data_V00 # _chem_comp.id V00 _chem_comp.name "~{N}-[(3-fluorophenyl)methyl]-1-[(1~{R})-1-(3-methoxynaphthalen-1-yl)ethyl]piperidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H29 F N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-30 _chem_comp.pdbx_modified_date 2024-06-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 420.519 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V00 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8JUX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V00 C01 C1 C 0 1 N N N N N N 34.571 0.162 106.881 3.467 4.002 2.104 C01 V00 1 V00 O02 O1 O 0 1 N N N N N N 33.582 0.246 105.889 2.903 2.693 2.013 O02 V00 2 V00 C03 C2 C 0 1 Y N N N N N 32.671 -0.812 105.926 3.481 1.832 1.135 C03 V00 3 V00 C04 C3 C 0 1 Y N N N N N 31.497 -0.750 105.171 2.969 0.538 0.998 C04 V00 4 V00 C05 C4 C 0 1 Y N N N N N 30.589 -1.815 105.183 3.526 -0.347 0.128 C05 V00 5 V00 C06 C5 C 0 1 N N R N N N 29.284 -1.734 104.337 2.959 -1.737 -0.005 C06 V00 6 V00 C07 C6 C 0 1 N N N N N N 28.772 -0.288 104.268 3.739 -2.694 0.898 C07 V00 7 V00 N08 N1 N 0 1 N N N N N N 29.293 -2.219 103.194 1.545 -1.729 0.395 N08 V00 8 V00 C09 C7 C 0 1 N N N N N N 28.319 -3.279 103.060 0.958 -3.070 0.278 C09 V00 9 V00 C10 C8 C 0 1 N N N N N N 28.313 -3.993 101.697 -0.466 -3.055 0.837 C10 V00 10 V00 C11 C9 C 0 1 N N N N N N 29.648 -4.379 101.326 -1.306 -2.040 0.057 C11 V00 11 V00 C12 C10 C 0 1 N N N N N N 29.712 -5.179 100.008 -2.694 -1.979 0.641 C12 V00 12 V00 O13 O2 O 0 1 N N N N N N 29.812 -4.623 98.962 -2.984 -2.678 1.589 O13 V00 13 V00 N14 N2 N 0 1 N N N N N N 29.672 -6.640 100.054 -3.612 -1.147 0.110 N14 V00 14 V00 C15 C11 C 0 1 N N N N N N 29.751 -7.444 98.838 -4.961 -1.087 0.678 C15 V00 15 V00 C16 C12 C 0 1 Y N N N N N 31.169 -8.021 98.706 -5.786 -0.088 -0.091 C16 V00 16 V00 C17 C13 C 0 1 Y N N N N N 32.278 -7.216 98.939 -6.517 -0.496 -1.191 C17 V00 17 V00 C18 C14 C 0 1 Y N N N N N 33.563 -7.739 98.828 -7.274 0.419 -1.898 C18 V00 18 V00 C19 C15 C 0 1 Y N N N N N 33.746 -9.072 98.484 -7.301 1.744 -1.505 C19 V00 19 V00 C20 C16 C 0 1 Y N N N N N 32.637 -9.875 98.251 -6.569 2.154 -0.404 C20 V00 20 V00 C22 C17 C 0 1 Y N N N N N 31.351 -9.355 98.364 -5.816 1.235 0.307 C22 V00 21 V00 C23 C18 C 0 1 N N N N N N 30.479 -3.206 101.240 -0.646 -0.662 0.154 C23 V00 22 V00 C24 C19 C 0 1 N N N N N N 30.578 -2.511 102.599 0.783 -0.746 -0.385 C24 V00 23 V00 C25 C20 C 0 1 Y N N N N N 30.872 -2.949 106.028 4.633 0.041 -0.647 C25 V00 24 V00 C26 C21 C 0 1 Y N N N N N 29.971 -4.050 106.095 5.233 -0.847 -1.556 C26 V00 25 V00 C27 C22 C 0 1 Y N N N N N 30.262 -5.143 106.909 6.303 -0.438 -2.291 C27 V00 26 V00 C28 C23 C 0 1 Y N N N N N 31.428 -5.182 107.670 6.815 0.851 -2.157 C28 V00 27 V00 C29 C24 C 0 1 Y N N N N N 32.311 -4.114 107.606 6.260 1.738 -1.286 C29 V00 28 V00 C30 C25 C 0 1 Y N N N N N 32.018 -2.993 106.775 5.154 1.352 -0.510 C30 V00 29 V00 C31 C26 C 0 1 Y N N N N N 32.937 -1.913 106.729 4.552 2.243 0.394 C31 V00 30 V00 F21 F1 F 0 1 N N N N N N 32.806 -11.185 97.911 -6.599 3.448 -0.016 F21 V00 31 V00 H1 H1 H 0 1 N N N N N N 35.251 1.022 106.795 3.408 4.492 1.132 H1 V00 32 V00 H2 H2 H 0 1 N N N N N N 34.096 0.168 107.873 2.913 4.586 2.839 H2 V00 33 V00 H3 H3 H 0 1 N N N N N N 35.141 -0.770 106.753 4.510 3.928 2.411 H3 V00 34 V00 H4 H4 H 0 1 N N N N N N 31.289 0.126 104.574 2.118 0.236 1.592 H4 V00 35 V00 H5 H5 H 0 1 N N N N N N 28.532 -2.270 104.936 3.042 -2.065 -1.041 H5 V00 36 V00 H6 H6 H 0 1 N N N N N N 28.762 0.147 105.278 4.788 -2.700 0.602 H6 V00 37 V00 H7 H7 H 0 1 N N N N N N 29.435 0.305 103.620 3.656 -2.366 1.934 H7 V00 38 V00 H8 H8 H 0 1 N N N N N N 27.752 -0.279 103.855 3.329 -3.700 0.802 H8 V00 39 V00 H10 H10 H 0 1 N N N N N N 27.321 -2.847 103.222 0.933 -3.365 -0.771 H10 V00 40 V00 H11 H11 H 0 1 N N N N N N 28.524 -4.030 103.837 1.562 -3.781 0.841 H11 V00 41 V00 H12 H12 H 0 1 N N N N N N 27.907 -3.313 100.934 -0.907 -4.047 0.736 H12 V00 42 V00 H13 H13 H 0 1 N N N N N N 27.681 -4.891 101.761 -0.441 -2.774 1.890 H13 V00 43 V00 H14 H14 H 0 1 N N N N N N 30.051 -5.029 102.116 -1.364 -2.343 -0.989 H14 V00 44 V00 H15 H15 H 0 1 N N N N N N 29.589 -7.099 100.939 -3.380 -0.588 -0.648 H15 V00 45 V00 H16 H16 H 0 1 N N N N N N 29.527 -6.814 97.965 -5.427 -2.071 0.613 H16 V00 46 V00 H17 H17 H 0 1 N N N N N N 29.023 -8.266 98.893 -4.902 -0.783 1.723 H17 V00 47 V00 H18 H18 H 0 1 N N N N N N 32.142 -6.179 99.208 -6.497 -1.532 -1.498 H18 V00 48 V00 H19 H19 H 0 1 N N N N N N 34.420 -7.107 99.010 -7.845 0.099 -2.757 H19 V00 49 V00 H20 H20 H 0 1 N N N N N N 34.742 -9.481 98.398 -7.892 2.459 -2.058 H20 V00 50 V00 H21 H21 H 0 1 N N N N N N 30.495 -9.989 98.186 -5.245 1.554 1.166 H21 V00 51 V00 H22 H22 H 0 1 N N N N N N 31.486 -3.501 100.911 -1.216 0.057 -0.435 H22 V00 52 V00 H23 H23 H 0 1 N N N N N N 30.044 -2.509 100.509 -0.624 -0.342 1.196 H23 V00 53 V00 H24 H24 H 0 1 N N N N N N 31.138 -3.165 103.284 1.260 0.231 -0.304 H24 V00 54 V00 H25 H25 H 0 1 N N N N N N 31.123 -1.565 102.467 0.759 -1.052 -1.431 H25 V00 55 V00 H26 H26 H 0 1 N N N N N N 29.061 -4.038 105.514 4.847 -1.849 -1.670 H26 V00 56 V00 H27 H27 H 0 1 N N N N N N 29.572 -5.973 106.950 6.762 -1.123 -2.988 H27 V00 57 V00 H28 H28 H 0 1 N N N N N N 31.642 -6.032 108.301 7.666 1.150 -2.751 H28 V00 58 V00 H29 H29 H 0 1 N N N N N N 33.222 -4.132 108.186 6.668 2.734 -1.192 H29 V00 59 V00 H30 H30 H 0 1 N N N N N N 33.842 -1.947 107.318 4.937 3.246 0.505 H30 V00 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V00 F21 C20 SING N N 1 V00 C20 C22 DOUB Y N 2 V00 C20 C19 SING Y N 3 V00 C22 C16 SING Y N 4 V00 C19 C18 DOUB Y N 5 V00 C16 C15 SING N N 6 V00 C16 C17 DOUB Y N 7 V00 C18 C17 SING Y N 8 V00 C15 N14 SING N N 9 V00 O13 C12 DOUB N N 10 V00 C12 N14 SING N N 11 V00 C12 C11 SING N N 12 V00 C23 C11 SING N N 13 V00 C23 C24 SING N N 14 V00 C11 C10 SING N N 15 V00 C10 C09 SING N N 16 V00 C24 N08 SING N N 17 V00 C09 N08 SING N N 18 V00 N08 C06 SING N N 19 V00 C07 C06 SING N N 20 V00 C06 C05 SING N N 21 V00 C04 C05 DOUB Y N 22 V00 C04 C03 SING Y N 23 V00 C05 C25 SING Y N 24 V00 O02 C03 SING N N 25 V00 O02 C01 SING N N 26 V00 C03 C31 DOUB Y N 27 V00 C25 C26 DOUB Y N 28 V00 C25 C30 SING Y N 29 V00 C26 C27 SING Y N 30 V00 C31 C30 SING Y N 31 V00 C30 C29 DOUB Y N 32 V00 C27 C28 DOUB Y N 33 V00 C29 C28 SING Y N 34 V00 C01 H1 SING N N 35 V00 C01 H2 SING N N 36 V00 C01 H3 SING N N 37 V00 C04 H4 SING N N 38 V00 C06 H5 SING N N 39 V00 C07 H6 SING N N 40 V00 C07 H7 SING N N 41 V00 C07 H8 SING N N 42 V00 C09 H10 SING N N 43 V00 C09 H11 SING N N 44 V00 C10 H12 SING N N 45 V00 C10 H13 SING N N 46 V00 C11 H14 SING N N 47 V00 N14 H15 SING N N 48 V00 C15 H16 SING N N 49 V00 C15 H17 SING N N 50 V00 C17 H18 SING N N 51 V00 C18 H19 SING N N 52 V00 C19 H20 SING N N 53 V00 C22 H21 SING N N 54 V00 C23 H22 SING N N 55 V00 C23 H23 SING N N 56 V00 C24 H24 SING N N 57 V00 C24 H25 SING N N 58 V00 C26 H26 SING N N 59 V00 C27 H27 SING N N 60 V00 C28 H28 SING N N 61 V00 C29 H29 SING N N 62 V00 C31 H30 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V00 InChI InChI 1.06 "InChI=1S/C26H29FN2O2/c1-18(25-16-23(31-2)15-21-7-3-4-9-24(21)25)29-12-10-20(11-13-29)26(30)28-17-19-6-5-8-22(27)14-19/h3-9,14-16,18,20H,10-13,17H2,1-2H3,(H,28,30)/t18-/m1/s1" V00 InChIKey InChI 1.06 VMBLTEVHYLOHOW-GOSISDBHSA-N V00 SMILES_CANONICAL CACTVS 3.385 "COc1cc2ccccc2c(c1)[C@@H](C)N3CCC(CC3)C(=O)NCc4cccc(F)c4" V00 SMILES CACTVS 3.385 "COc1cc2ccccc2c(c1)[CH](C)N3CCC(CC3)C(=O)NCc4cccc(F)c4" V00 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1cc(cc2c1cccc2)OC)N3CCC(CC3)C(=O)NCc4cccc(c4)F" V00 SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cc(cc2c1cccc2)OC)N3CCC(CC3)C(=O)NCc4cccc(c4)F" # _pdbx_chem_comp_identifier.comp_id V00 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(3-fluorophenyl)methyl]-1-[(1~{R})-1-(3-methoxynaphthalen-1-yl)ethyl]piperidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V00 "Create component" 2023-06-30 PDBJ V00 "Initial release" 2024-07-03 RCSB #