data_V96 # _chem_comp.id V96 _chem_comp.name "7-[5-[(2~{S})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]-2-oxidanyl-phenyl]-3,5,6,8-tetrakis(oxidanyl)-9,10-bis(oxidanylidene)anthracene-1,2-dicarboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H17 N O13" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-11 _chem_comp.pdbx_modified_date 2023-08-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 539.401 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V96 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8JYH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V96 N N1 N 0 1 N N N 20.929 15.888 4.808 -4.792 -2.389 -0.891 N V96 1 V96 CA C1 C 0 1 N N S 21.886 15.830 3.688 -6.122 -1.906 -0.494 CA V96 2 V96 C C2 C 0 1 N N N 21.643 17.017 2.758 -7.172 -2.563 -1.352 C V96 3 V96 O O1 O 0 1 N N N 20.514 17.551 2.821 -8.448 -2.603 -0.939 O V96 4 V96 CB C3 C 0 1 N N N 21.792 14.518 2.873 -6.189 -0.389 -0.677 CB V96 5 V96 CG C4 C 0 1 Y N N 20.548 14.493 2.258 -5.224 0.275 0.272 CG V96 6 V96 CD1 C5 C 0 1 Y N N 19.406 14.096 2.952 -3.925 0.515 -0.126 CD1 V96 7 V96 CD2 C6 C 0 1 Y N N 20.468 14.860 0.920 -5.646 0.646 1.537 CD2 V96 8 V96 OXT O2 O 0 1 N N N 22.540 17.290 1.937 -6.865 -3.053 -2.414 OXT V96 9 V96 CAA C7 C 0 1 Y N N 9.628 14.468 4.473 5.423 -0.773 -0.211 CAA V96 10 V96 CAB C8 C 0 1 Y N N 9.883 13.518 5.454 5.735 0.442 -0.833 CAB V96 11 V96 CAC C9 C 0 1 Y N N 11.130 12.996 5.684 4.743 1.392 -1.051 CAC V96 12 V96 CAD C10 C 0 1 Y N N 12.216 13.396 4.941 3.434 1.143 -0.655 CAD V96 13 V96 CAE C11 C 0 1 Y N N 12.062 14.367 3.926 3.106 -0.073 -0.029 CAE V96 14 V96 CAF C12 C 0 1 Y N N 10.726 14.893 3.628 4.101 -1.036 0.188 CAF V96 15 V96 CAG C13 C 0 1 N N N 13.438 12.788 5.281 2.383 2.159 -0.890 CAG V96 16 V96 CAH C14 C 0 1 Y N N 14.589 13.107 4.603 0.998 1.894 -0.470 CAH V96 17 V96 CAI C15 C 0 1 Y N N 14.511 14.032 3.587 0.672 0.671 0.158 CAI V96 18 V96 CAJ C16 C 0 1 N N N 13.290 14.647 3.240 1.716 -0.338 0.392 CAJ V96 19 V96 CAK C17 C 0 1 Y N N 15.823 12.530 4.905 0.003 2.850 -0.691 CAK V96 20 V96 CAL C18 C 0 1 Y N N 16.988 12.893 4.239 -1.311 2.595 -0.291 CAL V96 21 V96 CAM C19 C 0 1 Y N N 16.965 13.739 3.111 -1.636 1.390 0.329 CAM V96 22 V96 CAN C20 C 0 1 Y N N 15.697 14.345 2.900 -0.644 0.423 0.555 CAN V96 23 V96 CAQ C21 C 0 1 N N N 10.507 15.912 2.648 3.764 -2.318 0.845 CAQ V96 24 V96 CAT C22 C 0 1 N N N 8.239 14.793 4.474 6.479 -1.779 0.019 CAT V96 25 V96 CBA C23 C 0 1 Y N N 18.124 14.200 2.414 -3.031 1.129 0.751 CBA V96 26 V96 CBE C24 C 0 1 Y N N 19.233 14.870 0.308 -4.769 1.255 2.414 CBE V96 27 V96 CBF C25 C 0 1 Y N N 18.106 14.505 1.033 -3.460 1.498 2.031 CBF V96 28 V96 OAO O3 O 0 1 N N N 15.569 15.269 1.904 -0.962 -0.748 1.158 OAO V96 29 V96 OAP O4 O 0 1 N N N 13.367 15.448 2.316 1.434 -1.391 0.933 OAP V96 30 V96 OAR O5 O 0 1 N N N 9.384 16.293 2.288 3.417 -3.271 0.176 OAR V96 31 V96 OAS O6 O 0 1 N N N 11.402 16.710 2.318 3.842 -2.429 2.185 OAS V96 32 V96 OAU O7 O 0 1 N N N 7.676 15.551 3.670 7.116 -1.765 1.053 OAU V96 33 V96 OAV O8 O 0 1 N N N 7.493 14.286 5.341 6.736 -2.713 -0.918 OAV V96 34 V96 OAW O9 O 0 1 N N N 8.827 13.098 6.201 7.009 0.694 -1.222 OAW V96 35 V96 OAX O10 O 0 1 N N N 13.512 11.954 6.179 2.664 3.212 -1.429 OAX V96 36 V96 OAY O11 O 0 1 N N N 15.913 11.612 5.912 0.314 4.025 -1.292 OAY V96 37 V96 OAZ O12 O 0 1 N N N 18.119 12.216 4.604 -2.276 3.526 -0.507 OAZ V96 38 V96 OBM O13 O 0 1 N N N 16.912 14.521 0.390 -2.598 2.097 2.893 OBM V96 39 V96 H1 H1 H 0 1 N N N 21.084 15.113 5.420 -4.701 -3.379 -0.719 H1 V96 40 V96 H2 H2 H 0 1 N N N 21.058 16.742 5.313 -4.602 -2.171 -1.858 H2 V96 41 V96 H4 H4 H 0 1 N N N 22.908 15.909 4.088 -6.301 -2.155 0.552 H4 V96 42 V96 H5 H5 H 0 1 N N N 20.436 18.208 2.140 -9.086 -3.035 -1.524 H5 V96 43 V96 H6 H6 H 0 1 N N N 21.896 13.652 3.543 -5.923 -0.134 -1.702 H6 V96 44 V96 H7 H7 H 0 1 N N N 22.587 14.491 2.113 -7.201 -0.042 -0.467 H7 V96 45 V96 H8 H8 H 0 1 N N N 19.519 13.691 3.947 -3.600 0.228 -1.115 H8 V96 46 V96 H9 H9 H 0 1 N N N 21.357 15.132 0.370 -6.665 0.458 1.840 H9 V96 47 V96 H10 H10 H 0 1 N N N 11.262 12.258 6.462 4.990 2.328 -1.531 H10 V96 48 V96 H11 H11 H 0 1 N N N 19.142 15.160 -0.728 -5.105 1.543 3.400 H11 V96 49 V96 H12 H12 H 0 1 N N N 14.663 15.548 1.845 -1.225 -1.447 0.544 H12 V96 50 V96 H13 H13 H 0 1 N N N 11.017 17.445 1.856 3.612 -3.286 2.569 H13 V96 51 V96 H14 H14 H 0 1 N N N 6.603 14.592 5.211 7.436 -3.350 -0.722 H14 V96 52 V96 H15 H15 H 0 1 N N N 9.122 12.454 6.834 7.208 0.407 -2.124 H15 V96 53 V96 H16 H16 H 0 1 N N N 15.055 11.477 6.296 0.233 4.007 -2.256 H16 V96 54 V96 H17 H17 H 0 1 N N N 17.943 11.701 5.383 -2.725 3.436 -1.358 H17 V96 55 V96 H18 H18 H 0 1 N N N 16.225 14.254 0.990 -2.110 1.479 3.454 H18 V96 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V96 CBE CD2 SING Y N 1 V96 CBE CBF DOUB Y N 2 V96 OBM CBF SING N N 3 V96 CD2 CG DOUB Y N 4 V96 CBF CBA SING Y N 5 V96 OAO CAN SING N N 6 V96 OXT C DOUB N N 7 V96 CG CB SING N N 8 V96 CG CD1 SING Y N 9 V96 OAR CAQ DOUB N N 10 V96 OAP CAJ DOUB N N 11 V96 OAS CAQ SING N N 12 V96 CBA CD1 DOUB Y N 13 V96 CBA CAM SING N N 14 V96 CAQ CAF SING N N 15 V96 C O SING N N 16 V96 C CA SING N N 17 V96 CB CA SING N N 18 V96 CAN CAM DOUB Y N 19 V96 CAN CAI SING Y N 20 V96 CAM CAL SING Y N 21 V96 CAJ CAI SING N N 22 V96 CAJ CAE SING N N 23 V96 CAI CAH DOUB Y N 24 V96 CAF CAE SING Y N 25 V96 CAF CAA DOUB Y N 26 V96 OAU CAT DOUB N N 27 V96 CA N SING N N 28 V96 CAE CAD DOUB Y N 29 V96 CAL OAZ SING N N 30 V96 CAL CAK DOUB Y N 31 V96 CAA CAT SING N N 32 V96 CAA CAB SING Y N 33 V96 CAT OAV SING N N 34 V96 CAH CAK SING Y N 35 V96 CAH CAG SING N N 36 V96 CAK OAY SING N N 37 V96 CAD CAG SING N N 38 V96 CAD CAC SING Y N 39 V96 CAG OAX DOUB N N 40 V96 CAB CAC DOUB Y N 41 V96 CAB OAW SING N N 42 V96 N H1 SING N N 43 V96 N H2 SING N N 44 V96 CA H4 SING N N 45 V96 O H5 SING N N 46 V96 CB H6 SING N N 47 V96 CB H7 SING N N 48 V96 CD1 H8 SING N N 49 V96 CD2 H9 SING N N 50 V96 CAC H10 SING N N 51 V96 CBE H11 SING N N 52 V96 OAO H12 SING N N 53 V96 OAS H13 SING N N 54 V96 OAV H14 SING N N 55 V96 OAW H15 SING N N 56 V96 OAY H16 SING N N 57 V96 OAZ H17 SING N N 58 V96 OBM H18 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V96 InChI InChI 1.06 "InChI=1S/C25H17NO13/c26-9(23(34)35)4-6-1-2-10(27)7(3-6)13-20(31)17-16(22(33)21(13)32)18(29)8-5-11(28)14(24(36)37)15(25(38)39)12(8)19(17)30/h1-3,5,9,27-28,31-33H,4,26H2,(H,34,35)(H,36,37)(H,38,39)/t9-/m0/s1" V96 InChIKey InChI 1.06 VRXULZFQCGXCRV-VIFPVBQESA-N V96 SMILES_CANONICAL CACTVS 3.385 "N[C@@H](Cc1ccc(O)c(c1)c2c(O)c(O)c3C(=O)c4cc(O)c(C(O)=O)c(C(O)=O)c4C(=O)c3c2O)C(O)=O" V96 SMILES CACTVS 3.385 "N[CH](Cc1ccc(O)c(c1)c2c(O)c(O)c3C(=O)c4cc(O)c(C(O)=O)c(C(O)=O)c4C(=O)c3c2O)C(O)=O" V96 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C[C@@H](C(=O)O)N)c2c(c3c(c(c2O)O)C(=O)c4cc(c(c(c4C3=O)C(=O)O)C(=O)O)O)O)O" V96 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1CC(C(=O)O)N)c2c(c3c(c(c2O)O)C(=O)c4cc(c(c(c4C3=O)C(=O)O)C(=O)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id V96 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-[5-[(2~{S})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]-2-oxidanyl-phenyl]-3,5,6,8-tetrakis(oxidanyl)-9,10-bis(oxidanylidene)anthracene-1,2-dicarboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V96 "Create component" 2023-07-11 PDBJ V96 "Initial release" 2023-08-16 RCSB #