data_V2D # _chem_comp.id V2D _chem_comp.name "methyl 2-[(3-hydroxy-2-methylphenoxy)methyl]pyridine-3-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H15 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-06-18 _chem_comp.pdbx_modified_date 2020-11-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 273.284 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V2D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6XE7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V2D C1 C1 C 0 1 N N N 12.848 -12.668 -21.983 2.365 0.324 2.209 C1 V2D 1 V2D C2 C2 C 0 1 Y N N 12.475 -12.169 -20.599 2.759 0.234 0.757 C2 V2D 2 V2D C3 C3 C 0 1 Y N N 13.281 -11.223 -19.986 4.076 -0.023 0.410 C3 V2D 3 V2D C4 C4 C 0 1 Y N N 12.962 -10.752 -18.714 4.436 -0.105 -0.928 C4 V2D 4 V2D C5 C5 C 0 1 Y N N 11.825 -11.235 -18.062 3.484 0.070 -1.913 C5 V2D 5 V2D C6 C6 C 0 1 Y N N 11.008 -12.188 -18.672 2.170 0.327 -1.569 C6 V2D 6 V2D C7 C7 C 0 1 Y N N 11.329 -12.654 -19.933 1.804 0.404 -0.233 C7 V2D 7 V2D C10 C8 C 0 1 N N N 9.337 -14.043 -19.892 -0.419 0.816 -0.968 C10 V2D 8 V2D C11 C9 C 0 1 Y N N 8.586 -15.230 -20.424 -1.793 1.081 -0.406 C11 V2D 9 V2D C12 C10 C 0 1 Y N N 9.266 -16.338 -20.978 -2.590 0.011 0.004 C12 V2D 10 V2D C13 C11 C 0 1 Y N N 8.516 -17.419 -21.454 -3.861 0.278 0.530 C13 V2D 11 V2D C14 C12 C 0 1 Y N N 7.115 -17.371 -21.368 -4.270 1.596 0.618 C14 V2D 12 V2D O8 O1 O 0 1 N N N 14.414 -10.751 -20.655 5.013 -0.195 1.379 O8 V2D 13 V2D O9 O2 O 0 1 N N N 10.505 -13.611 -20.544 0.511 0.651 0.104 O9 V2D 14 V2D C15 C13 C 0 1 Y N N 6.514 -16.236 -20.804 -3.420 2.600 0.189 C15 V2D 15 V2D N16 N1 N 0 1 Y N N 7.242 -15.203 -20.347 -2.228 2.319 -0.302 N16 V2D 16 V2D C17 C14 C 0 1 N N N 10.786 -16.384 -21.073 -2.102 -1.378 -0.113 C17 V2D 17 V2D O18 O3 O 0 1 N N N 11.331 -15.994 -22.091 -0.960 -1.593 -0.466 O18 V2D 18 V2D O19 O4 O 0 1 N N N 11.533 -16.490 -19.915 -2.924 -2.407 0.171 O19 V2D 19 V2D C20 C15 C 0 1 N N N 12.857 -16.086 -19.941 -2.377 -3.745 0.033 C20 V2D 20 V2D H1 H1 H 0 1 N N N 13.505 -13.546 -21.892 2.465 1.354 2.550 H1 V2D 21 V2D H2 H2 H 0 1 N N N 11.936 -12.948 -22.530 1.330 0.001 2.325 H2 V2D 22 V2D H3 H3 H 0 1 N N N 13.374 -11.872 -22.530 3.014 -0.320 2.802 H3 V2D 23 V2D H4 H4 H 0 1 N N N 13.591 -10.017 -18.234 5.462 -0.306 -1.199 H4 V2D 24 V2D H5 H5 H 0 1 N N N 11.576 -10.868 -17.077 3.766 0.006 -2.954 H5 V2D 25 V2D H6 H6 H 0 1 N N N 10.131 -12.559 -18.162 1.428 0.465 -2.342 H6 V2D 26 V2D H7 H7 H 0 1 N N N 9.619 -14.282 -18.856 -0.443 -0.091 -1.572 H7 V2D 27 V2D H8 H8 H 0 1 N N N 8.637 -13.194 -19.895 -0.113 1.658 -1.589 H8 V2D 28 V2D H9 H9 H 0 1 N N N 9.008 -18.280 -21.882 -4.505 -0.525 0.857 H9 V2D 29 V2D H10 H10 H 0 1 N N N 6.513 -18.191 -21.729 -5.244 1.840 1.017 H10 V2D 30 V2D H11 H11 H 0 1 N N N 14.860 -10.113 -20.111 5.117 -1.112 1.667 H11 V2D 31 V2D H12 H12 H 0 1 N N N 5.437 -16.191 -20.735 -3.737 3.630 0.257 H12 V2D 32 V2D H13 H13 H 0 1 N N N 13.306 -16.234 -18.948 -1.524 -3.859 0.701 H13 V2D 33 V2D H14 H14 H 0 1 N N N 13.407 -16.681 -20.685 -3.141 -4.478 0.291 H14 V2D 34 V2D H15 H15 H 0 1 N N N 12.910 -15.021 -20.212 -2.056 -3.902 -0.997 H15 V2D 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V2D O18 C17 DOUB N N 1 V2D C1 C2 SING N N 2 V2D C13 C14 DOUB Y N 3 V2D C13 C12 SING Y N 4 V2D C14 C15 SING Y N 5 V2D C17 C12 SING N N 6 V2D C17 O19 SING N N 7 V2D C12 C11 DOUB Y N 8 V2D C15 N16 DOUB Y N 9 V2D O8 C3 SING N N 10 V2D C2 C3 DOUB Y N 11 V2D C2 C7 SING Y N 12 V2D O9 C7 SING N N 13 V2D O9 C10 SING N N 14 V2D C11 N16 SING Y N 15 V2D C11 C10 SING N N 16 V2D C3 C4 SING Y N 17 V2D C20 O19 SING N N 18 V2D C7 C6 DOUB Y N 19 V2D C4 C5 DOUB Y N 20 V2D C6 C5 SING Y N 21 V2D C1 H1 SING N N 22 V2D C1 H2 SING N N 23 V2D C1 H3 SING N N 24 V2D C4 H4 SING N N 25 V2D C5 H5 SING N N 26 V2D C6 H6 SING N N 27 V2D C10 H7 SING N N 28 V2D C10 H8 SING N N 29 V2D C13 H9 SING N N 30 V2D C14 H10 SING N N 31 V2D O8 H11 SING N N 32 V2D C15 H12 SING N N 33 V2D C20 H13 SING N N 34 V2D C20 H14 SING N N 35 V2D C20 H15 SING N N 36 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V2D SMILES ACDLabs 12.01 "Cc1c(cccc1OCc2ncccc2C(OC)=O)O" V2D InChI InChI 1.03 "InChI=1S/C15H15NO4/c1-10-13(17)6-3-7-14(10)20-9-12-11(15(18)19-2)5-4-8-16-12/h3-8,17H,9H2,1-2H3" V2D InChIKey InChI 1.03 KGBJIZYSRFDDKC-UHFFFAOYSA-N V2D SMILES_CANONICAL CACTVS 3.385 "COC(=O)c1cccnc1COc2cccc(O)c2C" V2D SMILES CACTVS 3.385 "COC(=O)c1cccnc1COc2cccc(O)c2C" V2D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cccc1OCc2c(cccn2)C(=O)OC)O" V2D SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(cccc1OCc2c(cccn2)C(=O)OC)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier V2D "SYSTEMATIC NAME" ACDLabs 12.01 "methyl 2-[(3-hydroxy-2-methylphenoxy)methyl]pyridine-3-carboxylate" V2D "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "methyl 2-[(2-methyl-3-oxidanyl-phenoxy)methyl]pyridine-3-carboxylate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V2D "Create component" 2020-06-18 RCSB V2D "Initial release" 2020-12-02 RCSB ##