15.263 -8.623 -1.840 -0.615 0.001 C27 UTY 28 UTY C11 C23 C 0 1 Y N N 24.096 15.698 -7.814 -0.797 -1.535 -0.003 C11 UTY 29 UTY C9 C24 C 0 1 Y N N 24.694 17.033 -8.045 0.593 -1.074 0.221 C9 UTY 30 UTY N2 N6 N 0 1 Y N N 25.143 18.878 -9.522 2.883 -1.530 0.425 N2 UTY 31 UTY N N7 N 0 1 N N N 26.199 20.745 -8.675 4.406 0.191 0.835 N UTY 32 UTY C2 C25 C 0 1 N N N 26.323 21.382 -9.988 5.348 -0.934 0.809 C2 UTY 33 UTY C3 C26 C 0 1 N N N 26.679 21.579 -7.570 4.779 1.228 -0.137 C3 UTY 34 UTY C1 C27 C 0 1 N N R 25.594 22.715 -10.014 6.742 -0.446 1.216 C1 UTY 35 UTY C C28 C 0 1 N N N 24.086 22.555 -10.112 7.756 -1.577 1.036 C UTY 36 UTY O O2 O 0 1 N N N 26.368 25.321 -10.184 9.104 -0.152 -0.099 O UTY 37 UTY O1 O3 O 0 1 N N N 26.266 26.975 -8.081 9.892 1.652 -1.807 O1 UTY 38 UTY H1 H1 H 0 1 N N N 26.341 23.537 -6.776 6.076 2.332 1.188 H1 UTY 39 UTY H2 H2 H 0 1 N N N 24.858 22.668 -7.296 6.484 2.492 -0.539 H2 UTY 40 UTY H3 H3 H 0 1 N N N 26.359 25.243 -6.952 7.850 1.846 -2.050 H3 UTY 41 UTY H4 H4 H 0 1 N N N 27.875 25.704 -7.797 8.557 2.795 -0.721 H4 UTY 42 UTY H5 H5 H 0 1 N N N 24.292 17.089 -10.127 1.482 -3.033 0.058 H5 UTY 43 UTY H6 H6 H 0 1 N N N 25.258 17.387 -6.033 0.078 1.009 0.445 H6 UTY 44 UTY H7 H7 H 0 1 N N N 24.638 12.812 -6.070 -2.521 -4.372 -0.603 H7 UTY 45 UTY H8 H8 H 0 1 N N N 20.131 12.381 -7.439 -6.841 -0.188 0.773 H8 UTY 46 UTY H9 H9 H 0 1 N N N 19.352 11.931 -8.994 -7.254 -1.893 0.475 H9 UTY 47 UTY H10 H10 H 0 1 N N N 20.091 10.662 -7.959 -5.927 -1.480 1.587 H10 UTY 48 UTY H11 H11 H 0 1 N N N 22.629 13.023 -11.923 -6.841 0.904 2.372 H11 UTY 49 UTY H12 H12 H 0 1 N N N 23.512 14.082 -13.979 -8.446 2.752 1.946 H12 UTY 50 UTY H13 H13 H 0 1 N N N 22.655 16.270 -14.657 -7.989 4.359 0.137 H13 UTY 51 UTY H14 H14 H 0 1 N N N 20.418 14.927 -9.551 -3.580 0.852 1.335 H14 UTY 52 UTY H15 H15 H 0 1 N N N 19.902 13.437 -10.411 -4.900 -0.257 1.778 H15 UTY 53 UTY H16 H16 H 0 1 N N N 21.486 9.928 -9.937 -5.450 -0.910 -2.629 H16 UTY 54 UTY H17 H17 H 0 1 N N N 20.890 11.250 -10.996 -6.986 -1.533 -1.980 H17 UTY 55 UTY H18 H18 H 0 1 N N N 22.650 11.078 -10.678 -6.537 0.170 -1.723 H18 UTY 56 UTY H19 H19 H 0 1 N N N 25.454 15.129 -6.247 -0.237 -3.600 -0.225 H19 UTY 57 UTY H20 H20 H 0 1 N N N 22.571 15.947 -9.314 -1.636 0.431 0.171 H20 UTY 58 UTY H21 H21 H 0 1 N N N 25.890 20.720 -10.752 5.014 -1.704 1.505 H21 UTY 59 UTY H22 H22 H 0 1 N N N 27.388 21.549 -10.208 5.392 -1.349 -0.198 H22 UTY 60 UTY H23 H23 H 0 1 N N N 26.533 21.046 -6.619 4.034 2.023 -0.124 H23 UTY 61 UTY H24 H24 H 0 1 N N N 27.749 21.792 -7.710 4.829 0.791 -1.134 H24 UTY 62 UTY H25 H25 H 0 1 N N N 25.922 23.245 -10.921 6.728 -0.125 2.258 H25 UTY 63 UTY H26 H26 H 0 1 N N N 23.612 23.547 -10.127 7.867 -1.801 -0.025 H26 UTY 64 UTY H27 H27 H 0 1 N N N 23.834 22.014 -11.036 8.719 -1.271 1.445 H27 UTY 65 UTY H28 H28 H 0 1 N N N 23.720 21.987 -9.244 7.405 -2.467 1.559 H28 UTY 66 UTY H29 H29 H 0 1 N N N 26.019 27.079 -8.992 10.155 2.338 -2.437 H29 UTY 67 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UTY C23 C22 DOUB Y N 1 UTY C23 N5 SING Y N 2 UTY C22 C21 SING Y N 3 UTY N5 C24 DOUB Y N 4 UTY C21 C20 DOUB Y N 5 UTY C24 C20 SING Y N 6 UTY C24 C25 SING N N 7 UTY C20 C19 SING N N 8 UTY C25 N6 TRIP N N 9 UTY C18 C16 SING N N 10 UTY O C5 DOUB N N 11 UTY C19 N4 SING N N 12 UTY C C1 SING N N 13 UTY C1 C2 SING N N 14 UTY C1 N1 SING N N 15 UTY C2 N SING N N 16 UTY N2 C8 DOUB Y N 17 UTY N2 C7 SING Y N 18 UTY N4 C16 SING N N 19 UTY N4 C26 SING N N 20 UTY C8 C9 SING Y N 21 UTY C5 N1 SING N N 22 UTY C5 C6 SING N N 23 UTY C16 C17 SING N N 24 UTY C16 C15 SING N N 25 UTY N1 C4 SING N N 26 UTY N C7 SING N N 27 UTY N C3 SING N N 28 UTY C27 C26 DOUB Y N 29 UTY C27 C11 SING Y N 30 UTY C26 C14 SING Y N 31 UTY C7 N3 DOUB Y N 32 UTY O1 C6 SING N N 33 UTY C9 C11 SING N N 34 UTY C9 C10 DOUB Y N 35 UTY C15 O2 DOUB N N 36 UTY C15 C14 SING N N 37 UTY C11 C12 DOUB Y N 38 UTY C14 C13 DOUB Y N 39 UTY C3 C4 SING N N 40 UTY N3 C10 SING Y N 41 UTY C12 C13 SING Y N 42 UTY C4 H1 SING N N 43 UTY C4 H2 SING N N 44 UTY C6 H3 SING N N 45 UTY C6 H4 SING N N 46 UTY C8 H5 SING N N 47 UTY C10 H6 SING N N 48 UTY C13 H7 SING N N 49 UTY C17 H8 SING N N 50 UTY C17 H9 SING N N 51 UTY C17 H10 SING N N 52 UTY C21 H11 SING N N 53 UTY C22 H12 SING N N 54 UTY C23 H13 SING N N 55 UTY C19 H14 SING N N 56 UTY C19 H15 SING N N 57 UTY C18 H16 SING N N 58 UTY C18 H17 SING N N 59 UTY C18 H18 SING N N 60 UTY C12 H19 SING N N 61 UTY C27 H20 SING N N 62 UTY C2 H21 SING N N 63 UTY C2 H22 SING N N 64 UTY C3 H23 SING N N 65 UTY C3 H24 SING N N 66 UTY C1 H25 SING N N 67 UTY C H26 SING N N 68 UTY C H27 SING N N 69 UTY C H28 SING N N 70 UTY O1 H29 SING N N 71 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UTY SMILES ACDLabs 12.01 "N5(CCN(c1ncc(cn1)c3ccc2C(=O)C(C)(N(c2c3)Cc4cccnc4C#N)C)CC5C)C(CO)=O" UTY InChI InChI 1.03 "InChI=1S/C28H29N7O3/c1-18-15-33(9-10-34(18)25(37)17-36)27-31-13-21(14-32-27)19-6-7-22-24(11-19)35(28(2,3)26(22)38)16-20-5-4-8-30-23(20)12-29/h4-8,11,13-14,18,36H,9-10,15-17H2,1-3H3/t18-/m1/s1" UTY InChIKey InChI 1.03 BTHCNWXORDNTOR-GOSISDBHSA-N UTY SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1CN(CCN1C(=O)CO)c2ncc(cn2)c3ccc4C(=O)C(C)(C)N(Cc5cccnc5C#N)c4c3" UTY SMILES CACTVS 3.385 "C[CH]1CN(CCN1C(=O)CO)c2ncc(cn2)c3ccc4C(=O)C(C)(C)N(Cc5cccnc5C#N)c4c3" UTY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1CN(CCN1C(=O)CO)c2ncc(cn2)c3ccc4c(c3)N(C(C4=O)(C)C)Cc5cccnc5C#N" UTY SMILES "OpenEye OEToolkits" 2.0.7 "CC1CN(CCN1C(=O)CO)c2ncc(cn2)c3ccc4c(c3)N(C(C4=O)(C)C)Cc5cccnc5C#N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UTY "SYSTEMATIC NAME" ACDLabs 12.01 "3-[(6-{2-[(3R)-4-(hydroxyacetyl)-3-methylpiperazin-1-yl]pyrimidin-5-yl}-2,2-dimethyl-3-oxo-2,3-dihydro-1H-indol-1-yl)methyl]pyridine-2-carbonitrile" UTY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[[2,2-dimethyl-6-[2-[(3~{R})-3-methyl-4-(2-oxidanylethanoyl)piperazin-1-yl]pyrimidin-5-yl]-3-oxidanylidene-indol-1-yl]methyl]pyridine-2-carbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UTY "Create component" 2020-06-02 RCSB UTY "Initial release" 2021-01-13 RCSB ##