data_V2T # _chem_comp.id V2T _chem_comp.name "4-methanoyl-~{N}-(1-methylpyrazol-3-yl)benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H11 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 229.235 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V2T _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7O5C _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V2T C01 C1 C 0 1 N N N N N N -26.341 -24.717 4.803 6.043 0.953 0.004 C01 V2T 1 V2T C03 C2 C 0 1 Y N N N N N -27.421 -22.920 3.504 4.421 -0.959 -0.001 C03 V2T 2 V2T C04 C3 C 0 1 Y N N N N N -27.171 -22.244 2.337 3.075 -1.095 -0.001 C04 V2T 3 V2T C05 C4 C 0 1 Y N N N N N -25.992 -22.754 1.826 2.512 0.191 -0.002 C05 V2T 4 V2T C07 C5 C 0 1 N N N N N N -25.446 -21.180 -0.171 0.236 -0.505 -0.000 C07 V2T 5 V2T C08 C6 C 0 1 Y N N N N N -24.498 -21.126 -1.361 -1.210 -0.188 -0.000 C08 V2T 6 V2T C09 C7 C 0 1 Y N N N N N -24.575 -22.128 -2.314 -2.149 -1.220 0.001 C09 V2T 7 V2T C10 C8 C 0 1 Y N N N N N -23.707 -22.122 -3.390 -3.496 -0.927 0.001 C10 V2T 8 V2T C11 C9 C 0 1 Y N N N N N -22.748 -21.124 -3.492 -3.920 0.405 -0.000 C11 V2T 9 V2T C12 C10 C 0 1 Y N N N N N -22.656 -20.136 -2.523 -2.978 1.438 -0.001 C12 V2T 10 V2T C13 C11 C 0 1 Y N N N N N -23.530 -20.137 -1.448 -1.632 1.142 0.005 C13 V2T 11 V2T C14 C12 C 0 1 N N N N N N -21.787 -21.114 -4.677 -5.360 0.720 -0.001 C14 V2T 12 V2T N02 N1 N 0 1 Y N N N N N -26.456 -23.795 3.688 4.704 0.360 -0.002 N02 V2T 13 V2T N06 N2 N 0 1 N N N N N N -25.283 -22.383 0.620 1.144 0.491 -0.002 N06 V2T 14 V2T N16 N3 N 0 1 Y N N N N N -25.558 -23.704 2.658 3.493 1.064 -0.002 N16 V2T 15 V2T O15 O1 O 0 1 N N N N N N -26.230 -20.323 0.076 0.605 -1.663 0.001 O15 V2T 16 V2T H1 H1 H 0 1 N N N N N N -25.429 -25.321 4.687 6.381 1.098 -1.023 H1 V2T 17 V2T H2 H2 H 0 1 N N N N N N -26.288 -24.150 5.744 6.013 1.915 0.516 H2 V2T 18 V2T H3 H3 H 0 1 N N N N N N -27.219 -25.379 4.823 6.734 0.287 0.522 H3 V2T 19 V2T H4 H4 H 0 1 N N N N N N -28.265 -22.761 4.159 5.141 -1.764 0.004 H4 V2T 20 V2T H5 H5 H 0 1 N N N N N N -27.778 -21.464 1.901 2.530 -2.027 -0.000 H5 V2T 21 V2T H6 H6 H 0 1 N N N N N N -25.311 -22.912 -2.217 -1.821 -2.249 0.002 H6 V2T 22 V2T H7 H7 H 0 1 N N N N N N -23.775 -22.889 -4.147 -4.222 -1.726 0.001 H7 V2T 23 V2T H8 H8 H 0 1 N N N N N N -21.903 -19.366 -2.606 -3.305 2.467 -0.002 H8 V2T 24 V2T H9 H9 H 0 1 N N N N N N -23.458 -19.375 -0.686 -0.904 1.940 0.004 H9 V2T 25 V2T H10 H10 H 0 1 N N N N N N -20.861 -20.569 -4.568 -5.687 1.749 -0.002 H10 V2T 26 V2T H13 H13 H 0 1 N N N N N N -24.599 -23.035 0.294 0.850 1.415 -0.002 H13 V2T 27 V2T O1 O2 O 0 1 N Y N N N N -22.025 -21.775 -5.921 -6.176 -0.176 -0.001 O1 V2T 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V2T C14 C11 SING N N 1 V2T C11 C10 DOUB Y N 2 V2T C11 C12 SING Y N 3 V2T C10 C09 SING Y N 4 V2T C12 C13 DOUB Y N 5 V2T C09 C08 DOUB Y N 6 V2T C13 C08 SING Y N 7 V2T C08 C07 SING N N 8 V2T C07 O15 DOUB N N 9 V2T C07 N06 SING N N 10 V2T N06 C05 SING N N 11 V2T C05 C04 SING Y N 12 V2T C05 N16 DOUB Y N 13 V2T C04 C03 DOUB Y N 14 V2T N16 N02 SING Y N 15 V2T C03 N02 SING Y N 16 V2T N02 C01 SING N N 17 V2T C01 H1 SING N N 18 V2T C01 H2 SING N N 19 V2T C01 H3 SING N N 20 V2T C03 H4 SING N N 21 V2T C04 H5 SING N N 22 V2T C09 H6 SING N N 23 V2T C10 H7 SING N N 24 V2T C12 H8 SING N N 25 V2T C13 H9 SING N N 26 V2T C14 H10 SING N N 27 V2T N06 H13 SING N N 28 V2T O1 C14 DOUB N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V2T InChI InChI 1.03 "InChI=1S/C12H11N3O2/c1-15-7-6-11(14-15)13-12(17)10-4-2-9(8-16)3-5-10/h2-8H,1H3,(H,13,14,17)" V2T InChIKey InChI 1.03 UNHIRXLYGSCEKF-UHFFFAOYSA-N V2T SMILES_CANONICAL CACTVS 3.385 "Cn1ccc(NC(=O)c2ccc(C=O)cc2)n1" V2T SMILES CACTVS 3.385 "Cn1ccc(NC(=O)c2ccc(C=O)cc2)n1" V2T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1ccc(n1)NC(=O)c2ccc(cc2)C=O" V2T SMILES "OpenEye OEToolkits" 2.0.7 "Cn1ccc(n1)NC(=O)c2ccc(cc2)C=O" # _pdbx_chem_comp_identifier.comp_id V2T _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-methanoyl-~{N}-(1-methylpyrazol-3-yl)benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V2T "Create component" 2021-04-08 PDBE V2T "Modify formula" 2021-04-08 EBI V2T "Initial release" 2021-06-09 RCSB V2T "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id V2T _pdbx_chem_comp_pcm.modified_residue_id LYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C14 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NZ _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #