data_V2E # _chem_comp.id V2E _chem_comp.name 3-morpholin-4-yl-4-nitro-benzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H12 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 236.224 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V2E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7O57 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V2E C03 C1 C 0 1 Y N N N N N -24.347 -21.067 -1.237 -0.718 1.407 -0.006 C03 V2E 1 V2E C04 C2 C 0 1 Y N N N N N -23.120 -20.455 -1.157 -0.263 0.093 -0.006 C04 V2E 2 V2E C06 C3 C 0 1 N N N N N N -21.579 -18.703 -0.187 1.492 -0.946 -1.202 C06 V2E 3 V2E C07 C4 C 0 1 N N N N N N -20.924 -18.201 1.078 3.007 -1.161 -1.198 C07 V2E 4 V2E C09 C5 C 0 1 N N N N N N -22.264 -19.419 2.482 3.033 -1.084 1.196 C09 V2E 5 V2E C10 C6 C 0 1 N N N N N N -22.536 -20.350 1.295 1.517 -0.868 1.217 C10 V2E 6 V2E C11 C7 C 0 1 Y N N N N N -22.206 -20.565 -2.222 -1.170 -0.955 -0.002 C11 V2E 7 V2E C12 C8 C 0 1 Y N N N N N -22.551 -21.299 -3.360 -2.541 -0.685 0.004 C12 V2E 8 V2E C13 C9 C 0 1 N N N N N N -21.511 -21.388 -4.499 -3.512 -1.791 0.010 C13 V2E 9 V2E C14 C10 C 0 1 Y N N N N N -23.798 -21.934 -3.451 -2.987 0.641 0.005 C14 V2E 10 V2E C15 C11 C 0 1 Y N N N N N -24.697 -21.824 -2.405 -2.074 1.675 0.006 C15 V2E 11 V2E N02 N1 N 1 1 N N N N N N -25.306 -20.968 -0.166 0.254 2.523 -0.011 N02 V2E 12 V2E N05 N2 N 0 1 N N N N N N -22.702 -19.658 0.025 1.109 -0.171 -0.012 N05 V2E 13 V2E O01 O1 O -1 1 N N N N N N -26.040 -22.086 0.195 -0.141 3.675 -0.011 O01 V2E 14 V2E O08 O2 O 0 1 N N N N N N -21.847 -18.149 2.116 3.389 -1.811 0.017 O08 V2E 15 V2E O16 O3 O 0 1 N N N N N N -25.484 -19.925 0.386 1.450 2.290 -0.016 O16 V2E 16 V2E H1 H1 H 0 1 N N N N N N -20.811 -19.207 -0.792 1.204 -0.400 -2.100 H1 V2E 17 V2E H2 H2 H 0 1 N N N N N N -21.969 -17.834 -0.738 0.987 -1.912 -1.185 H2 V2E 18 V2E H3 H3 H 0 1 N N N N N N -20.105 -18.880 1.356 3.289 -1.784 -2.048 H3 V2E 19 V2E H4 H4 H 0 1 N N N N N N -20.521 -17.193 0.901 3.512 -0.198 -1.270 H4 V2E 20 V2E H5 H5 H 0 1 N N N N N N -23.191 -19.324 3.067 3.538 -0.118 1.194 H5 V2E 21 V2E H6 H6 H 0 1 N N N N N N -21.481 -19.874 3.107 3.332 -1.650 2.078 H6 V2E 22 V2E H7 H7 H 0 1 N N N N N N -23.456 -20.916 1.503 1.013 -1.833 1.272 H7 V2E 23 V2E H8 H8 H 0 1 N N N N N N -21.690 -21.047 1.201 1.247 -0.266 2.084 H8 V2E 24 V2E H9 H9 H 0 1 N N N N N N -21.241 -20.084 -2.160 -0.818 -1.976 -0.003 H9 V2E 25 V2E H10 H10 H 0 1 N N N N N N -20.490 -21.065 -4.362 -4.571 -1.580 0.014 H10 V2E 26 V2E H13 H13 H 0 1 N N N N N N -24.055 -22.505 -4.331 -4.045 0.855 0.009 H13 V2E 27 V2E H14 H14 H 0 1 N N N N N N -25.661 -22.307 -2.467 -2.420 2.698 0.007 H14 V2E 28 V2E O1 O4 O 0 1 N Y N N N N -21.970 -21.920 -5.742 -3.123 -2.939 0.009 O1 V2E 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V2E C13 C12 SING N N 1 V2E C14 C12 DOUB Y N 2 V2E C14 C15 SING Y N 3 V2E C12 C11 SING Y N 4 V2E C15 C03 DOUB Y N 5 V2E C11 C04 DOUB Y N 6 V2E C03 C04 SING Y N 7 V2E C03 N02 SING N N 8 V2E C04 N05 SING N N 9 V2E C06 N05 SING N N 10 V2E C06 C07 SING N N 11 V2E N02 O01 SING N N 12 V2E N02 O16 DOUB N N 13 V2E N05 C10 SING N N 14 V2E C07 O08 SING N N 15 V2E C10 C09 SING N N 16 V2E O08 C09 SING N N 17 V2E C06 H1 SING N N 18 V2E C06 H2 SING N N 19 V2E C07 H3 SING N N 20 V2E C07 H4 SING N N 21 V2E C09 H5 SING N N 22 V2E C09 H6 SING N N 23 V2E C10 H7 SING N N 24 V2E C10 H8 SING N N 25 V2E C11 H9 SING N N 26 V2E C13 H10 SING N N 27 V2E C14 H13 SING N N 28 V2E C15 H14 SING N N 29 V2E C13 O1 DOUB N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V2E InChI InChI 1.03 "InChI=1S/C11H12N2O4/c14-8-9-1-2-10(13(15)16)11(7-9)12-3-5-17-6-4-12/h1-2,7-8H,3-6H2" V2E InChIKey InChI 1.03 FAJSCBIMFMOQMQ-UHFFFAOYSA-N V2E SMILES_CANONICAL CACTVS 3.385 "[O-][N+](=O)c1ccc(C=O)cc1N2CCOCC2" V2E SMILES CACTVS 3.385 "[O-][N+](=O)c1ccc(C=O)cc1N2CCOCC2" V2E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C=O)N2CCOCC2)[N+](=O)[O-]" V2E SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C=O)N2CCOCC2)[N+](=O)[O-]" # _pdbx_chem_comp_identifier.comp_id V2E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier 3-morpholin-4-yl-4-nitro-benzaldehyde # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V2E "Create component" 2021-04-08 PDBE V2E "Initial release" 2021-06-09 RCSB V2E "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id V2E _pdbx_chem_comp_pcm.modified_residue_id LYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C13 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NZ _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #