data_V5E # _chem_comp.id V5E _chem_comp.name "5-Bromo-4-N-[2-(1H-imidazol-5-yl)ethyl]-2-N-[3-(morpholin-4-ylmethyl)phenyl]pyrimidine-2,4-diamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H24 Br N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "5-bromanyl-4-N-[2-(1H-imidazol-5-yl)ethyl]-2-N-[3-(morpholin-4-ylmethyl)phenyl]pyrimidine-2,4-diamine; 57593528" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-15 _chem_comp.pdbx_modified_date 2021-04-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 458.355 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V5E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7O94 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V5E C19 C1 C 0 1 Y N N 6.217 16.305 -6.133 -6.528 -4.480 -0.656 C19 V5E 1 V5E C18 C2 C 0 1 Y N N 6.175 15.878 -4.026 -5.622 -3.616 1.102 C18 V5E 2 V5E C17 C3 C 0 1 Y N N 5.517 14.862 -4.633 -5.784 -2.615 0.216 C17 V5E 3 V5E C16 C4 C 0 1 N N N 4.886 13.619 -4.050 -5.405 -1.170 0.414 C16 V5E 4 V5E C15 C5 C 0 1 N N N 4.063 12.872 -5.066 -3.931 -0.975 0.056 C15 V5E 5 V5E C14 C6 C 0 1 Y N N 1.803 12.321 -4.342 -2.268 0.849 -0.014 C14 V5E 6 V5E C13 C7 C 0 1 Y N N -0.201 17.149 -6.443 3.207 -0.898 -1.176 C13 V5E 7 V5E C12 C8 C 0 1 N N N -0.403 18.091 -9.723 7.501 -1.525 0.371 C12 V5E 8 V5E C11 C9 C 0 1 N N N -1.143 18.039 -11.060 8.036 -1.017 1.712 C11 V5E 9 V5E C10 C10 C 0 1 N N N -1.492 20.328 -11.000 5.799 -0.704 2.509 C10 V5E 10 V5E C9 C11 C 0 1 N N N -0.721 20.449 -9.721 5.241 -1.209 1.176 C9 V5E 11 V5E C8 C12 C 0 1 N N N -0.205 19.378 -7.628 5.673 -1.321 -1.205 C8 V5E 12 V5E C7 C13 C 0 1 Y N N 0.507 18.178 -7.056 4.469 -0.485 -1.555 C7 V5E 13 V5E C6 C14 C 0 1 Y N N 1.894 18.143 -7.022 4.629 0.696 -2.257 C6 V5E 14 V5E C5 C15 C 0 1 Y N N 2.562 17.118 -6.375 3.527 1.467 -2.580 C5 V5E 15 V5E C4 C16 C 0 1 Y N N 1.853 16.094 -5.770 2.263 1.059 -2.204 C4 V5E 16 V5E C3 C17 C 0 1 Y N N 0.463 16.098 -5.814 2.099 -0.127 -1.499 C3 V5E 17 V5E C2 C18 C 0 1 Y N N 0.132 13.878 -4.624 -0.112 0.381 -0.683 C2 V5E 18 V5E C1 C19 C 0 1 Y N N -0.467 11.882 -3.729 -0.603 2.558 -0.104 C1 V5E 19 V5E N N1 N 0 1 Y N N -0.844 13.106 -4.115 0.259 1.643 -0.522 N V5E 20 V5E C C20 C 0 1 Y N N 0.838 11.448 -3.823 -1.906 2.187 0.166 C V5E 21 V5E O O1 O 0 1 N N N -0.997 19.257 -11.802 7.080 -1.296 2.739 O V5E 22 V5E N1 N2 N 0 1 N N N -0.276 15.051 -5.193 0.819 -0.546 -1.122 N1 V5E 23 V5E N2 N3 N 0 1 N N N -0.884 19.232 -8.929 6.196 -0.902 0.102 N2 V5E 24 V5E N3 N4 N 0 1 Y N N 1.430 13.545 -4.750 -1.352 -0.016 -0.436 N3 V5E 25 V5E N4 N5 N 0 1 N N N 3.096 11.971 -4.456 -3.562 0.430 0.248 N4 V5E 26 V5E N5 N6 N 0 1 Y N N 6.621 16.783 -4.968 -6.085 -4.744 0.543 N5 V5E 27 V5E N6 N7 N 0 1 Y N N 5.545 15.141 -5.975 -6.359 -3.162 -0.899 N6 V5E 28 V5E BR BR1 BR 0 0 N N N 1.305 9.691 -3.297 -3.171 3.459 0.763 BR V5E 29 V5E H22 H1 H 0 1 N N N 6.399 16.781 -7.085 -6.955 -5.197 -1.341 H22 V5E 30 V5E H21 H2 H 0 1 N N N 6.328 15.967 -2.961 -5.193 -3.526 2.089 H21 V5E 31 V5E H19 H3 H 0 1 N N N 4.236 13.911 -3.212 -6.021 -0.541 -0.229 H19 V5E 32 V5E H20 H4 H 0 1 N N N 5.683 12.956 -3.682 -5.566 -0.891 1.455 H20 V5E 33 V5E H17 H5 H 0 1 N N N 4.740 12.283 -5.702 -3.314 -1.604 0.699 H17 V5E 34 V5E H18 H6 H 0 1 N N N 3.521 13.602 -5.685 -3.770 -1.253 -0.986 H18 V5E 35 V5E H15 H7 H 0 1 N N N -1.281 17.165 -6.455 3.082 -1.823 -0.632 H15 V5E 36 V5E H13 H8 H 0 1 N N N -0.585 17.158 -9.169 8.200 -1.264 -0.423 H13 V5E 37 V5E H14 H9 H 0 1 N N N 0.676 18.204 -9.907 7.385 -2.609 0.412 H14 V5E 38 V5E H11 H10 H 0 1 N N N -2.212 17.866 -10.868 8.976 -1.519 1.943 H11 V5E 39 V5E H12 H11 H 0 1 N N N -0.739 17.208 -11.658 8.203 0.059 1.653 H12 V5E 40 V5E H10 H12 H 0 1 N N N -1.403 21.269 -11.563 5.901 0.381 2.473 H10 V5E 41 V5E H9 H13 H 0 1 N N N -2.550 20.141 -10.765 5.120 -0.979 3.316 H9 V5E 42 V5E H8 H14 H 0 1 N N N 0.345 20.596 -9.949 5.089 -2.287 1.230 H8 V5E 43 V5E H7 H15 H 0 1 N N N -1.096 21.310 -9.149 4.290 -0.717 0.969 H7 V5E 44 V5E H6 H16 H 0 1 N N N 0.542 20.178 -7.738 5.385 -2.372 -1.161 H6 V5E 45 V5E H5 H17 H 0 1 N N N -0.966 19.685 -6.896 6.442 -1.187 -1.965 H5 V5E 46 V5E H4 H18 H 0 1 N N N 2.459 18.925 -7.507 5.617 1.017 -2.552 H4 V5E 47 V5E H3 H19 H 0 1 N N N 3.641 17.117 -6.342 3.656 2.389 -3.128 H3 V5E 48 V5E H2 H20 H 0 1 N N N 2.377 15.296 -5.266 1.403 1.661 -2.457 H2 V5E 49 V5E H H21 H 0 1 N N N -1.212 11.210 -3.329 -0.290 3.584 0.025 H V5E 50 V5E H1 H22 H 0 1 N N N -1.265 15.200 -5.169 0.584 -1.486 -1.168 H1 V5E 51 V5E H16 H24 H 0 1 N N N 3.116 11.127 -4.991 -4.225 1.066 0.559 H16 V5E 52 V5E H23 H26 H 0 1 N N N 5.143 14.586 -6.703 -6.599 -2.692 -1.713 H23 V5E 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V5E O C11 SING N N 1 V5E O C10 SING N N 2 V5E C11 C12 SING N N 3 V5E C10 C9 SING N N 4 V5E C12 N2 SING N N 5 V5E C9 N2 SING N N 6 V5E N2 C8 SING N N 7 V5E C8 C7 SING N N 8 V5E C7 C6 DOUB Y N 9 V5E C7 C13 SING Y N 10 V5E C6 C5 SING Y N 11 V5E C13 C3 DOUB Y N 12 V5E C5 C4 DOUB Y N 13 V5E C19 N6 SING Y N 14 V5E C19 N5 DOUB Y N 15 V5E N6 C17 SING Y N 16 V5E C3 C4 SING Y N 17 V5E C3 N1 SING N N 18 V5E N1 C2 SING N N 19 V5E C15 N4 SING N N 20 V5E C15 C16 SING N N 21 V5E N5 C18 SING Y N 22 V5E N3 C2 DOUB Y N 23 V5E N3 C14 SING Y N 24 V5E C17 C16 SING N N 25 V5E C17 C18 DOUB Y N 26 V5E C2 N SING Y N 27 V5E N4 C14 SING N N 28 V5E C14 C DOUB Y N 29 V5E N C1 DOUB Y N 30 V5E C C1 SING Y N 31 V5E C BR SING N N 32 V5E C19 H22 SING N N 33 V5E C18 H21 SING N N 34 V5E C16 H19 SING N N 35 V5E C16 H20 SING N N 36 V5E C15 H17 SING N N 37 V5E C15 H18 SING N N 38 V5E C13 H15 SING N N 39 V5E C12 H13 SING N N 40 V5E C12 H14 SING N N 41 V5E C11 H11 SING N N 42 V5E C11 H12 SING N N 43 V5E C10 H10 SING N N 44 V5E C10 H9 SING N N 45 V5E C9 H8 SING N N 46 V5E C9 H7 SING N N 47 V5E C8 H6 SING N N 48 V5E C8 H5 SING N N 49 V5E C6 H4 SING N N 50 V5E C5 H3 SING N N 51 V5E C4 H2 SING N N 52 V5E C1 H SING N N 53 V5E N1 H1 SING N N 54 V5E N4 H16 SING N N 55 V5E N6 H23 SING N N 56 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V5E InChI InChI 1.03 "InChI=1S/C20H24BrN7O/c21-18-12-24-20(27-19(18)23-5-4-17-11-22-14-25-17)26-16-3-1-2-15(10-16)13-28-6-8-29-9-7-28/h1-3,10-12,14H,4-9,13H2,(H,22,25)(H2,23,24,26,27)" V5E InChIKey InChI 1.03 IOYFYUOBKSQTFF-UHFFFAOYSA-N V5E SMILES_CANONICAL CACTVS 3.385 "Brc1cnc(Nc2cccc(CN3CCOCC3)c2)nc1NCCc4[nH]cnc4" V5E SMILES CACTVS 3.385 "Brc1cnc(Nc2cccc(CN3CCOCC3)c2)nc1NCCc4[nH]cnc4" V5E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Nc2ncc(c(n2)NCCc3cnc[nH]3)Br)CN4CCOCC4" V5E SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Nc2ncc(c(n2)NCCc3cnc[nH]3)Br)CN4CCOCC4" # _pdbx_chem_comp_identifier.comp_id V5E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-bromanyl-~{N}4-[2-(1~{H}-imidazol-5-yl)ethyl]-~{N}2-[3-(morpholin-4-ylmethyl)phenyl]pyrimidine-2,4-diamine" # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 V5E "5-bromanyl-4-N-[2-(1H-imidazol-5-yl)ethyl]-2-N-[3-(morpholin-4-ylmethyl)phenyl]pyrimidine-2,4-diamine" PDB ? 2 V5E 57593528 PUBCHEM ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V5E "Create component" 2021-04-15 PDBE V5E "Initial release" 2021-04-28 RCSB ##