data_UVI # _chem_comp.id UVI _chem_comp.name "~{N}-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[3-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]prop-2-ynyl]amino]propyl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H36 N12 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-07 _chem_comp.pdbx_modified_date 2025-03-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 668.661 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UVI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QGK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UVI N1 N1 N 0 1 N N N N N N 13.957 9.521 11.985 -0.599 -1.370 -0.221 N1 UVI 1 UVI C7 C1 C 0 1 N N N N N N 15.950 10.691 12.976 1.465 -0.170 -0.477 C7 UVI 2 UVI C8 C2 C 0 1 N N N N N N 14.487 10.484 12.956 0.470 -1.010 -1.163 C8 UVI 3 UVI N2 N2 N 0 1 Y N N N N N 16.992 7.029 8.361 -5.270 0.833 -0.029 N2 UVI 4 UVI C9 C3 C 0 1 N N N N N N 14.054 9.785 10.539 -1.725 -2.004 -0.920 C9 UVI 5 UVI O1 O1 O 0 1 N N N N N N 18.993 8.369 13.019 3.667 1.801 -2.131 O1 UVI 6 UVI C1 C4 C 0 1 N N R N N N 18.977 7.152 13.781 4.018 1.131 -3.353 C1 UVI 7 UVI O5 O2 O 0 1 N N N N N N 15.629 11.628 8.356 -4.648 -3.713 0.015 O5 UVI 8 UVI C5 C5 C 0 1 Y N N N N N 18.500 11.394 12.861 3.227 1.317 0.737 C5 UVI 9 UVI C6 C6 C 0 1 N N N N N N 17.119 10.949 12.958 2.259 0.500 0.070 C6 UVI 10 UVI N3 N3 N 0 1 Y N N N N N 16.312 5.232 7.192 -5.338 2.877 -0.792 N3 UVI 11 UVI C4 C7 C 0 1 N N S N N N 18.668 7.567 15.232 5.035 0.030 -2.996 C4 UVI 12 UVI O4 O3 O 0 1 N N N N N N 15.930 8.396 9.937 -3.341 -0.565 0.183 O4 UVI 13 UVI C3 C8 C 0 1 N N R N N N 18.785 9.102 15.211 5.250 0.191 -1.472 C3 UVI 14 UVI O3 O4 O 0 1 N N N N N N 19.596 9.602 16.268 6.628 0.032 -1.132 O3 UVI 15 UVI C2 C9 C 0 1 N N R N N N 19.545 9.300 13.910 4.786 1.651 -1.231 C2 UVI 16 UVI N4 N4 N 0 1 Y N N N N N 19.285 6.366 8.817 -7.514 0.909 1.059 N4 UVI 17 UVI N N5 N 0 1 Y N N N N N 19.551 10.613 13.302 4.360 1.834 0.158 N UVI 18 UVI C C10 C 0 1 N N N N N N 18.034 6.186 13.121 2.770 0.505 -3.979 C UVI 19 UVI O O5 O 0 1 N N N N N N 16.670 6.552 13.307 1.877 1.538 -4.397 O UVI 20 UVI C10 C11 C 0 1 N N R N N N 15.473 9.759 10.008 -2.975 -1.936 -0.041 C10 UVI 21 UVI C11 C12 C 0 1 N N R N N N 16.961 8.354 8.973 -4.783 -0.520 0.252 C11 UVI 22 UVI C12 C13 C 0 1 N N R N N N 16.708 9.499 7.977 -5.229 -1.503 -0.860 C12 UVI 23 UVI C13 C14 C 0 1 N N S N N N 15.485 10.224 8.557 -4.157 -2.615 -0.758 C13 UVI 24 UVI C14 C15 C 0 1 Y N N N N N 15.980 6.400 7.685 -4.614 1.796 -0.735 C14 UVI 25 UVI C15 C16 C 0 1 Y N N N N N 17.636 5.078 7.576 -6.502 2.675 -0.130 C15 UVI 26 UVI C16 C17 C 0 1 Y N N N N N 18.068 6.178 8.298 -6.474 1.360 0.366 C16 UVI 27 UVI C17 C18 C 0 1 Y N N N N N 20.085 5.331 8.552 -8.558 1.679 1.280 C17 UVI 28 UVI C18 C19 C 0 1 Y N N N N N 18.572 4.049 7.363 -7.637 3.460 0.135 C18 UVI 29 UVI C19 C20 C 0 1 N N N N N N 14.204 8.111 12.331 -0.088 -2.236 0.849 C19 UVI 30 UVI C20 C21 C 0 1 N N N N N N 13.136 7.128 11.848 0.380 -3.564 0.250 C20 UVI 31 UVI C21 C22 C 0 1 N N N N N N 13.163 6.794 10.357 1.036 -4.413 1.341 C21 UVI 32 UVI C22 C23 C 0 1 N N N N N N 13.393 4.446 9.752 2.095 -6.597 1.548 C22 UVI 33 UVI C23 C24 C 0 1 N N N N N N 12.879 3.501 8.703 2.557 -7.905 0.958 C23 UVI 34 UVI C24 C25 C 0 1 Y N N N N N 20.293 12.455 12.362 4.243 2.450 2.291 C24 UVI 35 UVI C25 C26 C 0 1 Y N N N N N 20.702 11.288 12.977 5.019 2.555 1.123 C25 UVI 36 UVI C26 C27 C 0 1 Y N N N N N 22.831 11.729 12.617 6.528 3.861 2.264 C26 UVI 37 UVI C27 C28 C 0 1 Y N N N N N 21.305 13.291 11.855 4.696 3.108 3.450 C27 UVI 38 UVI N10 N6 N 0 1 Y N N N N N 22.587 12.891 12.007 5.834 3.791 3.386 N10 UVI 39 UVI N11 N7 N 0 1 N N N N N N 21.073 14.429 11.207 3.971 3.049 4.627 N11 UVI 40 UVI N5 N8 N 0 1 Y N N N N N 19.813 4.214 7.871 -8.631 2.921 0.835 N5 UVI 41 UVI N6 N9 N 0 1 N N N N N N 18.291 2.918 6.717 -7.722 4.761 -0.327 N6 UVI 42 UVI N7 N10 N 0 1 N N N N N N 12.613 5.486 10.038 1.485 -5.684 0.767 N7 UVI 43 UVI N8 N11 N 0 1 Y N N N N N 18.899 12.529 12.300 3.165 1.691 1.994 N8 UVI 44 UVI N9 N12 N 0 1 Y N N N N N 21.961 10.866 13.139 6.143 3.264 1.156 N9 UVI 45 UVI O2 O6 O 0 1 N N N N N N 19.634 6.993 16.109 6.262 0.235 -3.699 O2 UVI 46 UVI O6 O7 O 0 1 N N N N N N 17.860 10.337 7.937 -6.532 -2.023 -0.588 O6 UVI 47 UVI O7 O8 O 0 1 N N N N N N 14.510 4.319 10.254 2.273 -6.367 2.726 O7 UVI 48 UVI H11 H2 H 0 1 N N N N N N 14.188 10.142 13.958 0.951 -1.916 -1.530 H11 UVI 49 UVI H12 H3 H 0 1 N N N N N N 14.019 11.457 12.746 0.045 -0.458 -2.001 H12 UVI 50 UVI H13 H4 H 0 1 N N N N N N 13.470 9.020 10.007 -1.912 -1.480 -1.858 H13 UVI 51 UVI H14 H5 H 0 1 N N N N N N 13.626 10.778 10.338 -1.482 -3.046 -1.128 H14 UVI 52 UVI H H6 H 0 1 N N N N N N 19.984 6.709 13.768 4.468 1.840 -4.048 H UVI 53 UVI H17 H7 H 0 1 N N N N N N 14.873 12.079 8.714 -5.429 -4.141 -0.361 H17 UVI 54 UVI H8 H8 H 0 1 N N N N N N 17.644 7.269 15.501 4.625 -0.955 -3.222 H8 UVI 55 UVI H7 H9 H 0 1 N N N N N N 17.792 9.575 15.172 4.629 -0.511 -0.915 H7 UVI 56 UVI H10 H10 H 0 1 N N N N N N 19.143 9.490 17.095 6.989 -0.840 -1.348 H10 UVI 57 UVI H1 H11 H 0 1 N N N N N N 20.590 9.016 14.104 5.581 2.353 -1.486 H1 UVI 58 UVI H5 H12 H 0 1 N N N N N N 18.194 5.186 13.550 3.059 -0.096 -4.841 H5 UVI 59 UVI H6 H13 H 0 1 N N N N N N 18.250 6.161 12.043 2.274 -0.129 -3.244 H6 UVI 60 UVI H4 H14 H 0 1 N N N N N N 16.110 5.917 12.876 1.062 1.213 -4.804 H4 UVI 61 UVI H2 H15 H 0 1 N N N N N N 16.135 10.385 10.624 -2.784 -2.430 0.913 H2 UVI 62 UVI H3 H16 H 0 1 N N N N N N 17.928 8.541 9.462 -5.131 -0.857 1.228 H3 UVI 63 UVI H15 H17 H 0 1 N N N N N N 16.468 9.089 6.985 -5.199 -1.023 -1.838 H15 UVI 64 UVI H16 H18 H 0 1 N N N N N N 14.579 9.855 8.054 -3.861 -2.952 -1.751 H16 UVI 65 UVI H19 H19 H 0 1 N N N N N N 14.996 6.829 7.569 -3.638 1.681 -1.182 H19 UVI 66 UVI H20 H20 H 0 1 N N N N N N 21.090 5.407 8.941 -9.387 1.281 1.847 H20 UVI 67 UVI H23 H21 H 0 1 N N N N N N 15.166 7.815 11.887 0.749 -1.746 1.345 H23 UVI 68 UVI H24 H22 H 0 1 N N N N N N 14.267 8.035 13.427 -0.880 -2.424 1.574 H24 UVI 69 UVI H25 H23 H 0 1 N N N N N N 13.265 6.189 12.406 -0.475 -4.099 -0.162 H25 UVI 70 UVI H26 H24 H 0 1 N N N N N N 12.151 7.560 12.079 1.103 -3.370 -0.543 H26 UVI 71 UVI H28 H25 H 0 1 N N N N N N 12.579 7.556 9.820 1.892 -3.878 1.752 H28 UVI 72 UVI H27 H26 H 0 1 N N N N N N 14.208 6.824 10.014 0.314 -4.607 2.134 H27 UVI 73 UVI H30 H27 H 0 1 N N N N N N 13.641 2.736 8.493 1.757 -8.641 1.036 H30 UVI 74 UVI H31 H28 H 0 1 N N N N N N 11.962 3.014 9.066 2.815 -7.759 -0.091 H31 UVI 75 UVI H32 H29 H 0 1 N N N N N N 12.658 4.061 7.782 3.432 -8.260 1.502 H32 UVI 76 UVI H33 H30 H 0 1 N N N N N N 23.872 11.452 12.698 7.447 4.427 2.257 H33 UVI 77 UVI H34 H31 H 0 1 N N N N N N 21.942 14.832 10.918 3.139 2.550 4.660 H34 UVI 78 UVI H35 H32 H 0 1 N N N N N N 20.507 14.245 10.403 4.294 3.506 5.419 H35 UVI 79 UVI H21 H33 H 0 1 N N N N N N 19.099 2.328 6.709 -6.993 5.142 -0.841 H21 UVI 80 UVI H22 H34 H 0 1 N N N N N N 17.540 2.448 7.180 -8.511 5.293 -0.138 H22 UVI 81 UVI H29 H35 H 0 1 N N N N N N 11.620 5.364 10.033 1.342 -5.868 -0.174 H29 UVI 82 UVI H9 H36 H 0 1 N N N N N N 19.543 6.047 16.106 6.174 0.203 -4.662 H9 UVI 83 UVI H18 H37 H 0 1 N N N N N N 17.714 11.048 7.324 -6.855 -2.643 -1.256 H18 UVI 84 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UVI O C SING N N 1 UVI C C1 SING N N 2 UVI C1 O1 SING N N 3 UVI O1 C2 SING N N 4 UVI C3 C2 SING N N 5 UVI C4 C3 SING N N 6 UVI C1 C4 SING N N 7 UVI O2 C4 SING N N 8 UVI O3 C3 SING N N 9 UVI C2 N SING N N 10 UVI N C5 SING Y N 11 UVI C5 C6 SING N N 12 UVI C6 C7 TRIP N N 13 UVI C7 C8 SING N N 14 UVI C8 N1 SING N N 15 UVI C9 N1 SING N N 16 UVI C10 C9 SING N N 17 UVI C10 O4 SING N N 18 UVI O4 C11 SING N N 19 UVI C11 C12 SING N N 20 UVI C12 C13 SING N N 21 UVI C13 C10 SING N N 22 UVI O5 C13 SING N N 23 UVI O6 C12 SING N N 24 UVI N2 C11 SING N N 25 UVI N2 C14 SING Y N 26 UVI C14 N3 DOUB Y N 27 UVI N3 C15 SING Y N 28 UVI C15 C16 DOUB Y N 29 UVI C16 N2 SING Y N 30 UVI N4 C16 SING Y N 31 UVI C17 N4 DOUB Y N 32 UVI N5 C17 SING Y N 33 UVI C18 N5 DOUB Y N 34 UVI C15 C18 SING Y N 35 UVI N6 C18 SING N N 36 UVI N1 C19 SING N N 37 UVI C19 C20 SING N N 38 UVI C20 C21 SING N N 39 UVI C21 N7 SING N N 40 UVI N7 C22 SING N N 41 UVI C22 O7 DOUB N N 42 UVI C23 C22 SING N N 43 UVI N8 C5 DOUB Y N 44 UVI C24 N8 SING Y N 45 UVI C24 C25 DOUB Y N 46 UVI N C25 SING Y N 47 UVI C25 N9 SING Y N 48 UVI N9 C26 DOUB Y N 49 UVI C26 N10 SING Y N 50 UVI N10 C27 DOUB Y N 51 UVI C27 C24 SING Y N 52 UVI N11 C27 SING N N 53 UVI C8 H11 SING N N 54 UVI C8 H12 SING N N 55 UVI C9 H13 SING N N 56 UVI C9 H14 SING N N 57 UVI C1 H SING N N 58 UVI O5 H17 SING N N 59 UVI C4 H8 SING N N 60 UVI C3 H7 SING N N 61 UVI O3 H10 SING N N 62 UVI C2 H1 SING N N 63 UVI C H5 SING N N 64 UVI C H6 SING N N 65 UVI O H4 SING N N 66 UVI C10 H2 SING N N 67 UVI C11 H3 SING N N 68 UVI C12 H15 SING N N 69 UVI C13 H16 SING N N 70 UVI C14 H19 SING N N 71 UVI C17 H20 SING N N 72 UVI C19 H23 SING N N 73 UVI C19 H24 SING N N 74 UVI C20 H25 SING N N 75 UVI C20 H26 SING N N 76 UVI C21 H28 SING N N 77 UVI C21 H27 SING N N 78 UVI C23 H30 SING N N 79 UVI C23 H31 SING N N 80 UVI C23 H32 SING N N 81 UVI C26 H33 SING N N 82 UVI N11 H34 SING N N 83 UVI N11 H35 SING N N 84 UVI N6 H21 SING N N 85 UVI N6 H22 SING N N 86 UVI N7 H29 SING N N 87 UVI O2 H9 SING N N 88 UVI O6 H18 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UVI InChI InChI 1.06 "InChI=1S/C28H36N12O8/c1-13(42)31-5-3-7-38(8-14-19(43)21(45)27(47-14)39-12-36-17-23(29)32-10-34-25(17)39)6-2-4-16-37-18-24(30)33-11-35-26(18)40(16)28-22(46)20(44)15(9-41)48-28/h10-12,14-15,19-22,27-28,41,43-46H,3,5-9H2,1H3,(H,31,42)(H2,29,32,34)(H2,30,33,35)/t14-,15-,19-,20-,21-,22-,27-,28-/m1/s1" UVI InChIKey InChI 1.06 WIQFBUDBEHSDTI-VYHVXXRISA-N UVI SMILES_CANONICAL CACTVS 3.385 "CC(=O)NCCCN(CC#Cc1nc2c(N)ncnc2n1[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)C[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56" UVI SMILES CACTVS 3.385 "CC(=O)NCCCN(CC#Cc1nc2c(N)ncnc2n1[CH]3O[CH](CO)[CH](O)[CH]3O)C[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56" UVI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)NCCCN(CC#Cc1nc2c(ncnc2n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)N)C[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O" UVI SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NCCCN(CC#Cc1nc2c(ncnc2n1C3C(C(C(O3)CO)O)O)N)CC4C(C(C(O4)n5cnc6c5ncnc6N)O)O" # _pdbx_chem_comp_identifier.comp_id UVI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[3-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]prop-2-ynyl]amino]propyl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UVI "Create component" 2023-09-07 PDBE UVI "Initial release" 2025-03-19 RCSB #