data_V9F # _chem_comp.id V9F _chem_comp.name "Marbostat 200" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H33 N5 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-11 _chem_comp.pdbx_modified_date 2024-08-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 547.602 _chem_comp.one_letter_code ? _chem_comp.three_letter_code V9F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QH9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal V9F C1 C1 C 0 1 N N N N N N -6.785 26.396 -4.883 -6.304 -3.279 -0.511 C1 V9F 1 V9F C10 C2 C 0 1 N N N N N N -0.980 28.937 -2.545 -2.490 2.590 0.565 C10 V9F 2 V9F C11 C3 C 0 1 N N N N N N 1.109 28.278 -1.989 -1.495 3.345 -1.596 C11 V9F 3 V9F C12 C4 C 0 1 N N S N N N 1.706 28.074 -3.356 -0.071 2.773 -1.290 C12 V9F 4 V9F C13 C5 C 0 1 N N N N N N 3.122 28.704 -3.379 0.678 2.330 -2.548 C13 V9F 5 V9F C14 C6 C 0 1 Y N N N N N 0.770 28.734 -4.333 -0.329 1.629 -0.324 C14 V9F 6 V9F C15 C7 C 0 1 Y N N N N N 0.924 29.078 -5.705 0.491 0.458 -0.094 C15 V9F 7 V9F C16 C8 C 0 1 Y N N N N N 1.952 28.889 -6.644 1.708 0.034 -0.635 C16 V9F 8 V9F C17 C9 C 0 1 Y N N N N N 1.769 29.338 -7.943 2.213 -1.172 -0.169 C17 V9F 9 V9F C18 C10 C 0 1 N N N N N N 3.869 28.351 -8.641 3.874 -2.874 -0.152 C18 V9F 10 V9F C19 C11 C 0 1 N N N N N N 4.699 28.242 -9.899 5.205 -3.222 -0.820 C19 V9F 11 V9F C2 C12 C 0 1 Y N N N N N -5.740 27.481 -4.901 -5.284 -2.461 0.180 C2 V9F 12 V9F C20 C13 C 0 1 N N N N N N 2.985 27.086 -11.269 7.441 -2.389 -1.239 C20 V9F 13 V9F C21 C14 C 0 1 N N N N N N 2.763 25.963 -12.253 8.445 -1.301 -0.850 C21 V9F 14 V9F C3 C15 C 0 1 Y N N N N N -5.892 28.734 -4.306 -4.147 -3.065 0.718 C3 V9F 15 V9F C4 C16 C 0 1 Y N N N N N -4.849 29.655 -4.313 -3.200 -2.296 1.361 C4 V9F 16 V9F C5 C17 C 0 1 Y N N N N N -3.628 29.350 -4.908 -3.375 -0.928 1.475 C5 V9F 17 V9F C6 C18 C 0 1 Y N N N N N -3.473 28.097 -5.484 -4.500 -0.323 0.945 C6 V9F 18 V9F C7 C19 C 0 1 Y N N N N N -4.515 27.186 -5.497 -5.452 -1.079 0.293 C7 V9F 19 V9F C8 C20 C 0 1 N N N N N N -2.496 30.361 -4.944 -2.336 -0.095 2.180 C8 V9F 20 V9F C9 C21 C 0 1 Y N N N N N -0.479 29.165 -3.936 -1.402 1.519 0.498 C9 V9F 21 V9F N1 N1 N 0 1 N N N N N N -7.519 26.294 -3.786 -7.401 -2.692 -1.029 N1 V9F 22 V9F N2 N2 N 0 1 Y N N N N N -1.154 29.777 -4.996 -1.336 0.360 1.211 N2 V9F 23 V9F N3 N3 N 0 1 N N S N N N -0.270 27.772 -2.015 -1.872 3.671 -0.187 N3 V9F 24 V9F N4 N4 N 0 1 N N N N N N 4.393 27.116 -10.831 6.219 -2.230 -0.438 N4 V9F 25 V9F N5 N5 N 0 1 N N N N N N 0.682 25.863 -3.004 -0.027 4.915 0.036 N5 V9F 26 V9F O1 O1 O 0 1 N N N N N N -8.705 25.579 -3.797 -8.377 -3.475 -1.691 O1 V9F 27 V9F O2 O2 O 0 1 N N N N N N -6.880 25.547 -5.766 -6.150 -4.480 -0.616 O2 V9F 28 V9F O3 O3 O 0 1 N N N N N N 2.744 29.195 -8.910 3.395 -1.628 -0.663 O3 V9F 29 V9F O4 O4 O 0 1 N N N N N N 3.179 24.700 -11.738 8.705 -1.378 0.554 O4 V9F 30 V9F C22 C22 C 0 1 N N N N N N 4.539 24.730 -11.314 7.537 -1.227 1.365 C22 V9F 31 V9F C23 C23 C 0 1 N N N N N N 4.774 25.806 -10.281 6.523 -2.314 0.998 C23 V9F 32 V9F C24 C24 C 0 1 Y N N N N N 0.576 29.990 -8.317 1.545 -1.925 0.787 C24 V9F 33 V9F C25 C25 C 0 1 Y N N N N N -0.445 30.184 -7.422 0.338 -1.522 1.333 C25 V9F 34 V9F C26 C26 C 0 1 Y N N N N N -0.275 29.721 -6.114 -0.190 -0.314 0.884 C26 V9F 35 V9F C27 C27 C 0 1 N N N N N N 1.772 26.580 -3.498 0.638 3.889 -0.547 C27 V9F 36 V9F O5 O5 O 0 1 N N N N N N 2.749 26.043 -3.985 1.845 3.842 -0.446 O5 V9F 37 V9F C28 C28 C 0 1 N N N N N N 0.769 24.378 -3.001 0.697 6.135 0.403 C28 V9F 38 V9F C29 C29 C 0 1 N N N N N N -0.455 26.490 -2.501 -1.370 4.820 0.263 C29 V9F 39 V9F O6 O6 O 0 1 N N N N N N -1.544 25.932 -2.511 -2.030 5.682 0.811 O6 V9F 40 V9F H1 H1 H 0 1 N N N N N N -0.775 29.819 -1.921 -3.406 2.249 0.082 H1 V9F 41 V9F H2 H2 H 0 1 N N N N N N -2.063 28.743 -2.561 -2.683 2.889 1.595 H2 V9F 42 V9F H3 H3 H 0 1 N N N N N N 1.695 27.726 -1.240 -1.448 4.237 -2.220 H3 V9F 43 V9F H4 H4 H 0 1 N N N N N N 1.109 29.349 -1.738 -2.152 2.589 -2.027 H4 V9F 44 V9F H5 H5 H 0 1 N N N N N N 3.765 28.188 -2.651 0.799 3.181 -3.218 H5 V9F 45 V9F H6 H6 H 0 1 N N N N N N 3.553 28.601 -4.386 1.659 1.943 -2.270 H6 V9F 46 V9F H7 H7 H 0 1 N N N N N N 3.053 29.770 -3.117 0.109 1.549 -3.053 H7 V9F 47 V9F H8 H8 H 0 1 N N N N N N 2.872 28.401 -6.358 2.230 0.616 -1.380 H8 V9F 48 V9F H9 H9 H 0 1 N N N N N N 3.520 27.352 -8.339 3.146 -3.657 -0.364 H9 V9F 49 V9F H10 H10 H 0 1 N N N N N N 4.475 28.787 -7.833 4.018 -2.794 0.925 H10 V9F 50 V9F H11 H11 H 0 1 N N N N N N 5.750 28.140 -9.592 5.526 -4.212 -0.498 H11 V9F 51 V9F H12 H12 H 0 1 N N N N N N 4.571 29.179 -10.461 5.081 -3.215 -1.903 H12 V9F 52 V9F H13 H13 H 0 1 N N N N N N 2.735 28.043 -11.749 7.197 -2.297 -2.297 H13 V9F 53 V9F H14 H14 H 0 1 N N N N N N 2.336 26.934 -10.394 7.875 -3.370 -1.050 H14 V9F 54 V9F H15 H15 H 0 1 N N N N N N 3.334 26.177 -13.168 9.374 -1.449 -1.401 H15 V9F 55 V9F H16 H16 H 0 1 N N N N N N 1.691 25.911 -12.494 8.032 -0.321 -1.090 H16 V9F 56 V9F H17 H17 H 0 1 N N N N N N -6.829 28.992 -3.835 -4.009 -4.133 0.631 H17 V9F 57 V9F H18 H18 H 0 1 N N N N N N -4.989 30.621 -3.850 -2.319 -2.763 1.778 H18 V9F 58 V9F H19 H19 H 0 1 N N N N N N -2.526 27.829 -5.928 -4.632 0.745 1.037 H19 V9F 59 V9F H20 H20 H 0 1 N N N N N N -4.376 26.229 -5.978 -6.330 -0.605 -0.121 H20 V9F 60 V9F H21 H21 H 0 1 N N N N N N -2.564 30.983 -4.040 -2.815 0.769 2.640 H21 V9F 61 V9F H22 H22 H 0 1 N N N N N N -2.629 30.993 -5.835 -1.850 -0.694 2.950 H22 V9F 62 V9F H23 H23 H 0 1 N N N N N N -7.215 26.737 -2.943 -7.522 -1.732 -0.948 H23 V9F 63 V9F H25 H25 H 0 1 N N N N N N -8.768 25.081 -4.604 -9.127 -2.966 -2.028 H25 V9F 64 V9F H26 H26 H 0 1 N N N N N N 4.799 23.754 -10.879 7.808 -1.322 2.416 H26 V9F 65 V9F H27 H27 H 0 1 N N N N N N 5.181 24.925 -12.186 7.096 -0.245 1.189 H27 V9F 66 V9F H28 H28 H 0 1 N N N N N N 4.167 25.594 -9.388 5.609 -2.168 1.573 H28 V9F 67 V9F H29 H29 H 0 1 N N N N N N 5.839 25.821 -10.005 6.943 -3.295 1.224 H29 V9F 68 V9F H30 H30 H 0 1 N N N N N N 0.464 30.345 -9.331 1.980 -2.857 1.116 H30 V9F 69 V9F H31 H31 H 0 1 N N N N N N -1.356 30.681 -7.720 -0.171 -2.118 2.076 H31 V9F 70 V9F H32 H32 H 0 1 N N N N N N -0.158 23.957 -2.586 0.002 6.852 0.841 H32 V9F 71 V9F H33 H33 H 0 1 N N N N N N 0.907 24.017 -4.031 1.474 5.893 1.127 H33 V9F 72 V9F H34 H34 H 0 1 N N N N N N 1.623 24.062 -2.384 1.153 6.569 -0.488 H34 V9F 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal V9F C21 O4 SING N N 1 V9F C21 C20 SING N N 2 V9F O4 C22 SING N N 3 V9F C22 C23 SING N N 4 V9F C20 N4 SING N N 5 V9F N4 C23 SING N N 6 V9F N4 C19 SING N N 7 V9F C19 C18 SING N N 8 V9F O3 C18 SING N N 9 V9F O3 C17 SING N N 10 V9F C24 C17 DOUB Y N 11 V9F C24 C25 SING Y N 12 V9F C17 C16 SING Y N 13 V9F C25 C26 DOUB Y N 14 V9F C16 C15 DOUB Y N 15 V9F C26 C15 SING Y N 16 V9F C26 N2 SING Y N 17 V9F O2 C1 DOUB N N 18 V9F C15 C14 SING Y N 19 V9F C7 C6 DOUB Y N 20 V9F C7 C2 SING Y N 21 V9F C6 C5 SING Y N 22 V9F N2 C8 SING N N 23 V9F N2 C9 SING Y N 24 V9F C8 C5 SING N N 25 V9F C5 C4 DOUB Y N 26 V9F C2 C1 SING N N 27 V9F C2 C3 DOUB Y N 28 V9F C1 N1 SING N N 29 V9F C14 C9 DOUB Y N 30 V9F C14 C12 SING N N 31 V9F C4 C3 SING Y N 32 V9F O5 C27 DOUB N N 33 V9F C9 C10 SING N N 34 V9F O1 N1 SING N N 35 V9F C27 C12 SING N N 36 V9F C27 N5 SING N N 37 V9F C13 C12 SING N N 38 V9F C12 C11 SING N N 39 V9F N5 C28 SING N N 40 V9F N5 C29 SING N N 41 V9F C10 N3 SING N N 42 V9F O6 C29 DOUB N N 43 V9F C29 N3 SING N N 44 V9F N3 C11 SING N N 45 V9F C10 H1 SING N N 46 V9F C10 H2 SING N N 47 V9F C11 H3 SING N N 48 V9F C11 H4 SING N N 49 V9F C13 H5 SING N N 50 V9F C13 H6 SING N N 51 V9F C13 H7 SING N N 52 V9F C16 H8 SING N N 53 V9F C18 H9 SING N N 54 V9F C18 H10 SING N N 55 V9F C19 H11 SING N N 56 V9F C19 H12 SING N N 57 V9F C20 H13 SING N N 58 V9F C20 H14 SING N N 59 V9F C21 H15 SING N N 60 V9F C21 H16 SING N N 61 V9F C3 H17 SING N N 62 V9F C4 H18 SING N N 63 V9F C6 H19 SING N N 64 V9F C7 H20 SING N N 65 V9F C8 H21 SING N N 66 V9F C8 H22 SING N N 67 V9F N1 H23 SING N N 68 V9F O1 H25 SING N N 69 V9F C22 H26 SING N N 70 V9F C22 H27 SING N N 71 V9F C23 H28 SING N N 72 V9F C23 H29 SING N N 73 V9F C24 H30 SING N N 74 V9F C25 H31 SING N N 75 V9F C28 H32 SING N N 76 V9F C28 H33 SING N N 77 V9F C28 H34 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor V9F InChI InChI 1.06 "InChI=1S/C29H33N5O6/c1-29-18-33(28(37)31(2)27(29)36)17-24-25(29)22-15-21(40-14-11-32-9-12-39-13-10-32)7-8-23(22)34(24)16-19-3-5-20(6-4-19)26(35)30-38/h3-8,15,38H,9-14,16-18H2,1-2H3,(H,30,35)/t29-/m1/s1" V9F InChIKey InChI 1.06 OKUHUZQAZMDBHT-GDLZYMKVSA-N V9F SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)[N@@]2Cc3n(Cc4ccc(cc4)C(=O)NO)c5ccc(OCCN6CCOCC6)cc5c3[C@@](C)(C2)C1=O" V9F SMILES CACTVS 3.385 "CN1C(=O)[N]2Cc3n(Cc4ccc(cc4)C(=O)NO)c5ccc(OCCN6CCOCC6)cc5c3[C](C)(C2)C1=O" V9F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@]12CN(Cc3c1c4cc(ccc4n3Cc5ccc(cc5)C(=O)NO)OCCN6CCOCC6)C(=O)N(C2=O)C" V9F SMILES "OpenEye OEToolkits" 2.0.7 "CC12CN(Cc3c1c4cc(ccc4n3Cc5ccc(cc5)C(=O)NO)OCCN6CCOCC6)C(=O)N(C2=O)C" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site V9F "Create component" 2023-09-11 PDBE V9F "Initial release" 2024-08-07 RCSB #