data_V7G # _chem_comp.id V7G _chem_comp.name "N-[(2S)-1-({(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H35 N5 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms GRL-024-20 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-07-13 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 577.694 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V7G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6XR3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V7G C02 C1 C 0 1 N N S N N N 7.679 30.320 20.069 3.641 0.293 1.322 C02 V7G 1 V7G C03 C2 C 0 1 Y N N N N N 8.127 31.052 21.340 4.882 -0.428 0.862 C03 V7G 2 V7G C05 C3 C 0 1 Y N N N N N 9.591 31.843 22.900 6.297 -2.165 0.659 C05 V7G 3 V7G C06 C4 C 0 1 Y N N N N N 10.850 32.065 23.505 6.834 -3.459 0.811 C06 V7G 4 V7G C07 C5 C 0 1 Y N N N N N 10.915 32.783 24.691 8.027 -3.782 0.240 C07 V7G 5 V7G C08 C6 C 0 1 Y N N N N N 9.743 33.263 25.283 8.736 -2.847 -0.501 C08 V7G 6 V7G C09 C7 C 0 1 Y N N N N N 8.499 33.039 24.685 8.236 -1.576 -0.666 C09 V7G 7 V7G C10 C8 C 0 1 Y N N N N N 8.420 32.313 23.483 7.016 -1.227 -0.089 C10 V7G 8 V7G C12 C9 C 0 1 N N S N N N 7.952 28.825 20.268 2.671 0.439 0.147 C12 V7G 9 V7G C13 C10 C 0 1 N N N N N N 7.518 28.032 19.056 3.294 1.343 -0.919 C13 V7G 10 V7G C14 C11 C 0 1 N N S N N N 8.129 26.583 19.073 2.407 1.347 -2.165 C14 V7G 11 V7G C15 C12 C 0 1 N N N N N N 9.404 26.516 19.019 3.191 1.881 -3.386 C15 V7G 12 V7G C16 C13 C 0 1 N N N N N N 9.752 25.060 18.198 2.100 2.673 -4.140 C16 V7G 13 V7G C18 C14 C 0 1 N N N N N N 7.582 25.792 17.777 1.264 2.324 -1.999 C18 V7G 14 V7G C21 C15 C 0 1 N N N N N N 7.806 27.850 22.570 0.247 0.409 0.386 C21 V7G 15 V7G C22 C16 C 0 1 N N S N N N 6.918 27.481 23.745 -1.028 0.952 0.977 C22 V7G 16 V7G C23 C17 C 0 1 N N N N N N 6.941 28.611 24.786 -0.916 0.968 2.503 C23 V7G 17 V7G C24 C18 C 0 1 N N N N N N 6.006 28.375 25.958 -2.158 1.634 3.099 C24 V7G 18 V7G C25 C19 C 0 1 N N N N N N 6.244 29.389 27.073 -2.105 1.539 4.625 C25 V7G 19 V7G C26 C20 C 0 1 N N N N N N 4.544 28.461 25.508 -2.198 3.105 2.681 C26 V7G 20 V7G C28 C21 C 0 1 N N N N N N 7.117 25.023 23.631 -3.400 0.611 0.536 C28 V7G 21 V7G C29 C22 C 0 1 Y N N N N N 7.546 23.716 24.246 -4.528 -0.241 0.137 C29 V7G 22 V7G C30 C23 C 0 1 Y N N N N N 8.205 23.577 25.465 -5.826 0.155 0.056 C30 V7G 23 V7G C31 C24 C 0 1 Y N N N N N 8.409 22.191 25.661 -6.591 -0.958 -0.362 C31 V7G 24 V7G C32 C25 C 0 1 Y N N N N N 9.037 21.444 26.694 -7.961 -1.147 -0.615 C32 V7G 25 V7G C34 C26 C 0 1 N N N N N N 10.117 21.398 28.814 -10.209 -0.385 -0.735 C34 V7G 26 V7G C35 C27 C 0 1 Y N N N N N 9.092 20.064 26.590 -8.415 -2.386 -1.023 C35 V7G 27 V7G C36 C28 C 0 1 Y N N N N N 8.544 19.416 25.482 -7.529 -3.441 -1.183 C36 V7G 28 V7G C37 C29 C 0 1 Y N N N N N 7.938 20.150 24.460 -6.183 -3.273 -0.938 C37 V7G 29 V7G C38 C30 C 0 1 Y N N N N N 7.882 21.558 24.566 -5.698 -2.035 -0.527 C38 V7G 30 V7G N04 N1 N 0 1 Y N N N N N 9.458 31.098 21.671 5.149 -1.648 1.138 N04 V7G 31 V7G N17 N2 N 0 1 N N N N N N 8.755 24.853 17.332 1.120 3.059 -3.118 N17 V7G 32 V7G N20 N3 N 0 1 N N N N N N 7.182 28.415 21.416 1.418 1.033 0.620 N20 V7G 33 V7G N27 N4 N 0 1 N N N N N N 7.347 26.243 24.343 -2.153 0.102 0.579 N27 V7G 34 V7G N39 N5 N 0 1 Y N N N N N 7.357 22.505 23.728 -4.439 -1.574 -0.223 N39 V7G 35 V7G O01 O1 O 0 1 N N N N N N 8.375 30.857 18.987 3.996 1.588 1.810 O01 V7G 36 V7G O19 O2 O 0 1 N N N N N N 6.523 25.890 17.271 0.579 2.429 -1.003 O19 V7G 37 V7G O33 O3 O 0 1 N N N N N N 9.550 22.161 27.784 -8.833 -0.117 -0.459 O33 V7G 38 V7G O40 O4 O 0 1 N N N N N N 6.624 25.063 22.538 -3.592 1.776 0.829 O40 V7G 39 V7G O41 O5 O 0 1 N N N N N N 8.985 27.669 22.571 0.218 -0.591 -0.301 O41 V7G 40 V7G S11 S1 S 0 1 Y N N N N N 7.156 31.830 22.490 6.103 0.278 -0.099 S11 V7G 41 V7G H1 H1 H 0 1 N Y N N N N 6.596 30.466 19.943 3.163 -0.277 2.118 H1 V7G 42 V7G H061 H2 H 0 0 N N N N N N 11.750 31.680 23.049 6.295 -4.200 1.385 H061 V7G 43 V7G H071 H3 H 0 0 N N N N N N 11.871 32.971 25.157 8.427 -4.778 0.366 H071 V7G 44 V7G H081 H39 H 0 0 N N N N N N 9.799 33.812 26.211 9.682 -3.117 -0.947 H081 V7G 45 V7G H091 H4 H 0 0 N N N N N N 7.601 33.423 25.145 8.788 -0.848 -1.243 H091 V7G 46 V7G H121 H5 H 0 0 N N N N N N 9.026 28.671 20.446 2.470 -0.542 -0.282 H121 V7G 47 V7G H131 H6 H 0 0 N N N N N N 7.855 28.553 18.148 3.378 2.358 -0.530 H131 V7G 48 V7G H132 H7 H 0 0 N N N N N N 6.420 27.958 19.050 4.284 0.970 -1.178 H132 V7G 49 V7G H141 H8 H 0 0 N N N N N N 7.731 26.066 19.959 2.027 0.345 -2.365 H141 V7G 50 V7G H151 H9 H 0 0 N N N N N N 9.831 26.497 20.033 4.003 2.538 -3.071 H151 V7G 51 V7G H152 H10 H 0 0 N N N N N N 9.811 27.375 18.466 3.570 1.061 -3.996 H152 V7G 52 V7G H162 H11 H 0 0 N N N N N N 9.810 24.227 18.914 2.531 3.561 -4.603 H162 V7G 53 V7G H161 H12 H 0 0 N N N N N N 10.708 25.148 17.660 1.631 2.043 -4.896 H161 V7G 54 V7G H221 H13 H 0 0 N N N N N N 5.886 27.372 23.380 -1.193 1.967 0.615 H221 V7G 55 V7G H231 H14 H 0 0 N N N N N N 7.966 28.707 25.173 -0.840 -0.055 2.872 H231 V7G 56 V7G H232 H15 H 0 0 N N N N N N 6.647 29.548 24.290 -0.028 1.527 2.797 H232 V7G 57 V7G H241 H16 H 0 0 N N N N N N 6.189 27.366 26.357 -3.052 1.129 2.734 H241 V7G 58 V7G H253 H17 H 0 0 N N N N N N 5.552 29.190 27.904 -1.212 2.045 4.990 H253 V7G 59 V7G H251 H18 H 0 0 N N N N N N 7.281 29.304 27.431 -2.990 2.014 5.049 H251 V7G 60 V7G H252 H19 H 0 0 N N N N N N 6.071 30.405 26.688 -2.077 0.491 4.923 H252 V7G 61 V7G H262 H20 H 0 0 N N N N N N 3.884 28.287 26.370 -2.235 3.173 1.594 H262 V7G 62 V7G H263 H21 H 0 0 N N N N N N 4.347 29.460 25.091 -3.082 3.580 3.105 H263 V7G 63 V7G H261 H22 H 0 0 N N N N N N 4.352 27.698 24.739 -1.304 3.611 3.046 H261 V7G 64 V7G H301 H23 H 0 0 N N N N N N 8.503 24.373 26.131 -6.205 1.143 0.272 H301 V7G 65 V7G H343 H24 H 0 0 N N N N N N 10.482 22.066 29.608 -10.795 0.519 -0.572 H343 V7G 66 V7G H342 H25 H 0 0 N N N N N N 9.357 20.719 29.228 -10.316 -0.705 -1.771 H342 V7G 67 V7G H341 H26 H 0 0 N N N N N N 10.957 20.810 28.415 -10.566 -1.174 -0.072 H341 V7G 68 V7G H351 H27 H 0 0 N N N N N N 9.562 19.485 27.372 -9.467 -2.534 -1.218 H351 V7G 69 V7G H361 H28 H 0 0 N N N N N N 8.589 18.339 25.414 -7.897 -4.405 -1.501 H361 V7G 70 V7G H371 H29 H 0 0 N N N N N N 7.518 19.648 23.601 -5.504 -4.102 -1.067 H371 V7G 71 V7G H171 H30 H 0 0 N N N N N N 8.757 24.224 16.555 0.452 3.753 -3.235 H171 V7G 72 V7G H201 H31 H 0 0 N N N N N N 6.189 28.529 21.404 1.431 1.875 1.101 H201 V7G 73 V7G H271 H32 H 0 0 N N N N N N 7.796 26.236 25.237 -2.000 -0.827 0.346 H271 V7G 74 V7G H391 H33 H 0 0 N N N N N N 6.901 22.315 22.859 -3.623 -2.097 -0.252 H391 V7G 75 V7G H011 H34 H 0 0 N N N N N N 8.172 31.782 18.907 4.427 2.152 1.153 H011 V7G 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V7G O19 C18 DOUB N N 1 V7G N17 C18 SING N N 2 V7G N17 C16 SING N N 3 V7G C18 C14 SING N N 4 V7G C16 C15 SING N N 5 V7G O01 C02 SING N N 6 V7G C15 C14 SING N N 7 V7G C13 C14 SING N N 8 V7G C13 C12 SING N N 9 V7G C02 C12 SING N N 10 V7G C02 C03 SING N N 11 V7G C12 N20 SING N N 12 V7G C03 N04 DOUB Y N 13 V7G C03 S11 SING Y N 14 V7G N20 C21 SING N N 15 V7G N04 C05 SING Y N 16 V7G S11 C10 SING Y N 17 V7G O40 C28 DOUB N N 18 V7G C21 O41 DOUB N N 19 V7G C21 C22 SING N N 20 V7G C05 C10 DOUB Y N 21 V7G C05 C06 SING Y N 22 V7G C10 C09 SING Y N 23 V7G C06 C07 DOUB Y N 24 V7G C28 C29 SING N N 25 V7G C28 N27 SING N N 26 V7G N39 C29 SING Y N 27 V7G N39 C38 SING Y N 28 V7G C22 N27 SING N N 29 V7G C22 C23 SING N N 30 V7G C29 C30 DOUB Y N 31 V7G C37 C38 DOUB Y N 32 V7G C37 C36 SING Y N 33 V7G C38 C31 SING Y N 34 V7G C09 C08 DOUB Y N 35 V7G C07 C08 SING Y N 36 V7G C23 C24 SING N N 37 V7G C30 C31 SING Y N 38 V7G C36 C35 DOUB Y N 39 V7G C26 C24 SING N N 40 V7G C31 C32 DOUB Y N 41 V7G C24 C25 SING N N 42 V7G C35 C32 SING Y N 43 V7G C32 O33 SING N N 44 V7G O33 C34 SING N N 45 V7G C02 H1 SING N N 46 V7G C06 H061 SING N N 47 V7G C07 H071 SING N N 48 V7G C08 H081 SING N N 49 V7G C09 H091 SING N N 50 V7G C12 H121 SING N N 51 V7G C13 H131 SING N N 52 V7G C13 H132 SING N N 53 V7G C14 H141 SING N N 54 V7G C15 H151 SING N N 55 V7G C15 H152 SING N N 56 V7G C16 H162 SING N N 57 V7G C16 H161 SING N N 58 V7G C22 H221 SING N N 59 V7G C23 H231 SING N N 60 V7G C23 H232 SING N N 61 V7G C24 H241 SING N N 62 V7G C25 H253 SING N N 63 V7G C25 H251 SING N N 64 V7G C25 H252 SING N N 65 V7G C26 H262 SING N N 66 V7G C26 H263 SING N N 67 V7G C26 H261 SING N N 68 V7G C30 H301 SING N N 69 V7G C34 H343 SING N N 70 V7G C34 H342 SING N N 71 V7G C34 H341 SING N N 72 V7G C35 H351 SING N N 73 V7G C36 H361 SING N N 74 V7G C37 H371 SING N N 75 V7G N17 H171 SING N N 76 V7G N20 H201 SING N N 77 V7G N27 H271 SING N N 78 V7G N39 H391 SING N N 79 V7G O01 H011 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V7G SMILES ACDLabs 12.01 "C(C(NC(=O)C(NC(c2cc1c(OC)cccc1n2)=O)CC(C)C)CC3CCNC3=O)(c5nc4c(cccc4)s5)O" V7G InChI InChI 1.03 "InChI=1S/C30H35N5O5S/c1-16(2)13-22(34-29(39)23-15-18-19(32-23)8-6-9-24(18)40-3)28(38)33-21(14-17-11-12-31-27(17)37)26(36)30-35-20-7-4-5-10-25(20)41-30/h4-10,15-17,21-22,26,32,36H,11-14H2,1-3H3,(H,31,37)(H,33,38)(H,34,39)/t17-,21-,22-,26-/m0/s1" V7G InChIKey InChI 1.03 DHQWCSDZTRDSRP-XIBGDNMGSA-N V7G SMILES_CANONICAL CACTVS 3.385 "COc1cccc2[nH]c(cc12)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@H](O)c4sc5ccccc5n4" V7G SMILES CACTVS 3.385 "COc1cccc2[nH]c(cc12)C(=O)N[CH](CC(C)C)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)c4sc5ccccc5n4" V7G SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@@H](c2nc3ccccc3s2)O)NC(=O)c4cc5c([nH]4)cccc5OC" V7G SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(c2nc3ccccc3s2)O)NC(=O)c4cc5c([nH]4)cccc5OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier V7G "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2S)-1-({(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide" V7G "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2~{S})-1-[[(1~{S},2~{S})-1-(1,3-benzothiazol-2-yl)-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1~{H}-indole-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V7G "Create component" 2020-07-13 RCSB V7G "Modify leaving atom flag" 2020-07-15 RCSB V7G "Initial release" 2020-08-19 RCSB V7G "Modify synonyms" 2021-03-01 PDBE V7G "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id V7G _pdbx_chem_comp_synonyms.name GRL-024-20 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id V7G _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C02 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #