data_V3T # _chem_comp.id V3T _chem_comp.name "4-methanoyl-~{N}-[(1-methylimidazol-2-yl)methyl]benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H13 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-09 _chem_comp.pdbx_modified_date 2021-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 243.261 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V3T _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7O5U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V3T C01 C1 C 0 1 N N N 23.902 23.080 2.381 3.658 -0.228 -2.151 C01 V3T 1 V3T C03 C2 C 0 1 Y N N 25.340 24.534 3.702 4.766 -1.456 -0.237 C03 V3T 2 V3T C04 C3 C 0 1 Y N N 26.667 24.766 3.873 4.674 -1.396 1.105 C04 V3T 3 V3T C06 C4 C 0 1 Y N N 26.419 23.200 2.396 3.306 0.077 0.320 C06 V3T 4 V3T C07 C5 C 0 1 N N N 26.809 22.125 1.367 2.276 1.173 0.243 C07 V3T 5 V3T C09 C6 C 0 1 N N N 25.531 20.865 -0.423 -0.149 1.378 0.119 C09 V3T 6 V3T C10 C7 C 0 1 Y N N 24.483 20.973 -1.517 -1.503 0.780 0.067 C10 V3T 7 V3T C11 C8 C 0 1 Y N N 23.448 20.055 -1.552 -2.627 1.604 -0.008 C11 V3T 8 V3T C12 C9 C 0 1 Y N N 22.475 20.163 -2.531 -3.887 1.049 -0.057 C12 V3T 9 V3T C13 C10 C 0 1 Y N N 22.544 21.187 -3.460 -4.040 -0.340 -0.032 C13 V3T 10 V3T C14 C11 C 0 1 Y N N 23.574 22.114 -3.417 -2.913 -1.165 0.043 C14 V3T 11 V3T C15 C12 C 0 1 Y N N 24.544 22.011 -2.437 -1.654 -0.608 0.087 C15 V3T 12 V3T C16 C13 C 0 1 N N N 21.465 21.284 -4.532 -5.387 -0.935 -0.078 C16 V3T 13 V3T N02 N1 N 0 1 Y N N 25.193 23.587 2.811 3.898 -0.522 -0.736 N02 V3T 14 V3T N05 N2 N 0 1 Y N N 27.311 23.945 3.071 3.771 -0.454 1.417 N05 V3T 15 V3T N08 N3 N 0 1 N N N 25.858 22.089 0.274 0.936 0.582 0.191 N08 V3T 16 V3T O17 O1 O 0 1 N N N 26.046 19.835 -0.141 -0.017 2.585 0.096 O17 V3T 17 V3T H1 H1 H 0 1 N N N 23.102 23.612 2.917 4.345 0.550 -2.482 H1 V3T 18 V3T H2 H2 H 0 1 N N N 23.788 23.240 1.299 3.817 -1.129 -2.742 H2 V3T 19 V3T H3 H3 H 0 1 N N N 23.839 22.004 2.602 2.631 0.116 -2.280 H3 V3T 20 V3T H4 H4 H 0 1 N N N 24.540 25.046 4.216 5.405 -2.112 -0.810 H4 V3T 21 V3T H5 H5 H 0 1 N N N 27.111 25.489 4.542 5.230 -2.000 1.807 H5 V3T 22 V3T H6 H6 H 0 1 N N N 26.827 21.143 1.861 2.357 1.811 1.123 H6 V3T 23 V3T H7 H7 H 0 1 N N N 27.808 22.354 0.968 2.445 1.769 -0.655 H7 V3T 24 V3T H8 H8 H 0 1 N N N 23.400 19.261 -0.822 -2.509 2.677 -0.028 H8 V3T 25 V3T H9 H9 H 0 1 N N N 21.664 19.450 -2.570 -4.756 1.687 -0.114 H9 V3T 26 V3T H10 H10 H 0 1 N N N 23.618 22.911 -4.144 -3.030 -2.238 0.063 H10 V3T 27 V3T H11 H11 H 0 1 N N N 25.345 22.734 -2.387 -0.783 -1.244 0.144 H11 V3T 28 V3T H12 H12 H 0 1 N N N 20.440 21.004 -4.336 -6.257 -0.298 -0.136 H12 V3T 29 V3T H15 H15 H 0 1 N N N 25.413 22.939 -0.008 0.831 -0.382 0.209 H15 V3T 30 V3T O1 O2 O 0 1 N Y N 21.884 21.766 -5.810 -5.519 -2.140 -0.052 O1 V3T 31 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V3T C16 C13 SING N N 1 V3T C13 C14 DOUB Y N 2 V3T C13 C12 SING Y N 3 V3T C14 C15 SING Y N 4 V3T C12 C11 DOUB Y N 5 V3T C15 C10 DOUB Y N 6 V3T C11 C10 SING Y N 7 V3T C10 C09 SING N N 8 V3T C09 O17 DOUB N N 9 V3T C09 N08 SING N N 10 V3T N08 C07 SING N N 11 V3T C07 C06 SING N N 12 V3T C01 N02 SING N N 13 V3T C06 N02 SING Y N 14 V3T C06 N05 DOUB Y N 15 V3T N02 C03 SING Y N 16 V3T N05 C04 SING Y N 17 V3T C03 C04 DOUB Y N 18 V3T C01 H1 SING N N 19 V3T C01 H2 SING N N 20 V3T C01 H3 SING N N 21 V3T C03 H4 SING N N 22 V3T C04 H5 SING N N 23 V3T C07 H6 SING N N 24 V3T C07 H7 SING N N 25 V3T C11 H8 SING N N 26 V3T C12 H9 SING N N 27 V3T C14 H10 SING N N 28 V3T C15 H11 SING N N 29 V3T C16 H12 SING N N 30 V3T N08 H15 SING N N 31 V3T C16 O1 DOUB N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V3T InChI InChI 1.03 "InChI=1S/C13H13N3O2/c1-16-7-6-14-12(16)8-15-13(18)11-4-2-10(9-17)3-5-11/h2-7,9H,8H2,1H3,(H,15,18)" V3T InChIKey InChI 1.03 NFZAMDZEFTZCEP-UHFFFAOYSA-N V3T SMILES_CANONICAL CACTVS 3.385 "Cn1ccnc1CNC(=O)c2ccc(C=O)cc2" V3T SMILES CACTVS 3.385 "Cn1ccnc1CNC(=O)c2ccc(C=O)cc2" V3T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1ccnc1CNC(=O)c2ccc(cc2)C=O" V3T SMILES "OpenEye OEToolkits" 2.0.7 "Cn1ccnc1CNC(=O)c2ccc(cc2)C=O" # _pdbx_chem_comp_identifier.comp_id V3T _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-methanoyl-~{N}-[(1-methylimidazol-2-yl)methyl]benzamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V3T "Create component" 2021-04-09 PDBE V3T "Initial release" 2021-06-09 RCSB ##