data_V4W # _chem_comp.id V4W _chem_comp.name "4-deoxy-L-erythro-hex-5-ulosuronic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H8 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(4S,5S)-4,5-bis(oxidanyl)-2,6-bis(oxidanylidene)hexanoic acid; (4S,5S)-4,5-Dihydroxy-2,6-dioxohexanoic acid; 4-deoxy-L-erythro-5-hexoseulose uronic acid; 440352" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-13 _chem_comp.pdbx_modified_date 2021-07-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 176.124 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V4W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7O7T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V4W O1 O1 O 0 1 N N N 4.219 -6.822 19.864 4.193 0.011 -0.623 O1 V4W 1 V4W O2 O2 O 0 1 N N N 7.451 -7.865 19.660 2.175 1.634 -0.338 O2 V4W 2 V4W C1 C1 C 0 1 N N N 5.415 -6.714 19.740 3.360 -0.392 0.153 C1 V4W 3 V4W C2 C2 C 0 1 N N S 6.264 -7.771 20.356 2.128 0.430 0.431 C2 V4W 4 V4W C3 C3 C 0 1 N N S 6.634 -7.491 21.789 0.882 -0.371 0.047 C3 V4W 5 V4W C4 C4 C 0 1 N N N 6.570 -8.815 22.434 -0.368 0.464 0.329 C4 V4W 6 V4W C5 C5 C 0 1 N N N 7.744 -9.454 21.823 -1.587 -0.275 -0.162 C5 V4W 7 V4W C6 C6 C 0 1 N N N 8.988 -8.693 21.712 -2.940 0.331 -0.004 C6 V4W 8 V4W O3 O3 O 0 1 N N N 5.812 -6.615 22.520 0.835 -1.575 0.816 O3 V4W 9 V4W O5 O4 O 0 1 N N N 7.640 -10.577 21.484 -1.467 -1.358 -0.684 O5 V4W 10 V4W O6A O5 O 0 1 N N N 9.304 -7.578 22.065 -4.028 -0.329 -0.443 O6A V4W 11 V4W O6B O6 O 0 1 N N N 9.884 -9.227 21.220 -3.060 1.418 0.519 O6B V4W 12 V4W H1 H1 H 0 1 N N N 7.995 -8.539 20.051 2.213 1.489 -1.293 H1 V4W 13 V4W H2 H2 H 0 1 N N N 5.852 -5.884 19.204 3.498 -1.342 0.648 H2 V4W 14 V4W H3 H3 H 0 1 N N N 5.722 -8.727 20.316 2.088 0.678 1.492 H3 V4W 15 V4W H4 H4 H 0 1 N N N 7.674 -7.134 21.815 0.922 -0.619 -1.014 H4 V4W 16 V4W H5 H5 H 0 1 N N N 6.668 -8.742 23.527 -0.456 0.636 1.401 H5 V4W 17 V4W H6 H6 H 0 1 N N N 5.640 -9.346 22.184 -0.291 1.420 -0.188 H6 V4W 18 V4W H7 H7 H 0 1 N N N 6.152 -6.524 23.402 0.797 -1.430 1.771 H7 V4W 19 V4W H8 H8 H 0 1 N N N 10.215 -7.423 21.847 -4.883 0.104 -0.318 H8 V4W 20 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V4W O2 C2 SING N N 1 V4W C1 O1 DOUB N N 2 V4W C1 C2 SING N N 3 V4W C2 C3 SING N N 4 V4W O6B C6 DOUB N N 5 V4W O5 C5 DOUB N N 6 V4W C6 C5 SING N N 7 V4W C6 O6A SING N N 8 V4W C3 C4 SING N N 9 V4W C3 O3 SING N N 10 V4W C5 C4 SING N N 11 V4W O2 H1 SING N N 12 V4W C1 H2 SING N N 13 V4W C2 H3 SING N N 14 V4W C3 H4 SING N N 15 V4W C4 H5 SING N N 16 V4W C4 H6 SING N N 17 V4W O3 H7 SING N N 18 V4W O6A H8 SING N N 19 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V4W InChI InChI 1.03 "InChI=1S/C6H8O6/c7-2-5(10)3(8)1-4(9)6(11)12/h2-3,5,8,10H,1H2,(H,11,12)/t3-,5+/m0/s1" V4W InChIKey InChI 1.03 IMUGYKFHMJLTOU-WVZVXSGGSA-N V4W SMILES_CANONICAL CACTVS 3.385 "O[C@@H](CC(=O)C(O)=O)[C@H](O)C=O" V4W SMILES CACTVS 3.385 "O[CH](CC(=O)C(O)=O)[CH](O)C=O" V4W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]([C@@H](C=O)O)O)C(=O)C(=O)O" V4W SMILES "OpenEye OEToolkits" 2.0.7 "C(C(C(C=O)O)O)C(=O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id V4W _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4~{S},5~{S})-4,5-bis(oxidanyl)-2,6-bis(oxidanylidene)hexanoic acid" # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 V4W "(4S,5S)-4,5-bis(oxidanyl)-2,6-bis(oxidanylidene)hexanoic acid" PDB ? 2 V4W "(4S,5S)-4,5-Dihydroxy-2,6-dioxohexanoic acid" PUBCHEM ? 3 V4W "4-deoxy-L-erythro-5-hexoseulose uronic acid" AUTHOR ? 4 V4W 440352 PUBCHEM ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V4W "Create component" 2021-04-13 PDBE V4W "Initial release" 2021-07-28 RCSB ##