data_V9E # _chem_comp.id V9E _chem_comp.name "4-chloranyl-6-[1-methyl-4-(thiophen-2-ylmethyl)pyrazol-3-yl]pyrimidin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H12 Cl N5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-27 _chem_comp.pdbx_modified_date 2023-12-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 305.786 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V9E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8CO7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V9E C01 C1 C 0 1 Y N N N N N -15.098 -26.201 2.100 3.775 -0.803 0.142 C01 V9E 1 V9E C02 C2 C 0 1 Y N N N N N -14.106 -25.722 3.254 4.102 -1.810 -0.749 C02 V9E 2 V9E C03 C3 C 0 1 Y N N N N N -13.715 -24.354 2.993 3.091 -2.612 -1.087 C03 V9E 3 V9E C05 C4 C 0 1 Y N N N N N -15.255 -25.115 1.176 2.500 -0.789 0.532 C05 V9E 4 V9E C06 C5 C 0 1 Y N N N N N -18.422 -24.265 0.697 0.115 1.498 0.114 C06 V9E 5 V9E C07 C6 C 0 1 Y N N N N N -17.599 -25.284 0.337 1.378 1.392 0.729 C07 V9E 6 V9E C08 C7 C 0 1 Y N N N N N -18.316 -26.413 0.447 2.043 2.548 0.513 C08 V9E 7 V9E C12 C8 C 0 1 Y N N N N N -16.535 -20.836 0.517 -1.562 -1.761 0.229 C12 V9E 8 V9E C14 C9 C 0 1 Y N N N N N -18.086 -22.776 0.774 -0.940 0.457 0.103 C14 V9E 9 V9E C15 C10 C 0 1 Y N N N N N -19.130 -21.882 1.276 -2.283 0.810 -0.051 C15 V9E 10 V9E C16 C11 C 0 1 Y N N N N N -18.846 -20.458 1.376 -3.234 -0.198 -0.055 C16 V9E 11 V9E C17 C12 C 0 1 N N N N N N -16.127 -25.140 -0.075 1.895 0.201 1.494 C17 V9E 12 V9E C18 C13 C 0 1 N N N N N N -20.678 -27.033 1.048 1.574 4.713 -0.663 C18 V9E 13 V9E N09 N1 N 0 1 Y N N N N N -19.549 -26.101 0.817 1.242 3.361 -0.210 N09 V9E 14 V9E N10 N2 N 0 1 Y N N N N N -19.614 -24.764 1.018 0.036 2.688 -0.446 N10 V9E 15 V9E N11 N3 N 0 1 Y N N N N N -17.583 -19.931 1.005 -2.844 -1.456 0.085 N11 V9E 16 V9E N13 N4 N 0 1 Y N N N N N -16.803 -22.239 0.420 -0.623 -0.829 0.239 N13 V9E 17 V9E N19 N5 N 0 1 N N N N N N -15.258 -20.288 0.204 -1.198 -3.088 0.378 N19 V9E 18 V9E S04 S1 S 0 1 Y N N N N N -14.402 -23.897 1.671 1.629 -2.099 -0.255 S04 V9E 19 V9E CL20 CL1 CL 0 0 N N N N N N -20.068 -19.371 1.916 -4.917 0.185 -0.242 CL20 V9E 20 V9E H011 H1 H 0 0 N N N N N N -15.568 -27.171 2.027 4.499 -0.085 0.498 H011 V9E 21 V9E H021 H2 H 0 0 N N N N N N -13.780 -26.320 4.092 5.100 -1.937 -1.142 H021 V9E 22 V9E H031 H3 H 0 0 N N N N N N -13.061 -23.754 3.608 3.160 -3.448 -1.768 H031 V9E 23 V9E H081 H4 H 0 0 N N N N N N -17.948 -27.412 0.264 3.039 2.781 0.858 H081 V9E 24 V9E H151 H5 H 0 0 N N N N N N -20.094 -22.272 1.567 -2.573 1.844 -0.162 H151 V9E 25 V9E H172 H6 H 0 0 N N N N N N -15.837 -25.992 -0.708 1.073 -0.271 2.032 H172 V9E 26 V9E H171 H7 H 0 0 N N N N N N -15.992 -24.203 -0.636 2.655 0.527 2.204 H171 V9E 27 V9E H181 H8 H 0 0 N N N N N N -21.554 -26.469 1.401 2.047 4.662 -1.644 H181 V9E 28 V9E H182 H9 H 0 0 N N N N N N -20.928 -27.547 0.108 0.663 5.308 -0.730 H182 V9E 29 V9E H183 H10 H 0 0 N N N N N N -20.391 -27.776 1.807 2.259 5.176 0.047 H183 V9E 30 V9E H191 H11 H 0 0 N N N N N N -14.639 -21.022 -0.074 -1.877 -3.780 0.377 H191 V9E 31 V9E H192 H12 H 0 0 N N N N N N -15.352 -19.630 -0.543 -0.263 -3.325 0.484 H192 V9E 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V9E C17 C07 SING N N 1 V9E C17 C05 SING N N 2 V9E N19 C12 SING N N 3 V9E C07 C08 DOUB Y N 4 V9E C07 C06 SING Y N 5 V9E N13 C12 DOUB Y N 6 V9E N13 C14 SING Y N 7 V9E C08 N09 SING Y N 8 V9E C12 N11 SING Y N 9 V9E C06 C14 SING N N 10 V9E C06 N10 DOUB Y N 11 V9E C14 C15 DOUB Y N 12 V9E N09 N10 SING Y N 13 V9E N09 C18 SING N N 14 V9E N11 C16 DOUB Y N 15 V9E C05 S04 SING Y N 16 V9E C05 C01 DOUB Y N 17 V9E C15 C16 SING Y N 18 V9E C16 CL20 SING N N 19 V9E S04 C03 SING Y N 20 V9E C01 C02 SING Y N 21 V9E C03 C02 DOUB Y N 22 V9E C01 H011 SING N N 23 V9E C02 H021 SING N N 24 V9E C03 H031 SING N N 25 V9E C08 H081 SING N N 26 V9E C15 H151 SING N N 27 V9E C17 H172 SING N N 28 V9E C17 H171 SING N N 29 V9E C18 H181 SING N N 30 V9E C18 H182 SING N N 31 V9E C18 H183 SING N N 32 V9E N19 H191 SING N N 33 V9E N19 H192 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V9E InChI InChI 1.06 "InChI=1S/C13H12ClN5S/c1-19-7-8(5-9-3-2-4-20-9)12(18-19)10-6-11(14)17-13(15)16-10/h2-4,6-7H,5H2,1H3,(H2,15,16,17)" V9E InChIKey InChI 1.06 VPCGXMWBHSCODI-UHFFFAOYSA-N V9E SMILES_CANONICAL CACTVS 3.385 "Cn1cc(Cc2sccc2)c(n1)c3cc(Cl)nc(N)n3" V9E SMILES CACTVS 3.385 "Cn1cc(Cc2sccc2)c(n1)c3cc(Cl)nc(N)n3" V9E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cc(c(n1)c2cc(nc(n2)N)Cl)Cc3cccs3" V9E SMILES "OpenEye OEToolkits" 2.0.7 "Cn1cc(c(n1)c2cc(nc(n2)N)Cl)Cc3cccs3" # _pdbx_chem_comp_identifier.comp_id V9E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-chloranyl-6-[1-methyl-4-(thiophen-2-ylmethyl)pyrazol-3-yl]pyrimidin-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V9E "Create component" 2023-02-27 PDBE V9E "Initial release" 2024-01-03 RCSB #