data_UX3 # _chem_comp.id UX3 _chem_comp.name "3-ethyl-7-[(4-phenylphenyl)methyl]-8-(5,6,7,8-tetrahydroimidazo[1,2-a]pyridin-2-ylmethyl)purine-2,6-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H28 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-14 _chem_comp.pdbx_modified_date 2024-01-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 480.561 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UX3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8CJN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UX3 C4 C1 C 0 1 Y N N N N N -19.752 10.158 -17.612 -1.236 2.324 0.468 C4 UX3 1 UX3 C5 C2 C 0 1 Y N N N N N -20.345 9.026 -17.194 -0.546 1.869 -0.649 C5 UX3 2 UX3 C6 C3 C 0 1 N N N N N N -21.651 8.813 -17.446 -0.092 2.803 -1.605 C6 UX3 3 UX3 C8 C4 C 0 1 Y N N N N N -18.275 8.990 -16.615 -1.102 0.171 0.622 C8 UX3 4 UX3 N1 N1 N 0 1 N N N N N N -22.379 9.773 -18.143 -0.338 4.116 -1.412 N1 UX3 5 UX3 N3 N2 N 0 1 N N N N N N -20.431 11.095 -18.284 -1.462 3.684 0.606 N3 UX3 6 UX3 CAG C5 C 0 1 Y N N N N N -19.621 1.321 -18.841 6.612 -0.497 -0.221 CAG UX3 7 UX3 CAE C6 C 0 1 Y N N N N N -19.652 0.190 -19.652 7.915 -0.729 0.171 CAE UX3 8 UX3 CAD C7 C 0 1 Y N N N N N -19.861 0.325 -21.020 8.222 -1.839 0.937 CAD UX3 9 UX3 CAF C8 C 0 1 Y N N N N N -20.034 1.590 -21.572 7.226 -2.722 1.314 CAF UX3 10 UX3 CAH C9 C 0 1 Y N N N N N -20.000 2.721 -20.760 5.920 -2.499 0.928 CAH UX3 11 UX3 CAZ C10 C 0 1 Y N N N N N -19.803 2.588 -19.389 5.604 -1.380 0.161 CAZ UX3 12 UX3 CBA C11 C 0 1 Y N N N N N -19.752 3.701 -18.550 4.202 -1.136 -0.259 CBA UX3 13 UX3 CAL C12 C 0 1 Y N N N N N -19.424 4.961 -19.046 3.195 -2.022 0.119 CAL UX3 14 UX3 CAJ C13 C 0 1 Y N N N N N -19.360 6.053 -18.179 1.892 -1.789 -0.273 CAJ UX3 15 UX3 CAK C14 C 0 1 Y N N N N N -20.009 3.538 -17.194 3.886 -0.016 -1.026 CAK UX3 16 UX3 CAI C15 C 0 1 Y N N N N N -19.950 4.628 -16.332 2.580 0.206 -1.412 CAI UX3 17 UX3 CAX C16 C 0 1 Y N N N N N -19.626 5.890 -16.820 1.585 -0.680 -1.039 CAX UX3 18 UX3 CAT C17 C 0 1 N N N N N N -19.570 6.959 -15.913 0.161 -0.432 -1.465 CAT UX3 19 UX3 N7 N3 N 0 1 Y N N N N N -19.409 8.291 -16.568 -0.475 0.496 -0.526 N7 UX3 20 UX3 O6 O1 O 0 1 N N N N N N -22.238 7.791 -17.079 0.515 2.428 -2.592 O6 UX3 21 UX3 C2 C18 C 0 1 N N N N N N -21.725 10.930 -18.563 -1.007 4.542 -0.327 C2 UX3 22 UX3 O2 O2 O 0 1 N N N N N N -22.325 11.806 -19.182 -1.214 5.733 -0.189 O2 UX3 23 UX3 CAP C19 C 0 1 N N N N N N -19.744 12.327 -18.727 -2.192 4.190 1.771 CAP UX3 24 UX3 CAA C20 C 0 1 N N N N N N -19.877 13.430 -17.672 -1.204 4.499 2.897 CAA UX3 25 UX3 N9 N4 N 0 1 Y N N N N N -18.470 10.135 -17.250 -1.548 1.254 1.204 N9 UX3 26 UX3 CAS C21 C 0 1 N N N N N N -16.935 8.556 -16.005 -1.263 -1.230 1.155 CAS UX3 27 UX3 CAY C22 C 0 1 Y N N N N N -15.864 8.168 -17.039 -2.602 -1.777 0.732 CAY UX3 28 UX3 NAU N5 N 0 1 Y N N N N N -14.586 8.004 -16.708 -3.796 -1.208 0.963 NAU UX3 29 UX3 CBB C23 C 0 1 Y N N N N N -13.919 7.670 -17.807 -4.732 -1.955 0.455 CBB UX3 30 UX3 CAQ C24 C 0 1 N N N N N N -12.550 7.386 -17.989 -6.220 -1.702 0.477 CAQ UX3 31 UX3 CAN C25 C 0 1 N N N N N N -12.143 7.535 -19.455 -6.878 -2.614 -0.566 CAN UX3 32 UX3 CAO C26 C 0 1 N N N N N N -13.072 6.663 -20.286 -6.361 -4.044 -0.384 CAO UX3 33 UX3 CAR C27 C 0 1 N N N N N N -14.460 7.286 -20.218 -4.886 -4.112 -0.798 CAR UX3 34 UX3 NBH N6 N 0 1 Y N N N N N -14.801 7.617 -18.814 -4.156 -3.037 -0.121 NBH UX3 35 UX3 CAM C28 C 0 1 Y N N N N N -16.022 7.932 -18.343 -2.809 -2.922 0.049 CAM UX3 36 UX3 H1 H1 H 0 1 N N N N N N -23.350 9.636 -18.338 -0.028 4.761 -2.066 H1 UX3 37 UX3 H2 H2 H 0 1 N N N N N N -19.455 1.215 -17.779 6.373 0.370 -0.820 H2 UX3 38 UX3 H3 H3 H 0 1 N N N N N N -19.514 -0.790 -19.220 8.696 -0.042 -0.121 H3 UX3 39 UX3 H4 H4 H 0 1 N N N N N N -19.889 -0.550 -21.652 9.242 -2.017 1.242 H4 UX3 40 UX3 H5 H5 H 0 1 N N N N N N -20.195 1.696 -22.635 7.471 -3.587 1.912 H5 UX3 41 UX3 H6 H6 H 0 1 N N N N N N -20.127 3.702 -21.195 5.144 -3.190 1.222 H6 UX3 42 UX3 H7 H7 H 0 1 N N N N N N -19.220 5.092 -20.098 3.434 -2.889 0.717 H7 UX3 43 UX3 H8 H8 H 0 1 N N N N N N -19.103 7.029 -18.563 1.111 -2.475 0.020 H8 UX3 44 UX3 H9 H9 H 0 1 N N N N N N -20.256 2.560 -16.808 4.662 0.676 -1.317 H9 UX3 45 UX3 H10 H10 H 0 1 N N N N N N -20.156 4.494 -15.280 2.334 1.073 -2.007 H10 UX3 46 UX3 H11 H11 H 0 1 N N N N N N -20.502 6.969 -15.329 0.151 0.001 -2.465 H11 UX3 47 UX3 H12 H12 H 0 1 N N N N N N -18.716 6.798 -15.238 -0.386 -1.375 -1.470 H12 UX3 48 UX3 H13 H13 H 0 1 N N N N N N -18.678 12.108 -18.888 -2.727 5.099 1.497 H13 UX3 49 UX3 H14 H14 H 0 1 N N N N N N -20.194 12.672 -19.669 -2.904 3.437 2.108 H14 UX3 50 UX3 H15 H15 H 0 1 N N N N N N -19.360 14.336 -18.021 -1.747 4.876 3.764 H15 UX3 51 UX3 H16 H16 H 0 1 N N N N N N -20.941 13.655 -17.509 -0.668 3.590 3.171 H16 UX3 52 UX3 H17 H17 H 0 1 N N N N N N -19.425 13.091 -16.728 -0.492 5.253 2.559 H17 UX3 53 UX3 H18 H18 H 0 1 N N N N N N -17.118 7.687 -15.356 -0.469 -1.863 0.759 H18 UX3 54 UX3 H19 H19 H 0 1 N N N N N N -16.545 9.389 -15.402 -1.205 -1.213 2.244 H19 UX3 55 UX3 H20 H20 H 0 1 N N N N N N -12.352 6.354 -17.665 -6.617 -1.930 1.467 H20 UX3 56 UX3 H21 H21 H 0 1 N N N N N N -11.955 8.082 -17.379 -6.420 -0.659 0.232 H21 UX3 57 UX3 H22 H22 H 0 1 N N N N N N -11.102 7.207 -19.590 -7.959 -2.599 -0.434 H22 UX3 58 UX3 H23 H23 H 0 1 N N N N N N -12.239 8.586 -19.765 -6.628 -2.261 -1.567 H23 UX3 59 UX3 H24 H24 H 0 1 N N N N N N -13.097 5.643 -19.876 -6.458 -4.335 0.663 H24 UX3 60 UX3 H25 H25 H 0 1 N N N N N N -12.725 6.631 -21.329 -6.944 -4.724 -1.005 H25 UX3 61 UX3 H26 H26 H 0 1 N N N N N N -14.477 8.205 -20.823 -4.469 -5.076 -0.507 H26 UX3 62 UX3 H27 H27 H 0 1 N N N N N N -15.199 6.573 -20.614 -4.804 -3.986 -1.877 H27 UX3 63 UX3 H28 H28 H 0 1 N N N N N N -16.942 7.983 -18.906 -2.054 -3.613 -0.294 H28 UX3 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UX3 CAF CAD DOUB Y N 1 UX3 CAF CAH SING Y N 2 UX3 CAD CAE SING Y N 3 UX3 CAH CAZ DOUB Y N 4 UX3 CAO CAR SING N N 5 UX3 CAO CAN SING N N 6 UX3 CAR NBH SING N N 7 UX3 CAE CAG DOUB Y N 8 UX3 CAN CAQ SING N N 9 UX3 CAZ CAG SING Y N 10 UX3 CAZ CBA SING N N 11 UX3 O2 C2 DOUB N N 12 UX3 CAL CBA DOUB Y N 13 UX3 CAL CAJ SING Y N 14 UX3 NBH CAM SING Y N 15 UX3 NBH CBB SING Y N 16 UX3 CAP N3 SING N N 17 UX3 CAP CAA SING N N 18 UX3 C2 N3 SING N N 19 UX3 C2 N1 SING N N 20 UX3 CBA CAK SING Y N 21 UX3 CAM CAY DOUB Y N 22 UX3 N3 C4 SING N N 23 UX3 CAJ CAX DOUB Y N 24 UX3 N1 C6 SING N N 25 UX3 CAQ CBB SING N N 26 UX3 CBB NAU DOUB Y N 27 UX3 C4 N9 SING Y N 28 UX3 C4 C5 DOUB Y N 29 UX3 C6 C5 SING N N 30 UX3 C6 O6 DOUB N N 31 UX3 N9 C8 DOUB Y N 32 UX3 CAK CAI DOUB Y N 33 UX3 C5 N7 SING Y N 34 UX3 CAY NAU SING Y N 35 UX3 CAY CAS SING N N 36 UX3 CAX CAI SING Y N 37 UX3 CAX CAT SING N N 38 UX3 C8 N7 SING Y N 39 UX3 C8 CAS SING N N 40 UX3 N7 CAT SING N N 41 UX3 N1 H1 SING N N 42 UX3 CAG H2 SING N N 43 UX3 CAE H3 SING N N 44 UX3 CAD H4 SING N N 45 UX3 CAF H5 SING N N 46 UX3 CAH H6 SING N N 47 UX3 CAL H7 SING N N 48 UX3 CAJ H8 SING N N 49 UX3 CAK H9 SING N N 50 UX3 CAI H10 SING N N 51 UX3 CAT H11 SING N N 52 UX3 CAT H12 SING N N 53 UX3 CAP H13 SING N N 54 UX3 CAP H14 SING N N 55 UX3 CAA H15 SING N N 56 UX3 CAA H16 SING N N 57 UX3 CAA H17 SING N N 58 UX3 CAS H18 SING N N 59 UX3 CAS H19 SING N N 60 UX3 CAQ H20 SING N N 61 UX3 CAQ H21 SING N N 62 UX3 CAN H22 SING N N 63 UX3 CAN H23 SING N N 64 UX3 CAO H24 SING N N 65 UX3 CAO H25 SING N N 66 UX3 CAR H26 SING N N 67 UX3 CAR H27 SING N N 68 UX3 CAM H28 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UX3 InChI InChI 1.06 "InChI=1S/C28H28N6O2/c1-2-33-26-25(27(35)31-28(33)36)34(17-19-11-13-21(14-12-19)20-8-4-3-5-9-20)24(30-26)16-22-18-32-15-7-6-10-23(32)29-22/h3-5,8-9,11-14,18H,2,6-7,10,15-17H2,1H3,(H,31,35,36)" UX3 InChIKey InChI 1.06 ADTIQGKCZQHSQW-UHFFFAOYSA-N UX3 SMILES_CANONICAL CACTVS 3.385 "CCN1C(=O)NC(=O)c2n(Cc3ccc(cc3)c4ccccc4)c(Cc5cn6CCCCc6n5)nc12" UX3 SMILES CACTVS 3.385 "CCN1C(=O)NC(=O)c2n(Cc3ccc(cc3)c4ccccc4)c(Cc5cn6CCCCc6n5)nc12" UX3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN1c2c(n(c(n2)Cc3cn4c(n3)CCCC4)Cc5ccc(cc5)c6ccccc6)C(=O)NC1=O" UX3 SMILES "OpenEye OEToolkits" 2.0.7 "CCN1c2c(n(c(n2)Cc3cn4c(n3)CCCC4)Cc5ccc(cc5)c6ccccc6)C(=O)NC1=O" # _pdbx_chem_comp_identifier.comp_id UX3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-ethyl-7-[(4-phenylphenyl)methyl]-8-(5,6,7,8-tetrahydroimidazo[1,2-a]pyridin-2-ylmethyl)purine-2,6-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UX3 "Create component" 2023-02-14 PDBE UX3 "Initial release" 2024-01-10 RCSB #