data_UUO # _chem_comp.id UUO _chem_comp.name "~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[8-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-pent-4-ynyl-amino]prop-1-ynyl]-6-azanyl-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-4-azanyl-butanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H41 N13 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-07 _chem_comp.pdbx_modified_date 2025-03-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 719.751 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UUO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QG3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UUO N1 N1 N 0 1 N N N N N N 16.032 6.617 13.249 1.317 2.306 -2.876 N1 UUO 1 UUO C7 C1 C 0 1 N N R N N N 18.521 9.271 15.264 4.663 -0.532 -1.196 C7 UUO 2 UUO C8 C2 C 0 1 N N S N N N 18.194 7.779 15.340 4.109 -0.262 -2.616 C8 UUO 3 UUO N2 N2 N 0 1 Y N N N N N 19.679 10.482 13.343 4.648 0.836 0.872 N2 UUO 4 UUO C9 C3 C 0 1 Y N N N N N 18.653 11.259 12.797 3.553 0.491 1.625 C9 UUO 5 UUO O1 O1 O 0 1 N N N N N N 19.356 8.168 13.325 3.532 1.529 -1.127 O1 UUO 6 UUO C1 C4 C 0 1 N N N N N N 15.442 3.428 14.591 -2.106 3.674 -3.559 C1 UUO 7 UUO O5 O2 O 0 1 N N N N N N 17.852 10.264 7.882 -5.886 -2.537 -0.522 O5 UUO 8 UUO C5 C5 C 0 1 N N R N N N 18.302 7.356 13.879 3.415 1.109 -2.496 C5 UUO 9 UUO C6 C6 C 0 1 N N R N N N 19.589 9.284 14.164 4.712 0.894 -0.590 C6 UUO 10 UUO N3 N3 N 0 1 Y N N N N N 19.097 12.324 12.158 3.859 0.549 2.900 N3 UUO 11 UUO C4 C7 C 0 1 N N N N N N 17.085 7.588 13.004 1.939 0.980 -2.877 C4 UUO 12 UUO O4 O3 O 0 1 N N N N N N 15.899 8.396 9.935 -2.620 -1.351 0.385 O4 UUO 13 UUO C3 C8 C 0 1 N N N N N N 16.215 5.307 13.115 0.011 2.439 -3.184 C3 UUO 14 UUO O3 O4 O 0 1 N N N N N N 19.146 7.074 16.132 5.174 -0.202 -3.566 O3 UUO 15 UUO C2 C9 C 0 1 N N N N N N 15.056 4.439 13.527 -0.630 3.802 -3.177 C2 UUO 16 UUO N4 N4 N 0 1 Y N N N N N 22.104 10.717 13.264 6.934 1.503 1.608 N4 UUO 17 UUO N N5 N 0 1 N N N N N N 14.892 1.172 15.293 -4.175 4.934 -3.918 N UUO 18 UUO C C10 C 0 1 N N N N N N 15.150 2.013 14.145 -2.757 5.058 -3.552 C UUO 19 UUO O O5 O 0 1 N N N N N N 17.260 4.817 12.698 -0.647 1.460 -3.466 O UUO 20 UUO C10 C11 C 0 1 Y N N N N N 20.481 12.237 12.274 5.148 0.928 3.036 C10 UUO 21 UUO C11 C12 C 0 1 Y N N N N N 20.855 11.110 12.988 5.669 1.122 1.744 C11 UUO 22 UUO C12 C13 C 0 1 Y N N N N N 22.999 11.570 12.760 7.695 1.694 2.665 C12 UUO 23 UUO C13 C14 C 0 1 Y N N N N N 21.516 13.066 11.803 6.000 1.152 4.134 C13 UUO 24 UUO C14 C15 C 0 1 N N N N N N 17.268 10.906 12.901 2.272 0.125 1.100 C14 UUO 25 UUO C15 C16 C 0 1 N N N N N N 16.087 10.722 12.923 1.222 -0.176 0.669 C15 UUO 26 UUO C16 C17 C 0 1 N N N N N N 14.645 10.432 12.996 -0.095 -0.552 0.129 C16 UUO 27 UUO C17 C18 C 0 1 N N N N N N 12.826 8.957 12.436 0.449 -2.910 0.064 C17 UUO 28 UUO C18 C19 C 0 1 N N N N N N 12.848 7.595 13.110 0.787 -4.068 -0.877 C18 UUO 29 UUO C19 C20 C 0 1 N N N N N N 12.301 6.473 12.228 1.332 -5.244 -0.064 C19 UUO 30 UUO C20 C21 C 0 1 N N N N N N 13.165 6.154 11.091 1.657 -6.358 -0.970 C20 UUO 31 UUO C21 C22 C 0 1 N N N N N N 13.846 5.855 10.180 1.916 -7.247 -1.692 C21 UUO 32 UUO C22 C23 C 0 1 N N N N N N 14.124 9.891 10.630 -1.192 -2.004 -1.468 C22 UUO 33 UUO C23 C24 C 0 1 N N R N N N 15.471 9.769 9.946 -2.288 -2.439 -0.493 C23 UUO 34 UUO C24 C25 C 0 1 N N R N N N 16.951 8.314 8.993 -4.033 -1.452 0.665 C24 UUO 35 UUO C25 C26 C 0 1 N N R N N N 16.713 9.412 7.941 -4.644 -1.853 -0.701 C25 UUO 36 UUO C26 C27 C 0 1 N N S N N N 15.476 10.152 8.474 -3.566 -2.806 -1.272 C26 UUO 37 UUO C27 C28 C 0 1 Y N N N N N 15.990 6.273 7.824 -4.031 1.066 0.843 C27 UUO 38 UUO C28 C29 C 0 1 Y N N N N N 17.690 5.009 7.710 -5.804 1.427 2.037 C28 UUO 39 UUO C29 C30 C 0 1 Y N N N N N 18.101 6.147 8.384 -5.689 0.037 1.869 C29 UUO 40 UUO C30 C31 C 0 1 Y N N N N N 20.156 5.389 8.604 -7.598 -0.255 3.115 C30 UUO 41 UUO C31 C32 C 0 1 Y N N N N N 18.665 4.014 7.492 -6.887 1.917 2.787 C31 UUO 42 UUO N10 N6 N 0 1 Y N N N N N 19.323 6.398 8.863 -6.601 -0.759 2.420 N10 UUO 43 UUO N11 N7 N 0 1 Y N N N N N 19.910 4.243 7.962 -7.749 1.044 3.300 N11 UUO 44 UUO N12 N8 N 0 1 N N N N N N 18.433 2.873 6.834 -7.052 3.276 2.988 N12 UUO 45 UUO N5 N9 N 0 1 Y N N N N N 22.788 12.692 12.066 7.251 1.530 3.898 N5 UUO 46 UUO N6 N10 N 0 1 N N N N N N 21.314 14.210 11.142 5.544 0.983 5.430 N6 UUO 47 UUO N7 N11 N 0 1 N N N N N N 14.147 9.454 12.031 0.047 -1.739 -0.725 N7 UUO 48 UUO N8 N12 N 0 1 Y N N N N N 16.998 6.964 8.443 -4.564 -0.160 1.109 N8 UUO 49 UUO N9 N13 N 0 1 Y N N N N N 16.350 5.098 7.366 -4.758 1.995 1.391 N9 UUO 50 UUO O2 O6 O 0 1 N N N N N N 19.066 9.767 16.482 5.970 -1.105 -1.259 O2 UUO 51 UUO O6 O7 O 0 1 N N N N N N 15.587 11.562 8.299 -3.924 -4.168 -1.031 O6 UUO 52 UUO H16 H1 H 0 1 N N N N N N 15.131 6.948 13.530 1.843 3.089 -2.650 H16 UUO 53 UUO H2 H2 H 0 1 N N N N N N 17.636 9.842 14.945 3.987 -1.172 -0.629 H2 UUO 54 UUO H3 H3 H 0 1 N N N N N N 17.167 7.632 15.706 3.389 -1.031 -2.897 H3 UUO 55 UUO H13 H4 H 0 1 N N N N N N 14.871 3.639 15.508 -2.187 3.239 -4.555 H13 UUO 56 UUO H12 H5 H 0 1 N N N N N N 16.518 3.522 14.799 -2.613 3.030 -2.839 H12 UUO 57 UUO H35 H6 H 0 1 N N N N N N 17.707 10.943 7.233 -6.308 -2.809 -1.349 H35 UUO 58 UUO H H7 H 0 1 N N N N N N 18.580 6.293 13.834 3.905 1.830 -3.150 H UUO 59 UUO H1 H8 H 0 1 N N N N N N 20.560 9.145 14.662 5.611 1.420 -0.913 H1 UUO 60 UUO H18 H9 H 0 1 N N N N N N 17.390 7.519 11.949 1.432 0.340 -2.154 H18 UUO 61 UUO H17 H10 H 0 1 N N N N N N 16.691 8.595 13.207 1.857 0.541 -3.871 H17 UUO 62 UUO H20 H11 H 0 1 N N N N N N 18.916 6.153 16.159 5.683 -1.022 -3.639 H20 UUO 63 UUO H15 H12 H 0 1 N N N N N N 14.687 3.898 12.643 -0.124 4.446 -3.896 H15 UUO 64 UUO H14 H13 H 0 1 N N N N N N 14.256 5.082 13.924 -0.549 4.237 -2.180 H14 UUO 65 UUO H8 H14 H 0 1 N N N N N N 14.700 0.239 14.987 -4.652 4.292 -3.304 H8 UUO 66 UUO H9 H15 H 0 1 N N N N N N 15.694 1.169 15.890 -4.627 5.836 -3.921 H9 UUO 67 UUO H10 H17 H 0 1 N N N N N N 16.017 1.619 13.593 -2.677 5.492 -2.555 H10 UUO 68 UUO H11 H18 H 0 1 N N N N N N 14.267 2.013 13.489 -2.251 5.702 -4.271 H11 UUO 69 UUO H21 H19 H 0 1 N N N N N N 24.034 11.319 12.937 8.720 2.004 2.519 H21 UUO 70 UUO H24 H20 H 0 1 N N N N N N 14.427 10.053 14.005 -0.775 -0.775 0.951 H24 UUO 71 UUO H25 H21 H 0 1 N N N N N N 14.102 11.375 12.833 -0.495 0.273 -0.460 H25 UUO 72 UUO H26 H22 H 0 1 N N N N N N 12.386 9.681 13.138 -0.369 -3.204 0.721 H26 UUO 73 UUO H27 H23 H 0 1 N N N N N N 12.195 8.886 11.538 1.325 -2.662 0.663 H27 UUO 74 UUO H28 H24 H 0 1 N N N N N N 13.888 7.354 13.376 -0.113 -4.379 -1.408 H28 UUO 75 UUO H29 H25 H 0 1 N N N N N N 12.239 7.648 14.024 1.539 -3.744 -1.597 H29 UUO 76 UUO H30 H26 H 0 1 N N N N N N 12.188 5.569 12.844 2.232 -4.933 0.466 H30 UUO 77 UUO H31 H27 H 0 1 N N N N N N 11.317 6.780 11.843 0.580 -5.568 0.655 H31 UUO 78 UUO H32 H28 H 0 1 N N N N N N 14.460 5.586 9.359 2.148 -8.041 -2.339 H32 UUO 79 UUO H34 H29 H 0 1 N N N N N N 13.396 9.274 10.083 -1.017 -2.797 -2.195 H34 UUO 80 UUO H33 H30 H 0 1 N N N N N N 13.809 10.944 10.597 -1.505 -1.098 -1.987 H33 UUO 81 UUO H4 H31 H 0 1 N N N N N N 16.204 10.391 10.481 -1.947 -3.295 0.089 H4 UUO 82 UUO H5 H32 H 0 1 N N N N N N 17.908 8.528 9.492 -4.222 -2.223 1.412 H5 UUO 83 UUO H6 H33 H 0 1 N N N N N N 16.491 8.958 6.964 -4.772 -0.980 -1.342 H6 UUO 84 UUO H7 H34 H 0 1 N N N N N N 14.572 9.760 7.984 -3.427 -2.629 -2.338 H7 UUO 85 UUO H37 H35 H 0 1 N N N N N N 14.987 6.662 7.722 -3.134 1.240 0.266 H37 UUO 86 UUO H38 H36 H 0 1 N N N N N N 21.167 5.515 8.962 -8.322 -0.929 3.550 H38 UUO 87 UUO H40 H37 H 0 1 N N N N N N 19.275 2.335 6.792 -6.417 3.903 2.608 H40 UUO 88 UUO H39 H38 H 0 1 N N N N N N 17.727 2.350 7.312 -7.804 3.602 3.507 H39 UUO 89 UUO H23 H39 H 0 1 N N N N N N 22.195 14.635 10.934 4.628 0.707 5.589 H23 UUO 90 UUO H22 H40 H 0 1 N N N N N N 20.825 14.021 10.290 6.140 1.141 6.178 H22 UUO 91 UUO H19 H42 H 0 1 N N N N N N 18.397 9.755 17.157 6.004 -1.959 -1.711 H19 UUO 92 UUO H36 H43 H 0 1 N N N N N N 14.808 11.986 8.638 -4.753 -4.437 -1.450 H36 UUO 93 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UUO N C SING N N 1 UUO C C1 SING N N 2 UUO C1 C2 SING N N 3 UUO C2 C3 SING N N 4 UUO C3 O DOUB N N 5 UUO N1 C3 SING N N 6 UUO C4 N1 SING N N 7 UUO C5 C4 SING N N 8 UUO C5 O1 SING N N 9 UUO O1 C6 SING N N 10 UUO C6 C7 SING N N 11 UUO O2 C7 SING N N 12 UUO C7 C8 SING N N 13 UUO C8 C5 SING N N 14 UUO O3 C8 SING N N 15 UUO N2 C6 SING N N 16 UUO N2 C9 SING Y N 17 UUO C9 N3 DOUB Y N 18 UUO N3 C10 SING Y N 19 UUO C10 C11 DOUB Y N 20 UUO C11 N2 SING Y N 21 UUO N4 C11 SING Y N 22 UUO C12 N4 DOUB Y N 23 UUO N5 C12 SING Y N 24 UUO C13 N5 DOUB Y N 25 UUO C10 C13 SING Y N 26 UUO N6 C13 SING N N 27 UUO C14 C9 SING N N 28 UUO C15 C14 TRIP N N 29 UUO C16 C15 SING N N 30 UUO N7 C16 SING N N 31 UUO C17 N7 SING N N 32 UUO C18 C17 SING N N 33 UUO C19 C18 SING N N 34 UUO C20 C19 SING N N 35 UUO C21 C20 TRIP N N 36 UUO C22 N7 SING N N 37 UUO C23 C22 SING N N 38 UUO C23 O4 SING N N 39 UUO O4 C24 SING N N 40 UUO C24 C25 SING N N 41 UUO O5 C25 SING N N 42 UUO C25 C26 SING N N 43 UUO C26 C23 SING N N 44 UUO O6 C26 SING N N 45 UUO N8 C24 SING N N 46 UUO N8 C27 SING Y N 47 UUO C27 N9 DOUB Y N 48 UUO N9 C28 SING Y N 49 UUO C28 C29 DOUB Y N 50 UUO C29 N8 SING Y N 51 UUO N10 C29 SING Y N 52 UUO C30 N10 DOUB Y N 53 UUO N11 C30 SING Y N 54 UUO C31 N11 DOUB Y N 55 UUO C28 C31 SING Y N 56 UUO N12 C31 SING N N 57 UUO N1 H16 SING N N 58 UUO C7 H2 SING N N 59 UUO C8 H3 SING N N 60 UUO C1 H13 SING N N 61 UUO C1 H12 SING N N 62 UUO O5 H35 SING N N 63 UUO C5 H SING N N 64 UUO C6 H1 SING N N 65 UUO C4 H18 SING N N 66 UUO C4 H17 SING N N 67 UUO O3 H20 SING N N 68 UUO C2 H15 SING N N 69 UUO C2 H14 SING N N 70 UUO N H8 SING N N 71 UUO N H9 SING N N 72 UUO C H10 SING N N 73 UUO C H11 SING N N 74 UUO C12 H21 SING N N 75 UUO C16 H24 SING N N 76 UUO C16 H25 SING N N 77 UUO C17 H26 SING N N 78 UUO C17 H27 SING N N 79 UUO C18 H28 SING N N 80 UUO C18 H29 SING N N 81 UUO C19 H30 SING N N 82 UUO C19 H31 SING N N 83 UUO C21 H32 SING N N 84 UUO C22 H34 SING N N 85 UUO C22 H33 SING N N 86 UUO C23 H4 SING N N 87 UUO C24 H5 SING N N 88 UUO C25 H6 SING N N 89 UUO C26 H7 SING N N 90 UUO C27 H37 SING N N 91 UUO C30 H38 SING N N 92 UUO N12 H40 SING N N 93 UUO N12 H39 SING N N 94 UUO N6 H23 SING N N 95 UUO N6 H22 SING N N 96 UUO O2 H19 SING N N 97 UUO O6 H36 SING N N 98 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UUO InChI InChI 1.06 "InChI=1S/C32H41N13O7/c1-2-3-4-10-43(13-18-24(48)25(49)31(52-18)44-16-41-21-27(34)37-14-39-29(21)44)11-6-7-19-42-22-28(35)38-15-40-30(22)45(19)32-26(50)23(47)17(51-32)12-36-20(46)8-5-9-33/h1,14-18,23-26,31-32,47-50H,3-5,8-13,33H2,(H,36,46)(H2,34,37,39)(H2,35,38,40)/t17-,18+,23-,24-,25-,26-,31+,32+/m1/s1" UUO InChIKey InChI 1.06 VMWKFAZDSDSDGH-ZHQRKLEFSA-N UUO SMILES_CANONICAL CACTVS 3.385 "NCCCC(=O)NC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2c(nc3c(N)ncnc23)C#CCN(CCCC#C)C[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56" UUO SMILES CACTVS 3.385 "NCCCC(=O)NC[CH]1O[CH]([CH](O)[CH]1O)n2c(nc3c(N)ncnc23)C#CCN(CCCC#C)C[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56" UUO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C#CCCCN(CC#Cc1nc2c(ncnc2n1[C@H]3[C@@H]([C@@H]([C@H](O3)CNC(=O)CCCN)O)O)N)C[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O" UUO SMILES "OpenEye OEToolkits" 2.0.7 "C#CCCCN(CC#Cc1nc2c(ncnc2n1C3C(C(C(O3)CNC(=O)CCCN)O)O)N)CC4C(C(C(O4)n5cnc6c5ncnc6N)O)O" # _pdbx_chem_comp_identifier.comp_id UUO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[8-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-pent-4-ynyl-amino]prop-1-ynyl]-6-azanyl-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-4-azanyl-butanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UUO "Create component" 2023-09-07 PDBE UUO "Initial release" 2025-03-19 RCSB #