data_VB3
#
_chem_comp.id VB3
_chem_comp.name "2-({[(2S)-1-cyclohexylpropan-2-yl]amino}methyl)phenol"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C16 H25 N O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-05-17
_chem_comp.pdbx_modified_date 2020-11-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 247.376
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code VB3
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6OZ5
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VB3 C01 C1 C 0 1 N N N 14.316 -10.908 -71.787 -0.280 3.274 0.338 C01 VB3 1
VB3 C02 C2 C 0 1 N N S 13.608 -11.593 -70.599 -0.738 1.815 0.379 C02 VB3 2
VB3 C04 C3 C 0 1 N N N 11.148 -11.617 -70.013 1.278 0.621 0.988 C04 VB3 3
VB3 C05 C4 C 0 1 Y N N 10.635 -12.360 -71.282 2.375 -0.268 0.460 C05 VB3 4
VB3 C06 C5 C 0 1 Y N N 10.513 -11.826 -72.548 3.442 0.283 -0.234 C06 VB3 5
VB3 C08 C6 C 0 1 Y N N 10.062 -12.450 -73.685 4.453 -0.537 -0.714 C08 VB3 6
VB3 C09 C7 C 0 1 Y N N 9.668 -13.812 -73.554 4.394 -1.900 -0.500 C09 VB3 7
VB3 C10 C8 C 0 1 Y N N 9.754 -14.459 -72.289 3.329 -2.448 0.192 C10 VB3 8
VB3 C11 C9 C 0 1 Y N N 10.238 -13.716 -71.162 2.321 -1.633 0.672 C11 VB3 9
VB3 C12 C10 C 0 1 N N N 14.590 -11.696 -69.350 -1.965 1.639 -0.518 C12 VB3 10
VB3 C13 C11 C 0 1 N N N 14.322 -12.900 -68.354 -2.497 0.212 -0.380 C13 VB3 11
VB3 C14 C12 C 0 1 N N N 14.452 -14.273 -69.099 -3.004 -0.008 1.047 C14 VB3 12
VB3 C15 C13 C 0 1 N N N 14.382 -15.538 -68.201 -3.537 -1.436 1.184 C15 VB3 13
VB3 C16 C14 C 0 1 N N N 14.758 -15.279 -66.745 -4.686 -1.650 0.196 C16 VB3 14
VB3 C17 C15 C 0 1 N N N 15.821 -14.178 -66.634 -4.179 -1.430 -1.230 C17 VB3 15
VB3 C18 C16 C 0 1 N N N 15.301 -12.816 -67.138 -3.646 -0.002 -1.368 C18 VB3 16
VB3 N03 N1 N 0 1 N N N 12.374 -10.766 -70.255 0.347 0.948 -0.100 N03 VB3 17
VB3 O07 O1 O 0 1 N N N 10.918 -10.431 -72.660 3.497 1.625 -0.444 O07 VB3 18
VB3 H012 H1 H 0 0 N N N 15.213 -11.482 -72.060 0.594 3.399 0.977 H012 VB3 19
VB3 H013 H2 H 0 0 N N N 13.631 -10.866 -72.647 -0.024 3.545 -0.686 H013 VB3 20
VB3 H011 H3 H 0 0 N N N 14.608 -9.887 -71.501 -1.085 3.918 0.693 H011 VB3 21
VB3 H021 H4 H 0 0 N N N 13.302 -12.608 -70.893 -0.995 1.543 1.403 H021 VB3 22
VB3 H042 H5 H 0 0 N N N 10.342 -10.966 -69.643 0.742 0.102 1.783 H042 VB3 23
VB3 H041 H6 H 0 0 N N N 11.393 -12.368 -69.247 1.713 1.539 1.382 H041 VB3 24
VB3 H081 H7 H 0 0 N N N 10.009 -11.933 -74.632 5.284 -0.110 -1.255 H081 VB3 25
VB3 H091 H8 H 0 0 N N N 9.304 -14.354 -74.414 5.181 -2.539 -0.873 H091 VB3 26
VB3 H101 H9 H 0 0 N N N 9.460 -15.492 -72.180 3.285 -3.514 0.359 H101 VB3 27
VB3 H111 H10 H 0 0 N N N 10.302 -14.201 -70.199 1.493 -2.062 1.215 H111 VB3 28
VB3 H121 H11 H 0 0 N N N 15.615 -11.799 -69.735 -2.739 2.346 -0.218 H121 VB3 29
VB3 H122 H12 H 0 0 N N N 14.506 -10.760 -68.778 -1.686 1.825 -1.555 H122 VB3 30
VB3 H131 H13 H 0 0 N N N 13.293 -12.808 -67.977 -1.697 -0.497 -0.595 H131 VB3 31
VB3 H141 H14 H 0 0 N N N 13.637 -14.336 -69.835 -2.186 0.144 1.750 H141 VB3 32
VB3 H142 H15 H 0 0 N N N 15.420 -14.283 -69.622 -3.805 0.700 1.261 H142 VB3 33
VB3 H151 H16 H 0 0 N N N 13.354 -15.928 -68.230 -2.737 -2.145 0.970 H151 VB3 34
VB3 H152 H17 H 0 0 N N N 15.072 -16.292 -68.609 -3.898 -1.593 2.201 H152 VB3 35
VB3 H161 H18 H 0 0 N N N 13.859 -14.967 -66.192 -5.065 -2.667 0.294 H161 VB3 36
VB3 H162 H19 H 0 0 N N N 15.155 -16.206 -66.306 -5.486 -0.941 0.411 H162 VB3 37
VB3 H171 H20 H 0 0 N N N 16.696 -14.468 -67.235 -3.378 -2.138 -1.445 H171 VB3 38
VB3 H172 H21 H 0 0 N N N 16.117 -14.076 -65.580 -4.997 -1.582 -1.934 H172 VB3 39
VB3 H182 H22 H 0 0 N N N 16.167 -12.208 -67.437 -4.446 0.707 -1.154 H182 VB3 40
VB3 H181 H23 H 0 0 N N N 14.775 -12.322 -66.308 -3.285 0.155 -2.385 H181 VB3 41
VB3 H1 H24 H 0 1 N N N 12.564 -10.237 -69.428 -0.021 0.110 -0.525 H1 VB3 42
VB3 H071 H26 H 0 0 N N N 11.208 -10.116 -71.812 3.954 2.114 0.254 H071 VB3 43
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VB3 C08 C09 DOUB Y N 1
VB3 C08 C06 SING Y N 2
VB3 C09 C10 SING Y N 3
VB3 O07 C06 SING N N 4
VB3 C06 C05 DOUB Y N 5
VB3 C10 C11 DOUB Y N 6
VB3 C01 C02 SING N N 7
VB3 C05 C11 SING Y N 8
VB3 C05 C04 SING N N 9
VB3 C02 N03 SING N N 10
VB3 C02 C12 SING N N 11
VB3 N03 C04 SING N N 12
VB3 C12 C13 SING N N 13
VB3 C14 C13 SING N N 14
VB3 C14 C15 SING N N 15
VB3 C13 C18 SING N N 16
VB3 C15 C16 SING N N 17
VB3 C18 C17 SING N N 18
VB3 C16 C17 SING N N 19
VB3 C01 H012 SING N N 20
VB3 C01 H013 SING N N 21
VB3 C01 H011 SING N N 22
VB3 C02 H021 SING N N 23
VB3 C04 H042 SING N N 24
VB3 C04 H041 SING N N 25
VB3 C08 H081 SING N N 26
VB3 C09 H091 SING N N 27
VB3 C10 H101 SING N N 28
VB3 C11 H111 SING N N 29
VB3 C12 H121 SING N N 30
VB3 C12 H122 SING N N 31
VB3 C13 H131 SING N N 32
VB3 C14 H141 SING N N 33
VB3 C14 H142 SING N N 34
VB3 C15 H151 SING N N 35
VB3 C15 H152 SING N N 36
VB3 C16 H161 SING N N 37
VB3 C16 H162 SING N N 38
VB3 C17 H171 SING N N 39
VB3 C17 H172 SING N N 40
VB3 C18 H182 SING N N 41
VB3 C18 H181 SING N N 42
VB3 N03 H1 SING N N 43
VB3 O07 H071 SING N N 44
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VB3 SMILES ACDLabs 12.01 "CC(NCc1ccccc1O)CC2CCCCC2"
VB3 InChI InChI 1.03 "InChI=1S/C16H25NO/c1-13(11-14-7-3-2-4-8-14)17-12-15-9-5-6-10-16(15)18/h5-6,9-10,13-14,17-18H,2-4,7-8,11-12H2,1H3/t13-/m0/s1"
VB3 InChIKey InChI 1.03 IRWBEPDMVHOCPD-ZDUSSCGKSA-N
VB3 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](CC1CCCCC1)NCc2ccccc2O"
VB3 SMILES CACTVS 3.385 "C[CH](CC1CCCCC1)NCc2ccccc2O"
VB3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](CC1CCCCC1)NCc2ccccc2O"
VB3 SMILES "OpenEye OEToolkits" 2.0.7 "CC(CC1CCCCC1)NCc2ccccc2O"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VB3 "SYSTEMATIC NAME" ACDLabs 12.01 "2-({[(2S)-1-cyclohexylpropan-2-yl]amino}methyl)phenol"
VB3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[[(2~{S})-1-cyclohexylpropan-2-yl]amino]methyl]phenol"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VB3 "Create component" 2019-05-17 RCSB
VB3 "Initial release" 2020-11-18 RCSB
##