data_V1Y # _chem_comp.id V1Y _chem_comp.name "4-amino-N-{1-[(3-chloro-2-fluorophenyl)amino]-6-methylisoquinolin-5-yl}thieno[3,2-d]pyrimidine-7-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H16 Cl F N6 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Belvarafenib _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-06-16 _chem_comp.pdbx_modified_date 2021-03-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 478.929 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V1Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6XFP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V1Y C4 C1 C 0 1 Y N N -5.374 12.356 13.858 1.697 2.005 -0.952 C4 V1Y 1 V1Y C14 C2 C 0 1 Y N N -7.692 20.468 14.448 -6.516 -0.698 0.363 C14 V1Y 2 V1Y C5 C3 C 0 1 Y N N -4.583 13.458 13.472 1.631 0.631 -0.683 C5 V1Y 3 V1Y C6 C4 C 0 1 Y N N -5.139 14.761 13.562 0.379 -0.030 -0.731 C6 V1Y 4 V1Y C11 C5 C 0 1 Y N N -7.566 18.455 13.225 -4.306 -0.233 -0.294 C11 V1Y 5 V1Y C7 C6 C 0 1 Y N N -6.471 14.952 14.021 -0.780 0.702 -1.049 C7 V1Y 6 V1Y C9 C7 C 0 1 N N N -7.256 17.026 13.030 -3.037 0.506 -0.331 C9 V1Y 7 V1Y C12 C8 C 0 1 Y N N -7.968 19.309 12.247 -4.522 -1.366 -1.002 C12 V1Y 8 V1Y C3 C9 C 0 1 Y N N -6.655 12.574 14.315 0.560 2.692 -1.258 C3 V1Y 9 V1Y C1 C10 C 0 1 N N N -8.635 14.028 14.922 -1.910 2.845 -1.651 C1 V1Y 10 V1Y C15 C11 C 0 1 Y N N -7.382 19.112 14.517 -5.446 0.180 0.515 C15 V1Y 11 V1Y C17 C12 C 0 1 Y N N -6.870 19.388 16.761 -6.719 1.430 1.990 C17 V1Y 12 V1Y C19 C13 C 0 1 Y N N -7.578 21.251 15.603 -7.700 -0.444 1.078 C19 V1Y 13 V1Y C2 C14 C 0 1 Y N N -7.218 13.852 14.404 -0.674 2.053 -1.309 C2 V1Y 14 V1Y C21 C15 C 0 1 Y N N -4.332 15.854 13.170 0.342 -1.410 -0.456 C21 V1Y 15 V1Y C22 C16 C 0 1 Y N N -3.066 15.626 12.737 1.505 -2.052 -0.156 C22 V1Y 16 V1Y C24 C17 C 0 1 Y N N -3.248 13.330 12.997 2.781 -0.124 -0.361 C24 V1Y 17 V1Y C26 C18 C 0 1 Y N N -1.271 11.936 12.617 5.175 -0.283 -0.124 C26 V1Y 18 V1Y C27 C19 C 0 1 Y N N -0.892 11.127 11.551 5.185 -1.619 -0.502 C27 V1Y 19 V1Y C28 C20 C 0 1 Y N N 0.443 10.942 11.242 6.325 -2.379 -0.321 C28 V1Y 20 V1Y C29 C21 C 0 1 Y N N 1.421 11.560 12.004 7.456 -1.811 0.235 C29 V1Y 21 V1Y C30 C22 C 0 1 Y N N 1.049 12.363 13.066 7.452 -0.480 0.614 C30 V1Y 22 V1Y C31 C23 C 0 1 Y N N -0.288 12.556 13.391 6.316 0.288 0.430 C31 V1Y 23 V1Y F32 F1 F 0 1 N N N -0.619 13.352 14.449 6.313 1.589 0.794 F32 V1Y 24 V1Y N16 N1 N 0 1 Y N N -6.988 18.612 15.705 -5.596 1.233 1.343 N16 V1Y 25 V1Y N18 N2 N 0 1 Y N N -7.155 20.685 16.731 -7.755 0.620 1.870 N18 V1Y 26 V1Y N20 N3 N 0 1 N N N -7.882 22.598 15.546 -8.791 -1.289 0.958 N20 V1Y 27 V1Y N23 N4 N 0 1 Y N N -2.575 14.399 12.659 2.668 -1.416 -0.115 N23 V1Y 28 V1Y N25 N5 N 0 1 N N N -2.641 12.091 12.904 4.022 0.488 -0.305 N25 V1Y 29 V1Y N8 N6 N 0 1 N N N -6.891 16.286 14.107 -2.023 0.068 -1.102 N8 V1Y 30 V1Y O10 O1 O 0 1 N N N -7.245 16.515 11.926 -2.902 1.515 0.336 O10 V1Y 31 V1Y S13 S1 S 0 1 Y N N -8.179 20.908 12.822 -6.086 -1.985 -0.750 S13 V1Y 32 V1Y CL33 CL1 CL 0 0 N N N 2.260 13.153 14.025 8.875 0.228 1.312 CL33 V1Y 33 V1Y H1 H1 H 0 1 N N N -4.980 11.352 13.796 2.647 2.519 -0.913 H1 V1Y 34 V1Y H2 H2 H 0 1 N N N -8.136 19.012 11.222 -3.790 -1.821 -1.653 H2 V1Y 35 V1Y H3 H3 H 0 1 N N N -7.249 11.724 14.617 0.618 3.751 -1.460 H3 V1Y 36 V1Y H4 H4 H 0 1 N N N -9.342 13.979 14.081 -2.279 3.347 -0.756 H4 V1Y 37 V1Y H5 H5 H 0 1 N N N -8.865 13.228 15.641 -1.667 3.587 -2.410 H5 V1Y 38 V1Y H6 H6 H 0 1 N N N -8.725 15.005 15.420 -2.678 2.172 -2.033 H6 V1Y 39 V1Y H7 H7 H 0 1 N N N -6.528 18.953 17.689 -6.799 2.285 2.644 H7 V1Y 40 V1Y H8 H8 H 0 1 N N N -4.720 16.861 13.215 -0.593 -1.950 -0.483 H8 V1Y 41 V1Y H9 H9 H 0 1 N N N -2.446 16.463 12.450 1.479 -3.111 0.055 H9 V1Y 42 V1Y H10 H10 H 0 1 N N N -1.650 10.637 10.957 4.302 -2.064 -0.936 H10 V1Y 43 V1Y H11 H11 H 0 1 N N N 0.723 10.316 10.407 6.332 -3.418 -0.615 H11 V1Y 44 V1Y H12 H12 H 0 1 N N N 2.465 11.416 11.770 8.345 -2.409 0.375 H12 V1Y 45 V1Y H13 H13 H 0 1 N N N -7.731 23.013 16.443 -8.742 -2.064 0.376 H13 V1Y 46 V1Y H14 H14 H 0 1 N N N -7.295 23.044 14.870 -9.604 -1.106 1.455 H14 V1Y 47 V1Y H15 H15 H 0 1 N N N -3.197 11.272 13.046 4.092 1.452 -0.391 H15 V1Y 48 V1Y H16 H16 H 0 1 N N N -6.923 16.715 15.010 -2.157 -0.689 -1.695 H16 V1Y 49 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V1Y C28 C27 DOUB Y N 1 V1Y C28 C29 SING Y N 2 V1Y C27 C26 SING Y N 3 V1Y O10 C9 DOUB N N 4 V1Y C29 C30 DOUB Y N 5 V1Y C12 S13 SING Y N 6 V1Y C12 C11 DOUB Y N 7 V1Y C26 N25 SING N N 8 V1Y C26 C31 DOUB Y N 9 V1Y N23 C22 DOUB Y N 10 V1Y N23 C24 SING Y N 11 V1Y C22 C21 SING Y N 12 V1Y S13 C14 SING Y N 13 V1Y N25 C24 SING N N 14 V1Y C24 C5 DOUB Y N 15 V1Y C9 C11 SING N N 16 V1Y C9 N8 SING N N 17 V1Y C30 C31 SING Y N 18 V1Y C30 CL33 SING N N 19 V1Y C21 C6 DOUB Y N 20 V1Y C11 C15 SING Y N 21 V1Y C31 F32 SING N N 22 V1Y C5 C6 SING Y N 23 V1Y C5 C4 SING Y N 24 V1Y C6 C7 SING Y N 25 V1Y C4 C3 DOUB Y N 26 V1Y C7 N8 SING N N 27 V1Y C7 C2 DOUB Y N 28 V1Y C3 C2 SING Y N 29 V1Y C2 C1 SING N N 30 V1Y C14 C15 DOUB Y N 31 V1Y C14 C19 SING Y N 32 V1Y C15 N16 SING Y N 33 V1Y N20 C19 SING N N 34 V1Y C19 N18 DOUB Y N 35 V1Y N16 C17 DOUB Y N 36 V1Y N18 C17 SING Y N 37 V1Y C4 H1 SING N N 38 V1Y C12 H2 SING N N 39 V1Y C3 H3 SING N N 40 V1Y C1 H4 SING N N 41 V1Y C1 H5 SING N N 42 V1Y C1 H6 SING N N 43 V1Y C17 H7 SING N N 44 V1Y C21 H8 SING N N 45 V1Y C22 H9 SING N N 46 V1Y C27 H10 SING N N 47 V1Y C28 H11 SING N N 48 V1Y C29 H12 SING N N 49 V1Y N20 H13 SING N N 50 V1Y N20 H14 SING N N 51 V1Y N25 H15 SING N N 52 V1Y N8 H16 SING N N 53 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V1Y SMILES ACDLabs 12.01 "c1cc(c(c2c1c(ncc2)Nc3c(c(ccc3)Cl)F)NC(c5c4c(c(ncn4)N)sc5)=O)C" V1Y InChI InChI 1.03 "InChI=1S/C23H16ClFN6OS/c1-11-5-6-13-12(7-8-27-22(13)30-16-4-2-3-15(24)17(16)25)18(11)31-23(32)14-9-33-20-19(14)28-10-29-21(20)26/h2-10H,1H3,(H,27,30)(H,31,32)(H2,26,28,29)" V1Y InChIKey InChI 1.03 KVCQTKNUUQOELD-UHFFFAOYSA-N V1Y SMILES_CANONICAL CACTVS 3.385 "Cc1ccc2c(Nc3cccc(Cl)c3F)nccc2c1NC(=O)c4csc5c(N)ncnc45" V1Y SMILES CACTVS 3.385 "Cc1ccc2c(Nc3cccc(Cl)c3F)nccc2c1NC(=O)c4csc5c(N)ncnc45" V1Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1NC(=O)c3csc4c3ncnc4N)ccnc2Nc5cccc(c5F)Cl" V1Y SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1NC(=O)c3csc4c3ncnc4N)ccnc2Nc5cccc(c5F)Cl" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier V1Y "SYSTEMATIC NAME" ACDLabs 12.01 "4-amino-N-{1-[(3-chloro-2-fluorophenyl)amino]-6-methylisoquinolin-5-yl}thieno[3,2-d]pyrimidine-7-carboxamide" V1Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-azanyl-~{N}-[1-[(3-chloranyl-2-fluoranyl-phenyl)amino]-6-methyl-isoquinolin-5-yl]thieno[3,2-d]pyrimidine-7-carboxamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id V1Y _pdbx_chem_comp_synonyms.name Belvarafenib _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V1Y "Create component" 2020-06-16 RCSB V1Y "Modify synonyms" 2020-06-16 RCSB V1Y "Modify synonyms" 2021-03-01 PDBE V1Y "Initial release" 2021-03-10 RCSB ##