data_V2L # _chem_comp.id V2L _chem_comp.name "1-(1-benzyl-1H-imidazol-2-yl)methanamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H13 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-29 _chem_comp.pdbx_modified_date 2022-10-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 187.241 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V2L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FPJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V2L N1 N1 N 0 1 Y N N 30.397 16.082 42.784 -2.897 0.009 0.754 N1 V2L 1 V2L C7 C1 C 0 1 Y N N 29.139 17.548 41.803 -1.825 -1.762 0.089 C7 V2L 2 V2L C8 C2 C 0 1 Y N N 30.280 17.346 42.456 -2.837 -1.326 0.863 C8 V2L 3 V2L N2 N2 N 0 1 N N N 27.593 13.917 42.760 -0.737 2.441 0.501 N2 V2L 4 V2L C9 C3 C 0 1 Y N N 29.323 15.506 42.351 -1.960 0.417 -0.058 C9 V2L 5 V2L C1 C4 C 0 1 Y N N 28.883 15.586 37.891 2.749 1.148 0.235 C1 V2L 6 V2L C5 C5 C 0 1 Y N N 26.685 15.246 37.549 3.031 -1.208 0.558 C5 V2L 7 V2L C6 C6 C 0 1 N N N 27.304 16.231 41.059 -0.134 -0.641 -1.421 C6 V2L 8 V2L C4 C7 C 0 1 Y N N 26.436 15.678 38.843 1.865 -1.444 -0.146 C4 V2L 9 V2L C3 C8 C 0 1 Y N N 27.466 16.020 39.593 1.138 -0.384 -0.654 C3 V2L 10 V2L C2 C9 C 0 1 Y N N 28.643 16.003 39.126 1.583 0.911 -0.469 C2 V2L 11 V2L C10 C10 C 0 1 N N N 29.098 14.115 42.617 -1.694 1.850 -0.443 C10 V2L 12 V2L N N3 N 0 1 Y N N 28.533 16.403 41.723 -1.268 -0.657 -0.495 N V2L 13 V2L C C11 C 0 1 Y N N 27.909 15.193 37.103 3.473 0.088 0.749 C V2L 14 V2L H1 H1 H 0 1 N N N 28.783 18.490 41.412 -1.512 -2.787 -0.045 H1 V2L 15 V2L H2 H2 H 0 1 N N N 31.006 18.113 42.683 -3.487 -1.944 1.466 H2 V2L 16 V2L H3 H3 H 0 1 N N N 27.399 12.954 42.947 0.113 1.899 0.541 H3 V2L 17 V2L H4 H4 H 0 1 N N N 27.253 14.478 43.515 -0.542 3.402 0.264 H4 V2L 18 V2L H6 H6 H 0 1 N N N 29.899 15.569 37.526 3.097 2.160 0.380 H6 V2L 19 V2L H7 H7 H 0 1 N N N 25.865 14.953 36.910 3.599 -2.036 0.955 H7 V2L 20 V2L H8 H8 H 0 1 N N N 26.689 17.129 41.219 -0.278 0.147 -2.160 H8 V2L 21 V2L H9 H9 H 0 1 N N N 26.793 15.355 41.486 -0.064 -1.604 -1.927 H9 V2L 22 V2L H10 H10 H 0 1 N N N 25.428 15.733 39.226 1.522 -2.457 -0.299 H10 V2L 23 V2L H11 H11 H 0 1 N N N 29.465 16.334 39.744 1.020 1.739 -0.874 H11 V2L 24 V2L H12 H12 H 0 1 N N N 29.480 13.506 41.784 -2.628 2.413 -0.414 H12 V2L 25 V2L H13 H13 H 0 1 N N N 29.606 13.823 43.548 -1.280 1.884 -1.450 H13 V2L 26 V2L H14 H14 H 0 1 N N N 28.117 14.833 36.106 4.384 0.272 1.298 H14 V2L 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V2L C C5 DOUB Y N 1 V2L C C1 SING Y N 2 V2L C5 C4 SING Y N 3 V2L C1 C2 DOUB Y N 4 V2L C4 C3 DOUB Y N 5 V2L C2 C3 SING Y N 6 V2L C3 C6 SING N N 7 V2L C6 N SING N N 8 V2L N C7 SING Y N 9 V2L N C9 SING Y N 10 V2L C7 C8 DOUB Y N 11 V2L C9 C10 SING N N 12 V2L C9 N1 DOUB Y N 13 V2L C8 N1 SING Y N 14 V2L C10 N2 SING N N 15 V2L C7 H1 SING N N 16 V2L C8 H2 SING N N 17 V2L N2 H3 SING N N 18 V2L N2 H4 SING N N 19 V2L C1 H6 SING N N 20 V2L C5 H7 SING N N 21 V2L C6 H8 SING N N 22 V2L C6 H9 SING N N 23 V2L C4 H10 SING N N 24 V2L C2 H11 SING N N 25 V2L C10 H12 SING N N 26 V2L C10 H13 SING N N 27 V2L C H14 SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V2L SMILES ACDLabs 12.01 NCc1nccn1Cc1ccccc1 V2L InChI InChI 1.06 "InChI=1S/C11H13N3/c12-8-11-13-6-7-14(11)9-10-4-2-1-3-5-10/h1-7H,8-9,12H2" V2L InChIKey InChI 1.06 WAKASDKZDPCQPA-UHFFFAOYSA-N V2L SMILES_CANONICAL CACTVS 3.385 NCc1nccn1Cc2ccccc2 V2L SMILES CACTVS 3.385 NCc1nccn1Cc2ccccc2 V2L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)Cn2ccnc2CN" V2L SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)Cn2ccnc2CN" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier V2L "SYSTEMATIC NAME" ACDLabs 12.01 "1-(1-benzyl-1H-imidazol-2-yl)methanamine" V2L "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[1-(phenylmethyl)imidazol-2-yl]methanamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V2L "Create component" 2022-08-29 RCSB V2L "Initial release" 2022-11-02 RCSB #