data_V3X # _chem_comp.id V3X _chem_comp.name "(2~{S})-~{N}-[(2~{S})-1-(4-fluoranyl-1~{H}-indol-3-yl)-3-oxidanyl-propan-2-yl]-3-methyl-2-sulfanyl-butanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H21 F N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-05 _chem_comp.pdbx_modified_date 2024-04-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 324.414 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V3X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8JRL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V3X CA C1 C 0 1 N N S N N N 48.336 85.091 129.164 -2.276 -0.929 -0.022 CA V3X 1 V3X C C2 C 0 1 N N N N N N 48.739 86.521 128.825 -1.688 0.338 0.544 C V3X 2 V3X O O1 O 0 1 N N N N N N 49.121 86.790 127.690 -2.094 0.777 1.599 O V3X 3 V3X CB C3 C 0 1 N N N N N N 46.994 84.686 128.536 -3.771 -0.985 0.300 CB V3X 4 V3X CG1 C4 C 0 1 N N N N N N 47.064 84.746 127.018 -4.472 0.225 -0.320 CG1 V3X 5 V3X CG2 C5 C 0 1 N N N N N N 45.869 85.568 129.051 -4.368 -2.271 -0.275 CG2 V3X 6 V3X CAA C6 C 0 1 Y N N N N N 43.066 90.392 130.149 2.141 -1.967 -1.617 CAA V3X 7 V3X CAB C7 C 0 1 Y N N N N N 42.400 90.032 128.978 3.048 -2.641 -0.811 CAB V3X 8 V3X CAC C8 C 0 1 Y N N N N N 43.079 89.534 127.888 3.596 -2.030 0.296 CAC V3X 9 V3X CAD C9 C 0 1 Y N N N N N 44.460 89.400 127.992 3.241 -0.723 0.614 CAD V3X 10 V3X CAE C10 C 0 1 Y N N N N N 45.158 89.755 129.165 2.323 -0.038 -0.200 CAE V3X 11 V3X CAF C11 C 0 1 Y N N N N N 44.435 90.259 130.251 1.775 -0.671 -1.320 CAF V3X 12 V3X CAH C12 C 0 1 Y N N N N N 46.628 88.999 127.652 2.955 1.331 1.480 CAH V3X 13 V3X CAI C13 C 0 1 Y N N N N N 46.552 89.490 128.922 2.164 1.291 0.396 CAI V3X 14 V3X CAJ C14 C 0 1 N N N N N N 47.686 89.706 129.877 1.282 2.402 -0.112 CAJ V3X 15 V3X CAK C15 C 0 1 N N S N N N 48.929 88.851 129.587 -0.137 2.214 0.428 CAK V3X 16 V3X CAL C16 C 0 1 N N N N N N 50.077 89.262 130.500 -1.002 3.406 0.016 CAL V3X 17 V3X F1 F1 F 0 1 N N N N N N 45.046 90.611 131.391 0.896 -0.016 -2.110 F1 V3X 18 V3X NAG N1 N 0 1 Y N N N N N 45.383 88.942 127.087 3.606 0.136 1.627 NAG V3X 19 V3X NAM N2 N 0 1 N N N N N N 48.633 87.441 129.788 -0.709 0.982 -0.122 NAM V3X 20 V3X OAV O2 O 0 1 N N N N N N 49.804 88.984 131.859 -0.949 3.566 -1.403 OAV V3X 21 V3X S1 S1 S 0 1 N N N N N N 48.403 84.710 130.938 -1.445 -2.364 0.715 S1 V3X 22 V3X H1 H1 H 0 1 N N N N N N 49.100 84.434 128.722 -2.136 -0.943 -1.102 H1 V3X 23 V3X H2 H2 H 0 1 N N N N N N 46.780 83.648 128.830 -3.910 -0.971 1.381 H2 V3X 24 V3X H3 H3 H 0 1 N N N N N N 47.882 84.103 126.662 -5.537 0.185 -0.091 H3 V3X 25 V3X H4 H4 H 0 1 N N N N N N 46.112 84.396 126.593 -4.046 1.141 0.089 H4 V3X 26 V3X H5 H5 H 0 1 N N N N N N 47.248 85.783 126.700 -4.332 0.211 -1.401 H5 V3X 27 V3X H6 H6 H 0 1 N N N N N N 45.833 85.513 130.149 -3.941 -3.132 0.240 H6 V3X 28 V3X H7 H7 H 0 1 N N N N N N 46.048 86.608 128.742 -5.449 -2.264 -0.134 H7 V3X 29 V3X H8 H8 H 0 1 N N N N N N 44.912 85.221 128.635 -4.141 -2.333 -1.339 H8 V3X 30 V3X H9 H9 H 0 1 N N N N N N 42.503 90.779 130.986 1.724 -2.458 -2.483 H9 V3X 31 V3X H10 H10 H 0 1 N N N N N N 41.327 90.146 128.924 3.327 -3.656 -1.053 H10 V3X 32 V3X H11 H11 H 0 1 N N N N N N 42.557 89.257 126.984 4.300 -2.565 0.915 H11 V3X 33 V3X H12 H12 H 0 1 N N N N N N 47.542 88.698 127.161 3.061 2.181 2.139 H12 V3X 34 V3X H13 H13 H 0 1 N N N N N N 47.978 90.765 129.831 1.675 3.361 0.226 H13 V3X 35 V3X H14 H14 H 0 1 N N N N N N 47.333 89.467 130.891 1.262 2.381 -1.202 H14 V3X 36 V3X H15 H15 H 0 1 N N N N N N 49.232 89.019 128.543 -0.106 2.146 1.515 H15 V3X 37 V3X H16 H16 H 0 1 N N N N N N 50.982 88.713 130.201 -2.033 3.231 0.323 H16 V3X 38 V3X H17 H17 H 0 1 N N N N N N 50.250 90.342 130.387 -0.628 4.310 0.497 H17 V3X 39 V3X H18 H18 H 0 1 N N N N N N 45.179 88.618 126.163 4.231 -0.074 2.338 H18 V3X 40 V3X H19 H19 H 0 1 N N N N N N 48.334 87.145 130.695 -0.384 0.631 -0.965 H19 V3X 41 V3X H20 H20 H 0 1 N N N N N N 50.542 89.254 132.392 -1.476 4.305 -1.736 H20 V3X 42 V3X H21 H21 H 0 1 N N N N N N 49.593 85.124 131.259 -1.696 -2.218 2.028 H21 V3X 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V3X CG1 CB SING N N 1 V3X NAG CAH SING Y N 2 V3X NAG CAD SING Y N 3 V3X CAH CAI DOUB Y N 4 V3X O C DOUB N N 5 V3X CAC CAD SING Y N 6 V3X CAC CAB DOUB Y N 7 V3X CAD CAE DOUB Y N 8 V3X CB CG2 SING N N 9 V3X CB CA SING N N 10 V3X C CA SING N N 11 V3X C NAM SING N N 12 V3X CAI CAE SING Y N 13 V3X CAI CAJ SING N N 14 V3X CAB CAA SING Y N 15 V3X CA S1 SING N N 16 V3X CAE CAF SING Y N 17 V3X CAK NAM SING N N 18 V3X CAK CAJ SING N N 19 V3X CAK CAL SING N N 20 V3X CAA CAF DOUB Y N 21 V3X CAF F1 SING N N 22 V3X CAL OAV SING N N 23 V3X CA H1 SING N N 24 V3X CB H2 SING N N 25 V3X CG1 H3 SING N N 26 V3X CG1 H4 SING N N 27 V3X CG1 H5 SING N N 28 V3X CG2 H6 SING N N 29 V3X CG2 H7 SING N N 30 V3X CG2 H8 SING N N 31 V3X CAA H9 SING N N 32 V3X CAB H10 SING N N 33 V3X CAC H11 SING N N 34 V3X CAH H12 SING N N 35 V3X CAJ H13 SING N N 36 V3X CAJ H14 SING N N 37 V3X CAK H15 SING N N 38 V3X CAL H16 SING N N 39 V3X CAL H17 SING N N 40 V3X NAG H18 SING N N 41 V3X NAM H19 SING N N 42 V3X OAV H20 SING N N 43 V3X S1 H21 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V3X InChI InChI 1.06 "InChI=1S/C16H21FN2O2S/c1-9(2)15(22)16(21)19-11(8-20)6-10-7-18-13-5-3-4-12(17)14(10)13/h3-5,7,9,11,15,18,20,22H,6,8H2,1-2H3,(H,19,21)/t11-,15-/m0/s1" V3X InChIKey InChI 1.06 KKPTZRIROSBPNX-NHYWBVRUSA-N V3X SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](S)C(=O)N[C@H](CO)Cc1c[nH]c2cccc(F)c12" V3X SMILES CACTVS 3.385 "CC(C)[CH](S)C(=O)N[CH](CO)Cc1c[nH]c2cccc(F)c12" V3X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](C(=O)N[C@@H](Cc1c[nH]c2c1c(ccc2)F)CO)S" V3X SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(C(=O)NC(Cc1c[nH]c2c1c(ccc2)F)CO)S" # _pdbx_chem_comp_identifier.comp_id V3X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-~{N}-[(2~{S})-1-(4-fluoranyl-1~{H}-indol-3-yl)-3-oxidanyl-propan-2-yl]-3-methyl-2-sulfanyl-butanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V3X "Create component" 2023-07-05 PDBJ V3X "Initial release" 2024-04-17 RCSB #