data_V5P # _chem_comp.id V5P _chem_comp.name lignostilbene _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H16 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "4,4'-[(E)-ethene-1,2-diyl]bis(2-methoxyphenol)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-06-30 _chem_comp.pdbx_modified_date 2021-05-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 272.296 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V5P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6XM8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V5P C10 C1 C 0 1 Y N N 25.913 12.573 36.484 -1.898 -0.096 -0.005 C10 V5P 1 V5P C11 C2 C 0 1 Y N N 26.286 12.465 37.811 -2.126 -1.475 -0.013 C11 V5P 2 V5P C12 C3 C 0 1 Y N N 27.280 13.281 38.324 -3.417 -1.960 -0.018 C12 V5P 3 V5P C13 C4 C 0 1 Y N N 27.921 14.192 37.503 -4.491 -1.083 -0.016 C13 V5P 4 V5P C15 C5 C 0 1 Y N N 27.569 14.290 36.165 -4.272 0.293 -0.008 C15 V5P 5 V5P C02 C6 C 0 1 Y N N 21.271 8.997 33.514 4.491 1.083 0.016 C02 V5P 6 V5P C03 C7 C 0 1 Y N N 21.575 9.046 34.853 4.272 -0.293 0.008 C03 V5P 7 V5P C05 C8 C 0 1 N N N 21.451 7.876 36.938 5.030 -2.547 -0.002 C05 V5P 8 V5P C06 C9 C 0 1 Y N N 22.475 9.993 35.327 2.981 -0.788 0.002 C06 V5P 9 V5P C07 C10 C 0 1 Y N N 23.052 10.900 34.442 1.898 0.096 0.004 C07 V5P 10 V5P C08 C11 C 0 1 N N N 24.072 11.940 34.914 0.520 -0.425 -0.001 C08 V5P 11 V5P C09 C12 C 0 1 N N N 24.829 11.637 35.947 -0.520 0.425 0.001 C09 V5P 12 V5P C17 C13 C 0 1 N N N 29.586 14.956 35.187 -5.030 2.547 0.002 C17 V5P 13 V5P C18 C14 C 0 1 Y N N 26.573 13.470 35.649 -2.981 0.788 -0.009 C18 V5P 14 V5P C19 C15 C 0 1 Y N N 22.756 10.822 33.087 2.126 1.475 0.012 C19 V5P 15 V5P C20 C16 C 0 1 Y N N 21.854 9.878 32.622 3.417 1.960 0.018 C20 V5P 16 V5P O01 O1 O 0 1 N N N 20.352 8.030 33.094 5.761 1.567 0.027 O01 V5P 17 V5P O04 O2 O 0 1 N N N 20.918 8.107 35.665 5.328 -1.150 0.006 O04 V5P 18 V5P O14 O3 O 0 1 N N N 28.924 15.013 38.037 -5.761 -1.567 -0.021 O14 V5P 19 V5P O16 O4 O 0 1 N N N 28.221 15.211 35.340 -5.328 1.150 -0.006 O16 V5P 20 V5P H111 H1 H 0 0 N N N 25.800 11.742 38.449 -1.291 -2.160 -0.014 H111 V5P 21 V5P H121 H2 H 0 0 N N N 27.555 13.206 39.366 -3.591 -3.026 -0.024 H121 V5P 22 V5P H053 H3 H 0 0 N N N 20.842 7.124 37.460 5.959 -3.117 -0.003 H053 V5P 23 V5P H051 H4 H 0 0 N N N 22.483 7.509 36.842 4.449 -2.800 0.885 H051 V5P 24 V5P H052 H5 H 0 0 N N N 21.447 8.814 37.513 4.454 -2.791 -0.895 H052 V5P 25 V5P H061 H6 H 0 0 N N N 22.726 10.025 36.377 2.810 -1.854 -0.004 H061 V5P 26 V5P H081 H7 H 0 0 N N N 24.167 12.893 34.415 0.345 -1.491 -0.007 H081 V5P 27 V5P H091 H8 H 0 0 N N N 24.678 10.686 36.437 -0.345 1.491 0.007 H091 V5P 28 V5P H173 H9 H 0 0 N N N 30.030 15.717 34.529 -5.959 3.117 0.002 H173 V5P 29 V5P H171 H10 H 0 0 N N N 30.078 14.990 36.170 -4.453 2.791 0.894 H171 V5P 30 V5P H172 H11 H 0 0 N N N 29.725 13.960 34.742 -4.450 2.800 -0.886 H172 V5P 31 V5P H181 H12 H 0 0 N N N 26.312 13.528 34.603 -2.810 1.854 -0.002 H181 V5P 32 V5P H191 H13 H 0 0 N N N 23.231 11.500 32.393 1.291 2.160 0.014 H191 V5P 33 V5P H201 H14 H 0 0 N N N 21.608 9.831 31.571 3.591 3.026 0.025 H201 V5P 34 V5P H011 H15 H 0 0 N N N 20.062 7.522 33.842 6.135 1.711 -0.853 H011 V5P 35 V5P H141 H16 H 0 0 N N N 29.037 14.816 38.959 -6.131 -1.712 0.860 H141 V5P 36 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V5P C20 C19 DOUB Y N 1 V5P C20 C02 SING Y N 2 V5P C19 C07 SING Y N 3 V5P O01 C02 SING N N 4 V5P C02 C03 DOUB Y N 5 V5P C07 C08 SING N N 6 V5P C07 C06 DOUB Y N 7 V5P C03 C06 SING Y N 8 V5P C03 O04 SING N N 9 V5P C08 C09 DOUB N E 10 V5P C17 O16 SING N N 11 V5P O16 C15 SING N N 12 V5P C18 C15 DOUB Y N 13 V5P C18 C10 SING Y N 14 V5P O04 C05 SING N N 15 V5P C09 C10 SING N N 16 V5P C15 C13 SING Y N 17 V5P C10 C11 DOUB Y N 18 V5P C13 O14 SING N N 19 V5P C13 C12 DOUB Y N 20 V5P C11 C12 SING Y N 21 V5P C11 H111 SING N N 22 V5P C12 H121 SING N N 23 V5P C05 H053 SING N N 24 V5P C05 H051 SING N N 25 V5P C05 H052 SING N N 26 V5P C06 H061 SING N N 27 V5P C08 H081 SING N N 28 V5P C09 H091 SING N N 29 V5P C17 H173 SING N N 30 V5P C17 H171 SING N N 31 V5P C17 H172 SING N N 32 V5P C18 H181 SING N N 33 V5P C19 H191 SING N N 34 V5P C20 H201 SING N N 35 V5P O01 H011 SING N N 36 V5P O14 H141 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V5P SMILES ACDLabs 12.01 "c1(ccc(O)c(c1)OC)\C=C\c2cc(c(cc2)O)OC" V5P InChI InChI 1.03 "InChI=1S/C16H16O4/c1-19-15-9-11(5-7-13(15)17)3-4-12-6-8-14(18)16(10-12)20-2/h3-10,17-18H,1-2H3/b4-3+" V5P InChIKey InChI 1.03 KQPXJFAYGYIGRU-ONEGZZNKSA-N V5P SMILES_CANONICAL CACTVS 3.385 "COc1cc(ccc1O)\C=C\c2ccc(O)c(OC)c2" V5P SMILES CACTVS 3.385 "COc1cc(ccc1O)C=Cc2ccc(O)c(OC)c2" V5P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1O)/C=C/c2ccc(c(c2)OC)O" V5P SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1O)C=Cc2ccc(c(c2)OC)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier V5P "SYSTEMATIC NAME" ACDLabs 12.01 "4,4'-[(E)-ethene-1,2-diyl]bis(2-methoxyphenol)" V5P "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-methoxy-4-[(~{E})-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]phenol" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id V5P _pdbx_chem_comp_synonyms.name "4,4'-[(E)-ethene-1,2-diyl]bis(2-methoxyphenol)" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V5P "Create component" 2020-06-30 RCSB V5P "Modify synonyms" 2021-03-13 RCSB V5P "Initial release" 2021-05-12 RCSB ##