data_UYM # _chem_comp.id UYM _chem_comp.name "(3S,6S)-3,6-bis[(1H-indol-3-yl)methyl]piperazine-2,5-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H20 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-06-05 _chem_comp.pdbx_modified_date 2021-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 372.420 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UYM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6XAK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UYM N N1 N 0 1 Y N N -18.719 40.004 -21.316 4.992 1.834 -0.493 N UYM 1 UYM C C1 C 0 1 N N N -21.329 34.844 -21.295 -0.452 1.340 1.574 C UYM 2 UYM O O1 O 0 1 N N N -20.867 34.073 -22.091 -0.830 2.476 1.767 O UYM 3 UYM C1 C2 C 0 1 N N S -20.969 36.331 -21.427 1.009 1.100 1.341 C1 UYM 4 UYM C10 C3 C 0 1 Y N N -17.493 40.492 -23.621 5.880 -0.481 -1.057 C10 UYM 5 UYM C11 C4 C 0 1 N N S -22.838 35.177 -19.230 -1.001 -1.041 1.361 C11 UYM 6 UYM C12 C5 C 0 1 N N N -22.336 34.832 -17.798 -1.336 -1.430 -0.081 C12 UYM 7 UYM C15 C6 C 0 1 N N N -22.583 36.673 -19.448 0.461 -1.277 1.605 C15 UYM 8 UYM C2 C7 C 0 1 N N N -19.460 36.522 -21.232 1.350 1.450 -0.109 C2 UYM 9 UYM C3 C8 C 0 1 Y N N -19.002 37.993 -21.561 2.837 1.329 -0.319 C3 UYM 10 UYM C34 C9 C 0 1 Y N N -20.771 34.793 -17.624 -2.825 -1.334 -0.293 C34 UYM 11 UYM C35 C10 C 0 1 Y N N -20.190 33.686 -17.826 -3.713 -2.335 -0.188 C35 UYM 12 UYM C37 C11 C 0 1 Y N N -18.740 35.355 -17.212 -4.926 -0.525 -0.737 C37 UYM 13 UYM C38 C12 C 0 1 Y N N -20.063 35.780 -17.260 -3.579 -0.128 -0.648 C38 UYM 14 UYM C39 C13 C 0 1 Y N N -20.359 37.123 -16.935 -3.226 1.201 -0.887 C39 UYM 15 UYM C4 C14 C 0 1 Y N N -19.227 38.947 -20.706 3.738 2.322 -0.241 C4 UYM 16 UYM C40 C15 C 0 1 Y N N -19.320 38.006 -16.575 -4.193 2.112 -1.207 C40 UYM 17 UYM C41 C16 C 0 1 Y N N -18.001 37.564 -16.531 -5.524 1.726 -1.296 C41 UYM 18 UYM C42 C17 C 0 1 Y N N -17.699 36.238 -16.844 -5.894 0.420 -1.063 C42 UYM 19 UYM C5 C18 C 0 1 Y N N -18.132 39.782 -22.599 4.926 0.483 -0.750 C5 UYM 20 UYM C6 C19 C 0 1 Y N N -18.355 38.364 -22.722 3.573 0.108 -0.656 C6 UYM 21 UYM C7 C20 C 0 1 Y N N -17.919 37.730 -23.886 3.202 -1.220 -0.871 C7 UYM 22 UYM C8 C21 C 0 1 Y N N -17.278 38.437 -24.916 4.156 -2.151 -1.171 C8 UYM 23 UYM C9 C22 C 0 1 Y N N -17.058 39.832 -24.791 5.492 -1.786 -1.266 C9 UYM 24 UYM N1 N2 N 0 1 N N N -21.704 37.154 -20.491 1.363 -0.291 1.591 N1 UYM 25 UYM N2 N3 N 0 1 N N N -22.215 34.372 -20.249 -1.354 0.354 1.583 N2 UYM 26 UYM N36 N4 N 0 1 Y N N -18.809 33.907 -17.611 -4.973 -1.871 -0.451 N36 UYM 27 UYM O1 O2 O 0 1 N N N -23.128 37.449 -18.747 0.839 -2.408 1.825 O1 UYM 28 UYM H1 H1 H 0 1 N N N -18.744 40.913 -20.900 5.805 2.362 -0.493 H1 UYM 29 UYM H2 H2 H 0 1 N N N -21.218 36.647 -22.451 1.587 1.740 2.008 H2 UYM 30 UYM H3 H3 H 0 1 N N N -17.331 41.554 -23.514 6.922 -0.207 -1.133 H3 UYM 31 UYM H4 H4 H 0 1 N N N -23.925 35.011 -19.253 -1.581 -1.663 2.042 H4 UYM 32 UYM H5 H5 H 0 1 N N N -22.736 35.588 -17.106 -0.827 -0.753 -0.767 H5 UYM 33 UYM H6 H6 H 0 1 N N N -22.733 33.842 -17.528 -1.008 -2.452 -0.268 H6 UYM 34 UYM H7 H7 H 0 1 N N N -18.926 35.827 -21.896 0.831 0.766 -0.780 H7 UYM 35 UYM H8 H8 H 0 1 N N N -19.206 36.297 -20.186 1.035 2.473 -0.319 H8 UYM 36 UYM H9 H9 H 0 1 N N N -20.658 32.754 -18.108 -3.469 -3.355 0.068 H9 UYM 37 UYM H10 H10 H 0 1 N N N -21.380 37.473 -16.962 -2.193 1.508 -0.819 H10 UYM 38 UYM H11 H11 H 0 1 N N N -19.708 38.890 -19.741 3.507 3.352 -0.014 H11 UYM 39 UYM H12 H12 H 0 1 N N N -19.550 39.033 -16.332 -3.920 3.141 -1.391 H12 UYM 40 UYM H13 H13 H 0 1 N N N -17.211 38.247 -16.255 -6.277 2.458 -1.549 H13 UYM 41 UYM H14 H14 H 0 1 N N N -16.678 35.889 -16.805 -6.931 0.129 -1.135 H14 UYM 42 UYM H15 H15 H 0 1 N N N -18.079 36.668 -23.998 2.164 -1.512 -0.799 H15 UYM 43 UYM H16 H16 H 0 1 N N N -16.952 37.917 -25.805 3.869 -3.179 -1.337 H16 UYM 44 UYM H17 H17 H 0 1 N N N -16.565 40.382 -25.579 6.235 -2.533 -1.504 H17 UYM 45 UYM H18 H18 H 0 1 N N N -21.594 38.145 -20.573 2.294 -0.511 1.755 H18 UYM 46 UYM H19 H19 H 0 1 N N N -22.413 33.392 -20.233 -2.284 0.577 1.745 H19 UYM 47 UYM H20 H20 H 0 1 N N N -18.057 33.254 -17.703 -5.780 -2.409 -0.437 H20 UYM 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UYM C8 C9 DOUB Y N 1 UYM C8 C7 SING Y N 2 UYM C9 C10 SING Y N 3 UYM C7 C6 DOUB Y N 4 UYM C10 C5 DOUB Y N 5 UYM C6 C5 SING Y N 6 UYM C6 C3 SING Y N 7 UYM C5 N SING Y N 8 UYM O C DOUB N N 9 UYM C3 C2 SING N N 10 UYM C3 C4 DOUB Y N 11 UYM C1 C SING N N 12 UYM C1 C2 SING N N 13 UYM C1 N1 SING N N 14 UYM N C4 SING Y N 15 UYM C N2 SING N N 16 UYM N1 C15 SING N N 17 UYM N2 C11 SING N N 18 UYM C15 C11 SING N N 19 UYM C15 O1 DOUB N N 20 UYM C11 C12 SING N N 21 UYM C35 C34 DOUB Y N 22 UYM C35 N36 SING Y N 23 UYM C12 C34 SING N N 24 UYM C34 C38 SING Y N 25 UYM N36 C37 SING Y N 26 UYM C38 C37 DOUB Y N 27 UYM C38 C39 SING Y N 28 UYM C37 C42 SING Y N 29 UYM C39 C40 DOUB Y N 30 UYM C42 C41 DOUB Y N 31 UYM C40 C41 SING Y N 32 UYM N H1 SING N N 33 UYM C1 H2 SING N N 34 UYM C10 H3 SING N N 35 UYM C11 H4 SING N N 36 UYM C12 H5 SING N N 37 UYM C12 H6 SING N N 38 UYM C2 H7 SING N N 39 UYM C2 H8 SING N N 40 UYM C35 H9 SING N N 41 UYM C39 H10 SING N N 42 UYM C4 H11 SING N N 43 UYM C40 H12 SING N N 44 UYM C41 H13 SING N N 45 UYM C42 H14 SING N N 46 UYM C7 H15 SING N N 47 UYM C8 H16 SING N N 48 UYM C9 H17 SING N N 49 UYM N1 H18 SING N N 50 UYM N2 H19 SING N N 51 UYM N36 H20 SING N N 52 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UYM SMILES ACDLabs 12.01 "n4cc(CC3C(NC(Cc2c1c(cccc1)nc2)C(=O)N3)=O)c5c4cccc5" UYM InChI InChI 1.03 "InChI=1S/C22H20N4O2/c27-21-19(9-13-11-23-17-7-3-1-5-15(13)17)25-22(28)20(26-21)10-14-12-24-18-8-4-2-6-16(14)18/h1-8,11-12,19-20,23-24H,9-10H2,(H,25,28)(H,26,27)/t19-,20-/m0/s1" UYM InChIKey InChI 1.03 DNHODRZUCGXYKU-PMACEKPBSA-N UYM SMILES_CANONICAL CACTVS 3.385 "O=C1N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N[C@H]1Cc4c[nH]c5ccccc45" UYM SMILES CACTVS 3.385 "O=C1N[CH](Cc2c[nH]c3ccccc23)C(=O)N[CH]1Cc4c[nH]c5ccccc45" UYM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)C[C@H]3C(=O)N[C@H](C(=O)N3)Cc4c[nH]c5c4cccc5" UYM SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CC3C(=O)NC(C(=O)N3)Cc4c[nH]c5c4cccc5" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier UYM "SYSTEMATIC NAME" ACDLabs 12.01 "(3S,6S)-3,6-bis[(1H-indol-3-yl)methyl]piperazine-2,5-dione" UYM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S},6~{S})-3,6-bis(1~{H}-indol-3-ylmethyl)piperazine-2,5-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UYM "Create component" 2020-06-05 RCSB UYM "Initial release" 2021-06-09 RCSB ##