data_V0K # _chem_comp.id V0K _chem_comp.name "1-[[3,4-bis(fluoranyl)phenyl]methyl]-~{N}-[(1~{R})-2-[[(3~{E})-3-(1~{H}-imidazol-5-ylmethylidene)-2-oxidanylidene-1~{H}-indol-5-yl]amino]-2-oxidanylidene-1-phenyl-ethyl]-6-methyl-2-oxidanylidene-pyridine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H26 F2 N6 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-01 _chem_comp.pdbx_modified_date 2021-10-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 620.605 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V0K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7O2V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V0K C01 C1 C 0 1 N N N -15.509 -26.151 2.686 7.651 -0.913 -0.023 C01 V0K 1 V0K C02 C2 C 0 1 N N N -14.134 -26.215 3.382 6.212 -1.306 0.197 C02 V0K 2 V0K C03 C3 C 0 1 N N N -13.159 -27.190 3.108 5.921 -2.310 1.062 C03 V0K 3 V0K C04 C4 C 0 1 N N N -11.872 -27.215 3.790 4.595 -2.686 1.278 C04 V0K 4 V0K C05 C5 C 0 1 N N N -11.545 -26.297 4.762 3.584 -2.016 0.593 C05 V0K 5 V0K C06 C6 C 0 1 N N N -10.159 -26.257 5.482 2.174 -2.383 0.793 C06 V0K 6 V0K C09 C7 C 0 1 N N R -7.955 -27.285 6.600 -0.187 -2.155 0.234 C09 V0K 7 V0K C10 C8 C 0 1 N N N -6.854 -28.503 6.319 -1.018 -1.091 -0.436 C10 V0K 8 V0K C13 C9 C 0 1 Y N N -4.959 -30.145 7.254 -3.122 -0.048 -0.822 C13 V0K 9 V0K C14 C10 C 0 1 Y N N -4.211 -30.638 8.360 -2.660 0.680 -1.913 C14 V0K 10 V0K C15 C11 C 0 1 Y N N -3.251 -31.681 8.214 -3.402 1.724 -2.426 C15 V0K 11 V0K C16 C12 C 0 1 Y N N -3.005 -32.281 6.946 -4.624 2.060 -1.854 C16 V0K 12 V0K C18 C13 C 0 1 N N N -2.202 -33.603 5.164 -6.608 3.010 -1.339 C18 V0K 13 V0K C20 C14 C 0 1 N N N -3.254 -32.670 4.571 -6.397 1.914 -0.384 C20 V0K 14 V0K C21 C15 C 0 1 N N N -3.480 -32.789 3.204 -7.233 1.522 0.642 C21 V0K 15 V0K C22 C16 C 0 1 Y N N -4.404 -32.141 2.221 -6.711 0.822 1.750 C22 V0K 16 V0K C23 C17 C 0 1 Y N N -4.735 -30.830 1.807 -7.426 0.118 2.704 C23 V0K 17 V0K C25 C18 C 0 1 Y N N -5.988 -32.132 0.527 -5.335 -0.049 3.223 C25 V0K 18 V0K C27 C19 C 0 1 Y N N -3.730 -31.842 5.776 -5.090 1.326 -0.755 C27 V0K 19 V0K C28 C20 C 0 1 Y N N -4.676 -30.795 5.995 -4.341 0.271 -0.244 C28 V0K 20 V0K C29 C21 C 0 1 Y N N -7.372 -25.953 6.047 -0.587 -3.510 -0.291 C29 V0K 21 V0K C30 C22 C 0 1 Y N N -7.172 -24.747 6.779 -1.437 -4.314 0.445 C30 V0K 22 V0K C31 C23 C 0 1 Y N N -6.673 -23.578 6.145 -1.803 -5.557 -0.036 C31 V0K 23 V0K C32 C24 C 0 1 Y N N -6.388 -23.579 4.764 -1.320 -5.996 -1.255 C32 V0K 24 V0K C33 C25 C 0 1 Y N N -6.604 -24.751 4.021 -0.470 -5.192 -1.991 C33 V0K 25 V0K C34 C26 C 0 1 Y N N -7.097 -25.909 4.657 -0.108 -3.947 -1.512 C34 V0K 26 V0K C35 C27 C 0 1 N N N -12.558 -25.210 5.065 3.939 -0.972 -0.301 C35 V0K 27 V0K C38 C28 C 0 1 N N N -14.923 -24.130 4.643 5.592 0.436 -1.389 C38 V0K 28 V0K C39 C29 C 0 1 Y N N -14.886 -23.008 3.545 5.635 1.741 -0.637 C39 V0K 29 V0K C40 C30 C 0 1 Y N N -13.788 -22.112 3.411 6.848 2.257 -0.219 C40 V0K 30 V0K C41 C31 C 0 1 Y N N -13.754 -21.113 2.416 6.891 3.454 0.471 C41 V0K 31 V0K C42 C32 C 0 1 Y N N -14.837 -20.994 1.524 5.718 4.138 0.744 C42 V0K 32 V0K C44 C33 C 0 1 Y N N -15.939 -21.880 1.637 4.502 3.620 0.325 C44 V0K 33 V0K C46 C34 C 0 1 Y N N -15.957 -22.871 2.639 4.464 2.424 -0.370 C46 V0K 34 V0K F43 F1 F 0 1 N N N -14.832 -20.054 0.573 5.758 5.305 1.424 F43 V0K 35 V0K F45 F2 F 0 1 N N N -16.966 -21.768 0.790 3.357 4.285 0.591 F45 V0K 36 V0K N08 N1 N 0 1 N N N -9.361 -27.402 5.953 1.231 -1.920 -0.051 N08 V0K 37 V0K N12 N2 N 0 1 N N N -5.994 -29.045 7.360 -2.359 -1.106 -0.311 N12 V0K 38 V0K N17 N3 N 0 1 N N N -2.099 -33.332 6.564 -5.552 3.048 -2.169 N17 V0K 39 V0K N24 N4 N 0 1 Y N N -5.698 -30.830 0.783 -6.550 -0.389 3.570 N24 V0K 40 V0K N26 N5 N 0 1 Y N N -5.226 -32.941 1.368 -5.379 0.694 2.102 N26 V0K 41 V0K N37 N6 N 0 1 N N N -13.868 -25.217 4.359 5.234 -0.646 -0.468 N37 V0K 42 V0K O07 O1 O 0 1 N N N -9.713 -25.121 5.592 1.859 -3.104 1.721 O07 V0K 43 V0K O11 O2 O 0 1 N N N -6.787 -28.934 5.179 -0.479 -0.222 -1.087 O11 V0K 44 V0K O19 O3 O 0 1 N N N -1.532 -34.458 4.589 -7.574 3.752 -1.375 O19 V0K 45 V0K O36 O4 O 0 1 N N N -12.410 -24.303 5.891 3.073 -0.370 -0.912 O36 V0K 46 V0K H012 H1 H 0 0 N N N -16.080 -25.297 3.080 7.903 -0.079 0.632 H012 V0K 47 V0K H013 H2 H 0 0 N N N -15.366 -26.028 1.602 8.297 -1.761 0.203 H013 V0K 48 V0K H011 H3 H 0 0 N N N -16.061 -27.082 2.879 7.791 -0.615 -1.062 H011 V0K 49 V0K H031 H4 H 0 0 N N N -13.371 -27.946 2.367 6.717 -2.820 1.584 H031 V0K 50 V0K H041 H5 H 0 0 N N N -11.153 -27.976 3.525 4.356 -3.485 1.964 H041 V0K 51 V0K H091 H6 H 0 0 N N N -8.074 -27.193 7.690 -0.352 -2.120 1.311 H091 V0K 52 V0K H141 H7 H 0 0 N N N -4.376 -30.209 9.338 -1.712 0.425 -2.363 H141 V0K 53 V0K H151 H8 H 0 0 N N N -2.701 -32.022 9.079 -3.032 2.282 -3.273 H151 V0K 54 V0K H211 H9 H 0 0 N N N -2.836 -33.523 2.742 -8.288 1.750 0.595 H211 V0K 55 V0K H231 H10 H 0 0 N N N -4.300 -29.935 2.227 -8.499 0.001 2.739 H231 V0K 56 V0K H251 H11 H 0 0 N N N -6.695 -32.484 -0.210 -4.435 -0.327 3.752 H251 V0K 57 V0K H281 H12 H 0 0 N N N -5.235 -30.456 5.135 -4.708 -0.297 0.598 H281 V0K 58 V0K H301 H13 H 0 0 N N N -7.404 -24.721 7.834 -1.814 -3.971 1.397 H301 V0K 59 V0K H311 H14 H 0 0 N N N -6.511 -22.682 6.725 -2.467 -6.185 0.539 H311 V0K 60 V0K H321 H15 H 0 0 N N N -6.008 -22.689 4.284 -1.605 -6.967 -1.631 H321 V0K 61 V0K H331 H16 H 0 0 N N N -6.392 -24.765 2.962 -0.096 -5.533 -2.945 H331 V0K 62 V0K H341 H17 H 0 0 N N N -7.271 -26.794 4.064 0.556 -3.319 -2.088 H341 V0K 63 V0K H381 H18 H 0 0 N N N -14.719 -23.679 5.625 4.848 0.499 -2.182 H381 V0K 64 V0K H382 H19 H 0 0 N N N -15.921 -24.592 4.652 6.571 0.235 -1.823 H382 V0K 65 V0K H401 H20 H 0 0 N N N -12.955 -22.200 4.093 7.763 1.725 -0.431 H401 V0K 66 V0K H411 H21 H 0 0 N N N -12.907 -20.447 2.339 7.838 3.856 0.798 H411 V0K 67 V0K H461 H22 H 0 0 N N N -16.805 -23.536 2.714 3.517 2.020 -0.698 H461 V0K 68 V0K H081 H23 H 0 0 N N N -9.752 -28.317 5.849 1.490 -1.431 -0.848 H081 V0K 69 V0K H121 H24 H 0 0 N N N -6.101 -28.636 8.266 -2.797 -1.849 0.133 H121 V0K 70 V0K H171 H25 H 0 0 N N N -1.482 -33.807 7.191 -5.448 3.684 -2.894 H171 V0K 71 V0K H261 H27 H 0 0 N N N -5.251 -33.941 1.374 -4.620 1.075 1.632 H261 V0K 72 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V0K C25 N24 DOUB Y N 1 V0K C25 N26 SING Y N 2 V0K F43 C42 SING N N 3 V0K N24 C23 SING Y N 4 V0K F45 C44 SING N N 5 V0K N26 C22 SING Y N 6 V0K C42 C44 DOUB Y N 7 V0K C42 C41 SING Y N 8 V0K C44 C46 SING Y N 9 V0K C23 C22 DOUB Y N 10 V0K C22 C21 SING N N 11 V0K C41 C40 DOUB Y N 12 V0K C46 C39 DOUB Y N 13 V0K C01 C02 SING N N 14 V0K C03 C02 DOUB N N 15 V0K C03 C04 SING N N 16 V0K C21 C20 DOUB N E 17 V0K C02 N37 SING N N 18 V0K C40 C39 SING Y N 19 V0K C39 C38 SING N N 20 V0K C04 C05 DOUB N N 21 V0K C33 C34 DOUB Y N 22 V0K C33 C32 SING Y N 23 V0K N37 C38 SING N N 24 V0K N37 C35 SING N N 25 V0K C20 C18 SING N N 26 V0K C20 C27 SING N N 27 V0K O19 C18 DOUB N N 28 V0K C34 C29 SING Y N 29 V0K C05 C35 SING N N 30 V0K C05 C06 SING N N 31 V0K C32 C31 DOUB Y N 32 V0K C35 O36 DOUB N N 33 V0K C18 N17 SING N N 34 V0K O11 C10 DOUB N N 35 V0K C06 O07 DOUB N N 36 V0K C06 N08 SING N N 37 V0K C27 C28 DOUB Y N 38 V0K C27 C16 SING Y N 39 V0K N08 C09 SING N N 40 V0K C28 C13 SING Y N 41 V0K C29 C09 SING N N 42 V0K C29 C30 DOUB Y N 43 V0K C31 C30 SING Y N 44 V0K C10 C09 SING N N 45 V0K C10 N12 SING N N 46 V0K N17 C16 SING N N 47 V0K C16 C15 DOUB Y N 48 V0K C13 N12 SING N N 49 V0K C13 C14 DOUB Y N 50 V0K C15 C14 SING Y N 51 V0K C01 H012 SING N N 52 V0K C01 H013 SING N N 53 V0K C01 H011 SING N N 54 V0K C03 H031 SING N N 55 V0K C04 H041 SING N N 56 V0K C09 H091 SING N N 57 V0K C14 H141 SING N N 58 V0K C15 H151 SING N N 59 V0K C21 H211 SING N N 60 V0K C23 H231 SING N N 61 V0K C25 H251 SING N N 62 V0K C28 H281 SING N N 63 V0K C30 H301 SING N N 64 V0K C31 H311 SING N N 65 V0K C32 H321 SING N N 66 V0K C33 H331 SING N N 67 V0K C34 H341 SING N N 68 V0K C38 H381 SING N N 69 V0K C38 H382 SING N N 70 V0K C40 H401 SING N N 71 V0K C41 H411 SING N N 72 V0K C46 H461 SING N N 73 V0K N08 H081 SING N N 74 V0K N12 H121 SING N N 75 V0K N17 H171 SING N N 76 V0K N26 H261 SING N N 77 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V0K InChI InChI 1.03 "InChI=1S/C34H26F2N6O4/c1-19-7-10-24(34(46)42(19)17-20-8-11-27(35)28(36)13-20)31(43)41-30(21-5-3-2-4-6-21)33(45)39-22-9-12-29-25(14-22)26(32(44)40-29)15-23-16-37-18-38-23/h2-16,18,30H,17H2,1H3,(H,37,38)(H,39,45)(H,40,44)(H,41,43)/b26-15+/t30-/m1/s1" V0K InChIKey InChI 1.03 KHPDVVDNRUBARQ-WOZRVJTFSA-N V0K SMILES_CANONICAL CACTVS 3.385 "CC1=CC=C(C(=O)N[C@@H](C(=O)Nc2ccc3NC(=O)/C(=C/c4[nH]cnc4)c3c2)c5ccccc5)C(=O)N1Cc6ccc(F)c(F)c6" V0K SMILES CACTVS 3.385 "CC1=CC=C(C(=O)N[CH](C(=O)Nc2ccc3NC(=O)C(=Cc4[nH]cnc4)c3c2)c5ccccc5)C(=O)N1Cc6ccc(F)c(F)c6" V0K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=CC=C(C(=O)N1Cc2ccc(c(c2)F)F)C(=O)N[C@H](c3ccccc3)C(=O)Nc4ccc5c(c4)/C(=C\c6cnc[nH]6)/C(=O)N5" V0K SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CC=C(C(=O)N1Cc2ccc(c(c2)F)F)C(=O)NC(c3ccccc3)C(=O)Nc4ccc5c(c4)C(=Cc6cnc[nH]6)C(=O)N5" # _pdbx_chem_comp_identifier.comp_id V0K _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[[3,4-bis(fluoranyl)phenyl]methyl]-~{N}-[(1~{R})-2-[[(3~{E})-3-(1~{H}-imidazol-5-ylmethylidene)-2-oxidanylidene-1~{H}-indol-5-yl]amino]-2-oxidanylidene-1-phenyl-ethyl]-6-methyl-2-oxidanylidene-pyridine-3-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V0K "Create component" 2021-04-01 PDBE V0K "Initial release" 2021-10-20 RCSB ##