data_VAW
#

_chem_comp.id                                   VAW
_chem_comp.name                                 "(2S,3R,4S)-methyl 4-(2-(2-(1H-indol-3-yl)ethylamino)ethyl)-2-((2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yloxy)-3-vinyl-3,4-dihydro-2H-pyran-5-carboxylate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H36 N2 O9"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "methyl (2S,3R,4S)-3-ethenyl-2-(beta-D-glucopyranosyloxy)-4-(2-{[2-(1H-indol-3-yl)ethyl]amino}ethyl)-3,4-dihydro-2H-pyran-5-carboxylate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2007-09-04
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  ?
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       532.583
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VAW
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2VAQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VAW  CBD   CBD   C  0  1  Y  N  N  100.814  -0.510  -0.282  -6.993  -1.069   0.443  CBD   VAW   1  
VAW  CAM   CAM   C  0  1  Y  N  N  101.808  -1.446  -0.547  -6.958  -0.696   1.788  CAM   VAW   2  
VAW  CAK   CAK   C  0  1  Y  N  N  101.829  -2.687   0.098  -7.706  -1.382   2.702  CAK   VAW   3  
VAW  CAJ   CAJ   C  0  1  Y  N  N  100.843  -3.006   1.020  -8.501  -2.449   2.305  CAJ   VAW   4  
VAW  CAL   CAL   C  0  1  Y  N  N   99.841  -2.076   1.288  -8.550  -2.834   0.983  CAL   VAW   5  
VAW  CBC   CBC   C  0  1  Y  N  N   99.831  -0.837   0.641  -7.797  -2.149   0.035  CBC   VAW   6  
VAW  NAU   NAU   N  0  1  Y  N  N   99.010   0.212   0.725  -7.635  -2.285  -1.326  NAU   VAW   7  
VAW  CAN   CAN   C  0  1  Y  N  N   99.422   1.169  -0.116  -6.764  -1.336  -1.787  CAN   VAW   8  
VAW  CBB   CBB   C  0  1  Y  N  N  100.524   0.781  -0.745  -6.344  -0.567  -0.771  CBB   VAW   9  
VAW  CAR   CAR   C  0  1  N  N  N  101.264   1.641  -1.765  -5.386   0.593  -0.860  CAR   VAW  10  
VAW  CAP   CAP   C  0  1  N  N  N  102.394   2.459  -1.133  -4.167   0.163  -0.698  CAP   VAW  11  
VAW  NAT   NAT   N  0  1  N  N  N  102.792   1.887   0.179  -3.233   1.293  -0.785  NAT   VAW  12  
VAW  CAQ   CAQ   C  0  1  N  N  N  104.225   1.641   0.066  -1.860   0.867  -0.481  CAQ   VAW  13  
VAW  CAS   CAS   C  0  1  N  N  N  104.933   1.571   1.408  -1.077   1.909  -0.456  CAS   VAW  14  
VAW  CBJ   CBJ   C  0  1  N  N  S  104.559   0.258   2.031   0.363   1.459  -0.202  CBJ   VAW  15  
VAW  CBH   CBH   C  0  1  N  N  R  105.573  -0.877   1.913   0.795   0.487  -1.305  CBH   VAW  16  
VAW  CAH   CAH   C  0  1  N  N  N  105.619  -1.542   0.538   0.433   1.055  -2.653  CAH   VAW  17  
VAW  CAA   CAA   C  0  1  N  N  N  105.979  -0.831  -0.592  -0.380   0.399  -3.443  CAA   VAW  18  
VAW  CBA   CBA   C  0  1  N  N  N  104.392   0.363   3.540   1.271   2.658  -0.204  CBA   VAW  19  
VAW  CAZ   CAZ   C  0  1  N  N  N  103.075   0.914   4.062   0.845   3.836   0.456  CAZ   VAW  20  
VAW  OAC   OAC   O  0  1  N  N  N  102.809   1.004   5.276   1.505   4.854   0.369  OAC   VAW  21  
VAW  OAV   OAV   O  0  1  N  N  N  102.256   1.338   3.022  -0.292   3.829   1.183  OAV   VAW  22  
VAW  CAB   CAB   C  0  1  N  N  N  100.960   0.815   2.855  -0.721   5.078   1.727  CAB   VAW  23  
VAW  CAI   CAI   C  0  1  N  N  N  105.401  -0.118   4.367   2.464   2.652  -0.804  CAI   VAW  24  
VAW  OAW   OAW   O  0  1  N  N  N  106.596  -0.638   3.893   2.948   1.586  -1.461  OAW   VAW  25  
VAW  CBK   CBK   C  0  1  N  N  S  106.915  -0.451   2.520   2.316   0.301  -1.213  CBK   VAW  26  
VAW  O1    O1    O  0  1  N  N  N  107.930  -1.423   2.431   2.667  -0.164   0.092  O1    VAW  27  
VAW  C1    C1    C  0  1  N  N  S  109.168  -0.988   2.981   4.053  -0.477   0.245  C1    VAW  28  
VAW  O5    O5    O  0  1  N  N  N  109.818  -0.021   2.160   4.387  -1.582  -0.597  O5    VAW  29  
VAW  C5    C5    C  0  1  N  N  R  110.922   0.504   2.819   5.764  -1.963  -0.540  C5    VAW  30  
VAW  C6    C6    C  0  1  N  N  N  111.352   1.774   2.092   6.010  -3.131  -1.497  C6    VAW  31  
VAW  O6    O6    O  0  1  N  N  N  111.525   1.582   0.666   5.792  -2.700  -2.841  O6    VAW  32  
VAW  C4    C4    C  0  1  N  N  S  111.989  -0.577   2.753   6.115  -2.389   0.888  C4    VAW  33  
VAW  O4    O4    O  0  1  N  N  N  112.984  -0.201   3.654   7.505  -2.715   0.960  O4    VAW  34  
VAW  C3    C3    C  0  1  N  N  S  111.468  -1.930   3.251   5.809  -1.235   1.847  C3    VAW  35  
VAW  O3    O3    O  0  1  N  N  N  112.347  -2.990   2.881   6.065  -1.649   3.191  O3    VAW  36  
VAW  C2    C2    C  0  1  N  N  R  110.046  -2.207   2.737   4.335  -0.843   1.704  C2    VAW  37  
VAW  O2    O2    O  0  1  N  N  N  109.483  -3.362   3.379   4.056   0.280   2.541  O2    VAW  38  
VAW  HAM   HAM   H  0  1  N  N  N  102.579  -1.210  -1.265  -6.342   0.133   2.104  HAM   VAW  39  
VAW  HAK   HAK   H  0  1  N  N  N  102.613  -3.397  -0.122  -7.678  -1.093   3.742  HAK   VAW  40  
VAW  HAJ   HAJ   H  0  1  N  N  N  100.852  -3.962   1.523  -9.086  -2.983   3.039  HAJ   VAW  41  
VAW  HAL   HAL   H  0  1  N  N  N   99.066  -2.314   2.001  -9.171  -3.666   0.684  HAL   VAW  42  
VAW  HAU   HAU   H  0  1  N  N  N   98.211   0.274   1.323  -8.072  -2.954  -1.875  HAU   VAW  43  
VAW  HAN   HAN   H  0  1  N  N  N   98.929   2.119  -0.261  -6.462  -1.221  -2.818  HAN   VAW  44  
VAW  HAR1  1HAR  H  0  0  N  N  N  101.698   0.979  -2.529  -5.478   1.065  -1.838  HAR1  VAW  45  
VAW  HAR2  2HAR  H  0  0  N  N  N  100.540   2.347  -2.198  -5.622   1.320  -0.082  HAR2  VAW  46  
VAW  HAP1  1HAP  H  0  0  N  N  N  103.263   2.449  -1.807  -4.075  -0.309   0.280  HAP1  VAW  47  
VAW  HAP2  2HAP  H  0  0  N  N  N  102.039   3.488  -0.976  -3.931  -0.564  -1.475  HAP2  VAW  48  
VAW  HAT   HAT   H  0  1  N  N  N  102.596   2.526   0.922  -3.282   1.734  -1.691  HAT   VAW  49  
VAW  HAQ1  1HAQ  H  0  0  N  N  N  104.369   0.679  -0.448  -1.839   0.373   0.490  HAQ1  VAW  50  
VAW  HAQ2  2HAQ  H  0  0  N  N  N  104.659   2.486  -0.489  -1.517   0.174  -1.249  HAQ2  VAW  51  
VAW  HAS1  1HAS  H  0  0  N  N  N  106.022   1.632   1.269  -1.132   2.429  -1.412  HAS1  VAW  52  
VAW  HAS2  2HAS  H  0  0  N  N  N  104.635   2.410   2.053  -1.393   2.581   0.342  HAS2  VAW  53  
VAW  HBJ   HBJ   H  0  1  N  N  N  103.645   0.030   1.463   0.423   0.960   0.765  HBJ   VAW  54  
VAW  HBH   HBH   H  0  1  N  N  N  105.226  -1.721   2.527   0.298  -0.473  -1.165  HBH   VAW  55  
VAW  HAH   HAH   H  0  1  N  N  N  105.365  -2.588   0.447   0.845   2.002  -2.968  HAH   VAW  56  
VAW  HBK   HBK   H  0  1  N  N  N  107.243   0.503   2.081   2.644  -0.421  -1.961  HBK   VAW  57  
VAW  HAA1  1HAA  H  0  0  N  N  N  105.938  -1.507  -1.433  -0.640   0.806  -4.409  HAA1  VAW  58  
VAW  HAA2  2HAA  H  0  0  N  N  N  106.252   0.213  -0.627  -0.792  -0.549  -3.128  HAA2  VAW  59  
VAW  HAI   HAI   H  0  1  N  N  N  105.246  -0.085   5.435   3.067   3.547  -0.760  HAI   VAW  60  
VAW  HAB1  1HAB  H  0  0  N  N  N  100.489   0.679   3.840   0.082   5.509   2.326  HAB1  VAW  61  
VAW  HAB2  2HAB  H  0  0  N  N  N  100.358   1.513   2.255  -0.975   5.761   0.916  HAB2  VAW  62  
VAW  HAB3  3HAB  H  0  0  N  N  N  101.020  -0.155   2.340  -1.598   4.919   2.356  HAB3  VAW  63  
VAW  H1    H1    H  0  1  N  N  N  109.020  -0.600   3.999   4.653   0.389  -0.036  H1    VAW  64  
VAW  H2    H2    H  0  1  N  N  N  110.096  -2.410   1.657   3.705  -1.683   1.997  H2    VAW  65  
VAW  H5    H5    H  0  1  N  N  N  110.723   0.774   3.867   6.387  -1.117  -0.831  H5    VAW  66  
VAW  H6C1  1H6C  H  0  0  N  N  N  110.576   2.539   2.246   7.037  -3.479  -1.388  H6C1  VAW  67  
VAW  H6C2  2H6C  H  0  0  N  N  N  112.326   2.077   2.505   5.324  -3.945  -1.261  H6C2  VAW  68  
VAW  H4    H4    H  0  1  N  N  N  112.326  -0.678   1.711   5.522  -3.261   1.164  H4    VAW  69  
VAW  H6    H6    H  0  1  N  N  N  111.563   2.427   0.234   5.931  -3.391  -3.503  H6    VAW  70  
VAW  HA    HA    H  0  1  N  N  N  113.811  -0.115   3.195   7.798  -2.994   1.839  HA    VAW  71  
VAW  H3    H3    H  0  1  N  N  N  111.431  -1.881   4.349   6.441  -0.380   1.602  H3    VAW  72  
VAW  HB    HB    H  0  1  N  N  N  112.542  -2.931   1.953   5.893  -0.966   3.853  HB    VAW  73  
VAW  HC    HC    H  0  1  N  N  N  109.359  -4.052   2.738   3.140   0.586   2.497  HC    VAW  74  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VAW  CBD  CAM   SING  Y  N   1  
VAW  CBD  CBC   DOUB  Y  N   2  
VAW  CBD  CBB   SING  Y  N   3  
VAW  CAM  CAK   DOUB  Y  N   4  
VAW  CAK  CAJ   SING  Y  N   5  
VAW  CAJ  CAL   DOUB  Y  N   6  
VAW  CAL  CBC   SING  Y  N   7  
VAW  CBC  NAU   SING  Y  N   8  
VAW  NAU  CAN   SING  Y  N   9  
VAW  CAN  CBB   DOUB  Y  N  10  
VAW  CBB  CAR   SING  N  N  11  
VAW  CAR  CAP   SING  N  N  12  
VAW  CAP  NAT   SING  N  N  13  
VAW  NAT  CAQ   SING  N  N  14  
VAW  CAQ  CAS   SING  N  N  15  
VAW  CAS  CBJ   SING  N  N  16  
VAW  CBJ  CBH   SING  N  N  17  
VAW  CBJ  CBA   SING  N  N  18  
VAW  CBH  CAH   SING  N  N  19  
VAW  CBH  CBK   SING  N  N  20  
VAW  CAH  CAA   DOUB  N  N  21  
VAW  CBA  CAZ   SING  N  N  22  
VAW  CBA  CAI   DOUB  N  N  23  
VAW  CAZ  OAC   DOUB  N  N  24  
VAW  CAZ  OAV   SING  N  N  25  
VAW  OAV  CAB   SING  N  N  26  
VAW  CAI  OAW   SING  N  N  27  
VAW  OAW  CBK   SING  N  N  28  
VAW  CBK  O1    SING  N  N  29  
VAW  O1   C1    SING  N  N  30  
VAW  C1   O5    SING  N  N  31  
VAW  C1   C2    SING  N  N  32  
VAW  O5   C5    SING  N  N  33  
VAW  C5   C6    SING  N  N  34  
VAW  C5   C4    SING  N  N  35  
VAW  C6   O6    SING  N  N  36  
VAW  C4   O4    SING  N  N  37  
VAW  C4   C3    SING  N  N  38  
VAW  C3   O3    SING  N  N  39  
VAW  C3   C2    SING  N  N  40  
VAW  C2   O2    SING  N  N  41  
VAW  CAM  HAM   SING  N  N  42  
VAW  CAK  HAK   SING  N  N  43  
VAW  CAJ  HAJ   SING  N  N  44  
VAW  CAL  HAL   SING  N  N  45  
VAW  NAU  HAU   SING  N  N  46  
VAW  CAN  HAN   SING  N  N  47  
VAW  CAR  HAR1  SING  N  N  48  
VAW  CAR  HAR2  SING  N  N  49  
VAW  CAP  HAP1  SING  N  N  50  
VAW  CAP  HAP2  SING  N  N  51  
VAW  NAT  HAT   SING  N  N  52  
VAW  CAQ  HAQ1  SING  N  N  53  
VAW  CAQ  HAQ2  SING  N  N  54  
VAW  CAS  HAS1  SING  N  N  55  
VAW  CAS  HAS2  SING  N  N  56  
VAW  CBJ  HBJ   SING  N  N  57  
VAW  CBH  HBH   SING  N  N  58  
VAW  CAH  HAH   SING  N  N  59  
VAW  CBK  HBK   SING  N  N  60  
VAW  CAA  HAA1  SING  N  N  61  
VAW  CAA  HAA2  SING  N  N  62  
VAW  CAI  HAI   SING  N  N  63  
VAW  CAB  HAB1  SING  N  N  64  
VAW  CAB  HAB2  SING  N  N  65  
VAW  CAB  HAB3  SING  N  N  66  
VAW  C1   H1    SING  N  N  67  
VAW  C2   H2    SING  N  N  68  
VAW  C5   H5    SING  N  N  69  
VAW  C6   H6C1  SING  N  N  70  
VAW  C6   H6C2  SING  N  N  71  
VAW  C4   H4    SING  N  N  72  
VAW  O6   H6    SING  N  N  73  
VAW  O4   HA    SING  N  N  74  
VAW  C3   H3    SING  N  N  75  
VAW  O3   HB    SING  N  N  76  
VAW  O2   HC    SING  N  N  77  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VAW  SMILES            ACDLabs               10.04  "O=C(OC)C2=COC(OC1OC(C(O)C(O)C1O)CO)C(\C=C)C2CCNCCc4c3ccccc3nc4"  
VAW  SMILES_CANONICAL  CACTVS                3.341  "COC(=O)C1=CO[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](C=C)[C@@H]1CCNCCc3c[nH]c4ccccc34"  
VAW  SMILES            CACTVS                3.341  "COC(=O)C1=CO[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH](C=C)[CH]1CCNCCc3c[nH]c4ccccc34"  
VAW  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "COC(=O)C1=CO[C@H]([C@@H]([C@@H]1CCNCCc2c[nH]c3c2cccc3)C=C)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O"  
VAW  SMILES            "OpenEye OEToolkits"  1.5.0  "COC(=O)C1=COC(C(C1CCNCCc2c[nH]c3c2cccc3)C=C)OC4C(C(C(C(O4)CO)O)O)O"  
VAW  InChI             InChI                 1.03   "InChI=1S/C27H36N2O9/c1-3-16-18(9-11-28-10-8-15-12-29-20-7-5-4-6-17(15)20)19(25(34)35-2)14-36-26(16)38-27-24(33)23(32)22(31)21(13-30)37-27/h3-7,12,14,16,18,21-24,26-33H,1,8-11,13H2,2H3/t16-,18+,21-,22-,23+,24-,26+,27+/m1/s1"  
VAW  InChIKey          InChI                 1.03   MYFRJCYMRYXZQB-JVARDMDOSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VAW  "SYSTEMATIC NAME"  ACDLabs               10.04  "methyl (2S,3R,4S)-3-ethenyl-2-(beta-D-glucopyranosyloxy)-4-(2-{[2-(1H-indol-3-yl)ethyl]amino}ethyl)-3,4-dihydro-2H-pyran-5-carboxylate"  
VAW  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "methyl (4S,5R,6S)-5-ethenyl-4-[2-[2-(1H-indol-3-yl)ethylamino]ethyl]-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,6-dihydro-4H-pyran-3-carboxylate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VAW  "Create component"      2007-09-04  PDBJ  
VAW  "Modify aromatic_flag"  2011-06-04  RCSB  
VAW  "Modify descriptor"     2011-06-04  RCSB  
VAW  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     VAW
_pdbx_chem_comp_synonyms.name        "methyl (2S,3R,4S)-3-ethenyl-2-(beta-D-glucopyranosyloxy)-4-(2-{[2-(1H-indol-3-yl)ethyl]amino}ethyl)-3,4-dihydro-2H-pyran-5-carboxylate"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##